Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0675 ATGGGTAGTAGAACAGTGAAGATTGGTGTAGATGATGTAAACAAAACGGTGAACGGGATGCCTAGCTTTGTTTCTTCGATGCCCACAGCTAATAATTCCATGGGTGCAGAGGGAAGCTCTATTCCTTCATCTCGGATCTCAGACTTAAGAACACTTCAGCAAACTCTTGGATTTCACATAGAAGATGTAGACCTTACTAGAAATCCTTTGTATAATCAAATGAAGTCAAATAGTTCGACTCTGAACAACAACATCCAGTTTAGTTCTTTAATTAAGCCACTTGCATCCACTGATGTAAGCCTGCCAAGTGCTATCATGGGGTCTCAAACATTGCCATTACAGAAAGAATCAAATCCAAATTTTGTTTCTACGTCTGGTGGTCCTCGTGAAAACTGGGGAGAGTCTAACATGGCAGATACCAGCACAAGAACTGATACCTCCACAGATGACACAGATGACAAAAGCCAAAGGCTTGACAAGGATCAAGGAAACTCACTTGTGGCATATGATTCTAGCAACAAATCAAAAGAAAAAACAGCAGATCAGAAGCATCCCTTTCAGACCTTACGAAGGCTTGCCCAAAATCGTGAAGCAGCTAGAAAAAGTCGTTTAAGGAAAAAAGCGTATGTGCAGCAGCTCGAAAGTAGCAGGCTGAAGCTTACTTCGCTTGAGCAAGAACTCCAGCGGGCCCGTCAGCAGGGTATATTTATTTCAAGTTCTGGAGACCAAACTCATTCCATGAGTGGAAATGGGGCCCTAGCATTTGATGTAGAATATTCACGTTGGTTGGAGGAGCATAACAGGCTGATAAATGAGCTTAGAGCTGCAGTAAATTCACATGCGGGTGACACTGAACTTCGAACTATTGTTGATAATGTGACTGCACAGTTCGATGATATTTTCAGGTTGAAAGGCATTGCAGCCAAAGCTGATGTGTTCCACATCTTGTCAGGAATGTGGAAGACACCAGCAGAGCGGTGTTTCCTGTGGATTGGTGGCTTTCGTTCATCCGAAATCCTAAAGCTTCTTGTAAACCAATTGGAGCCTTTGACTGAGCAGCAACTAATGGACATCTGCAATCTGCAACAGTTATCACAACAGGCAGAAGATGCTCTCTCACAAGGAATGGATGCATTGCAGCAATCCTTGGCTGAAACATTGGCCAGTGGTACACCTGCGGCGGCAGGTTCATCTGGGAATGTGGCAAATTATATGGGTCAAATGGCCATGGCAATGGGAAAGCTTGGAACTCTTGAAGGCTTCCTACGCCAGGCTGATAATCTTCGTCAACAAACACTTCAACAAATGCATCGCACATTGACAACCCGGCAATCAGCCCGTGCACTTCTTGCAATAAACGACTATTTCTCCCGCCTTAGAGCCCTCAGCTCTCTCTGGCTTGCACGGCCACGAGAGTGA 1419 44.68 MGSRTVKIGVDDVNKTVNGMPSFVSSMPTANNSMGAEGSSIPSSRISDLRTLQQTLGFHIEDVDLTRNPLYNQMKSNSSTLNNNIQFSSLIKPLASTDVSLPSAIMGSQTLPLQKESNPNFVSTSGGPRENWGESNMADTSTRTDTSTDDTDDKSQRLDKDQGNSLVAYDSSNKSKEKTADQKHPFQTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTSLEQELQRARQQGIFISSSGDQTHSMSGNGALAFDVEYSRWLEEHNRLINELRAAVNSHAGDTELRTIVDNVTAQFDDIFRLKGIAAKADVFHILSGMWKTPAERCFLWIGGFRSSEILKLLVNQLEPLTEQQLMDICNLQQLSQQAEDALSQGMDALQQSLAETLASGTPAAAGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRTLTTRQSARALLAINDYFSRLRALSSLWLARPRE 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 11186778 11201789 - Hsped.05g06750.1 Hepe05g0675 569940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0675 472 ProSiteProfiles DOG1 domain profile. 252 469 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Hepe05g0675 472 Coils Coil 206 233 - -
Hepe05g0675 472 Gene3D - 187 237 - -
Hepe05g0675 472 MobiDBLite consensus disorder prediction 110 144 - -
Hepe05g0675 472 Pfam Seed dormancy control 270 344 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Hepe05g0675 472 CDD bZIP_HBP1b-like 187 239 - -
Hepe05g0675 472 MobiDBLite consensus disorder prediction 110 185 - -
Hepe05g0675 472 FunFam BZIP family transcription factor 186 235 - -
Hepe05g0675 472 PANTHER TRANSCRIPTION FACTOR TGA9 141 472 - -
Hepe05g0675 472 SUPERFAMILY Leucine zipper domain 189 230 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe05g0675 472 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 190 229 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe05g0675 472 SMART brlzneu 179 246 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe05g0675 472 MobiDBLite consensus disorder prediction 145 160 - -
Hepe05g0675 472 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 190 205 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe05g0675 472 Pfam bZIP transcription factor 187 227 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0675 Hepe-Chr5:11186778 Hepe10g0543 Hepe-Chr10:6451084 5.06e-143 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55600 PF14144 DOG1 8.40E-30 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0675 K14431 - csv:101219149 830.476