Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe05g0675 | ATGGGTAGTAGAACAGTGAAGATTGGTGTAGATGATGTAAACAAAACGGTGAACGGGATGCCTAGCTTTGTTTCTTCGATGCCCACAGCTAATAATTCCATGGGTGCAGAGGGAAGCTCTATTCCTTCATCTCGGATCTCAGACTTAAGAACACTTCAGCAAACTCTTGGATTTCACATAGAAGATGTAGACCTTACTAGAAATCCTTTGTATAATCAAATGAAGTCAAATAGTTCGACTCTGAACAACAACATCCAGTTTAGTTCTTTAATTAAGCCACTTGCATCCACTGATGTAAGCCTGCCAAGTGCTATCATGGGGTCTCAAACATTGCCATTACAGAAAGAATCAAATCCAAATTTTGTTTCTACGTCTGGTGGTCCTCGTGAAAACTGGGGAGAGTCTAACATGGCAGATACCAGCACAAGAACTGATACCTCCACAGATGACACAGATGACAAAAGCCAAAGGCTTGACAAGGATCAAGGAAACTCACTTGTGGCATATGATTCTAGCAACAAATCAAAAGAAAAAACAGCAGATCAGAAGCATCCCTTTCAGACCTTACGAAGGCTTGCCCAAAATCGTGAAGCAGCTAGAAAAAGTCGTTTAAGGAAAAAAGCGTATGTGCAGCAGCTCGAAAGTAGCAGGCTGAAGCTTACTTCGCTTGAGCAAGAACTCCAGCGGGCCCGTCAGCAGGGTATATTTATTTCAAGTTCTGGAGACCAAACTCATTCCATGAGTGGAAATGGGGCCCTAGCATTTGATGTAGAATATTCACGTTGGTTGGAGGAGCATAACAGGCTGATAAATGAGCTTAGAGCTGCAGTAAATTCACATGCGGGTGACACTGAACTTCGAACTATTGTTGATAATGTGACTGCACAGTTCGATGATATTTTCAGGTTGAAAGGCATTGCAGCCAAAGCTGATGTGTTCCACATCTTGTCAGGAATGTGGAAGACACCAGCAGAGCGGTGTTTCCTGTGGATTGGTGGCTTTCGTTCATCCGAAATCCTAAAGCTTCTTGTAAACCAATTGGAGCCTTTGACTGAGCAGCAACTAATGGACATCTGCAATCTGCAACAGTTATCACAACAGGCAGAAGATGCTCTCTCACAAGGAATGGATGCATTGCAGCAATCCTTGGCTGAAACATTGGCCAGTGGTACACCTGCGGCGGCAGGTTCATCTGGGAATGTGGCAAATTATATGGGTCAAATGGCCATGGCAATGGGAAAGCTTGGAACTCTTGAAGGCTTCCTACGCCAGGCTGATAATCTTCGTCAACAAACACTTCAACAAATGCATCGCACATTGACAACCCGGCAATCAGCCCGTGCACTTCTTGCAATAAACGACTATTTCTCCCGCCTTAGAGCCCTCAGCTCTCTCTGGCTTGCACGGCCACGAGAGTGA | 1419 | 44.68 | MGSRTVKIGVDDVNKTVNGMPSFVSSMPTANNSMGAEGSSIPSSRISDLRTLQQTLGFHIEDVDLTRNPLYNQMKSNSSTLNNNIQFSSLIKPLASTDVSLPSAIMGSQTLPLQKESNPNFVSTSGGPRENWGESNMADTSTRTDTSTDDTDDKSQRLDKDQGNSLVAYDSSNKSKEKTADQKHPFQTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTSLEQELQRARQQGIFISSSGDQTHSMSGNGALAFDVEYSRWLEEHNRLINELRAAVNSHAGDTELRTIVDNVTAQFDDIFRLKGIAAKADVFHILSGMWKTPAERCFLWIGGFRSSEILKLLVNQLEPLTEQQLMDICNLQQLSQQAEDALSQGMDALQQSLAETLASGTPAAAGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRTLTTRQSARALLAINDYFSRLRALSSLWLARPRE | 472 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 11186778 | 11201789 | - | Hsped.05g06750.1 | Hepe05g0675 | 569940 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe05g0675 | 472 | ProSiteProfiles | DOG1 domain profile. | 252 | 469 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) | |
Hepe05g0675 | 472 | Coils | Coil | 206 | 233 | - | - | |
Hepe05g0675 | 472 | Gene3D | - | 187 | 237 | - | - | |
Hepe05g0675 | 472 | MobiDBLite | consensus disorder prediction | 110 | 144 | - | - | |
Hepe05g0675 | 472 | Pfam | Seed dormancy control | 270 | 344 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) | |
Hepe05g0675 | 472 | CDD | bZIP_HBP1b-like | 187 | 239 | - | - | |
Hepe05g0675 | 472 | MobiDBLite | consensus disorder prediction | 110 | 185 | - | - | |
Hepe05g0675 | 472 | FunFam | BZIP family transcription factor | 186 | 235 | - | - | |
Hepe05g0675 | 472 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 141 | 472 | - | - | |
Hepe05g0675 | 472 | SUPERFAMILY | Leucine zipper domain | 189 | 230 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe05g0675 | 472 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 190 | 229 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe05g0675 | 472 | SMART | brlzneu | 179 | 246 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe05g0675 | 472 | MobiDBLite | consensus disorder prediction | 145 | 160 | - | - | |
Hepe05g0675 | 472 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 190 | 205 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe05g0675 | 472 | Pfam | bZIP transcription factor | 187 | 227 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe05g0675 | Hepe-Chr5:11186778 | Hepe10g0543 | Hepe-Chr10:6451084 | 5.06e-143 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55600 | PF14144 | DOG1 | 8.40E-30 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe05g0675 | K14431 | - | csv:101219149 | 830.476 |