Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe05g0658 | ATGGATATCTCTATTACAACGATTATTCTGTTCCTCACTTTTCTCTCTCTCTTCTTTTACTTTTGCTTCTTAACTTCAAGCAAGAAATCTCGAAGCCATGAAGGTTTTAGACACTTCCCCATAGTCGGAGTCTTGCCGGTGTTCTTATTGAACCGACGCCATTTTCTGGACTTGACGACGGACGTCCTCAGAAACTGCCGGAAAAACACGGCGGTATTCCGGCGGCCGGGAGGGGTTAGCGGCGTCATGACGGCAAACCCACTTGTGGTAGAGCACATATTGAAGACCCAATTTGAGAAGTTCCCGAAAGGGGAACGCATCACTTCGCTTTTGGGGGAATTTTTGGGGAGTGGAATCTTCAACTCCGACGGCGATGTTTGGAGGGTTCAGAGGAAAACGGCGAGTTATGAATTCAATACCAAATCGCTTAGGAATTTTGTTATGGAGAATGTTAGGGTTGAGATTCAGACGAGGCTGCTTCCTGTTTTGGAGAAGGCTTCTGAAACAGACCGGATTTTGGATATGCAGGACGTTTTGGAGCGATTTGCGTTTGATAATGTTTGCAAATTATCTTTCAATTTTGATCCTGCTTGTCTCGGCGGCCACGACACTGCCGCCGTCGACTTCATGCGCGCTTTTGAGAATGCCGCCACCCTCTCATCCGGCAGATTTAGGTATGTTATTCCTAGTTGGTACAAGATCAAGAGATTTTTCAACTTAGGATCAGAGAAAACCCTAAGGAAATCTATATCCATTGTTCACAAATTTGCAGATGACATTATACGGTCAAGAATGGAGGAGAAATCGACTGATCAAAAGAAGGATCAAGATTTGTTGTCTCGGTTTATGGGAGACAAAGAGAATTCCCCAGAATTCCTTAGAGACATAATCATAAGCTTCATCCTTGCCGGTCGAGACACCACATCTTCAGCTCTAACATGGTTCTTTTGGATCATATCCTCCCGACCGGATATTGTGCAAAAAATCCTTGCAGAACTCGAAACGATCCGGTCAAAAGCTGGTAAGAAAATTGGAGAACCGTACAACATTAACGAACTTCGCGACATGCAGTATCTACAAGCAACACTATCCGAGACTCTCCGATTATACCCACCGGTGCCGGTGGACTCAAAAGCATGCCAGAGCGATGATGTCTTACCAGACGGGACGTTTATTGGGAAGAATTGGTTTGTGATGTATCATTCGTATGCGATGGGAAGAATGGAGAGCATATGGGGGAAGAATTATGACGAATTTTTGCCAGAAAGGTGGCTGGAAAATGGGGTTTGTAGGACGGAGAGCTCGTTTCGATTCCCAATATTTCATGCCGGGCCGAGGATGTGTCCAGGGAAAGACATGGCTTATATACAGATGAAGTCCATAGTTGCAGCTGTGATTGAGAGGTTTGAGGTGGGAGTGGTGGGGAAGAAGAAGACTCCAAAGCATTTGTTATCCTTGACATTGAGGATGGAAAATGGGTTGCAAGTGATGGATAAGAATTAG | 1503 | 45.11 | MDISITTIILFLTFLSLFFYFCFLTSSKKSRSHEGFRHFPIVGVLPVFLLNRRHFLDLTTDVLRNCRKNTAVFRRPGGVSGVMTANPLVVEHILKTQFEKFPKGERITSLLGEFLGSGIFNSDGDVWRVQRKTASYEFNTKSLRNFVMENVRVEIQTRLLPVLEKASETDRILDMQDVLERFAFDNVCKLSFNFDPACLGGHDTAAVDFMRAFENAATLSSGRFRYVIPSWYKIKRFFNLGSEKTLRKSISIVHKFADDIIRSRMEEKSTDQKKDQDLLSRFMGDKENSPEFLRDIIISFILAGRDTTSSALTWFFWIISSRPDIVQKILAELETIRSKAGKKIGEPYNINELRDMQYLQATLSETLRLYPPVPVDSKACQSDDVLPDGTFIGKNWFVMYHSYAMGRMESIWGKNYDEFLPERWLENGVCRTESSFRFPIFHAGPRMCPGKDMAYIQMKSIVAAVIERFEVGVVGKKKTPKHLLSLTLRMENGLQVMDKN | 500 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 10828093 | 10842919 | + | Hsped.05g06580.1 | Hepe05g0658 | 569923 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe05g0658 | 500 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 441 | 450 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Hepe05g0658 | 500 | PRINTS | P450 superfamily signature | 303 | 320 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g0658 | 500 | PRINTS | P450 superfamily signature | 448 | 459 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g0658 | 500 | PRINTS | P450 superfamily signature | 439 | 448 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g0658 | 500 | PRINTS | P450 superfamily signature | 361 | 372 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g0658 | 500 | Gene3D | Cytochrome P450 | 17 | 500 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g0658 | 500 | CDD | CYP86A | 70 | 494 | - | - | |
| Hepe05g0658 | 500 | PRINTS | E-class P450 group I signature | 360 | 378 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g0658 | 500 | PRINTS | E-class P450 group I signature | 292 | 309 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g0658 | 500 | PRINTS | E-class P450 group I signature | 312 | 338 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g0658 | 500 | PRINTS | E-class P450 group I signature | 448 | 471 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g0658 | 500 | PRINTS | E-class P450 group I signature | 438 | 448 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g0658 | 500 | PANTHER | CYTOCHROME P450 | 19 | 494 | - | - | |
| Hepe05g0658 | 500 | SUPERFAMILY | Cytochrome P450 | 27 | 497 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g0658 | 500 | Pfam | Cytochrome P450 | 75 | 482 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe05g0651 | Hepe-Chr5:10710206 | Hepe05g0658 | Hepe-Chr5:10828093 | 3.92e-286 | dispersed | |
| Hepe05g0658 | Hepe-Chr5:10828093 | Hepe06g1954 | Hepe-Chr6:70796351 | 4.40e-132 | dispersed | |
| Hepe05g0653 | Hepe-Chr5:10729991 | Hepe05g0658 | Hepe-Chr5:10828093 | 3.00e-315 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe05g0658 | - | - | - | 0.0 |