Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0710 ATGGCTATGGCTATGGCTGCCGATTCTCAGTTCCATGTTCTCGCCGTCGATGATAGCATCATAGATCGAAAACTCATCGAAAGACTTCTCAAAACCTCCTCCTATCAAGTTACTACTGTTGATTCTGGTAGCAAGGCCTTGGAATTTCTGGGTTTGATTCGAGAAGATGAACATATGAACTTCAATTCCCCTTCTTCTTATTTGAATCATCAGGAAGTAGAAGTTAATCTTATCATTACTGATTACTGTATGCCTGGGATGACTGGCTTCGATTTGCTCAAGAAACTTAAGGAATCGACGTCTCTAAGAAACATACCAGTGGTGATAATGTCATCTGAAAACGTACCTTCGAGAATCAACAGATGTTTGGAAGAAGGAGCGGAAGAGTTCTTCCTGAAGCCAGTACGATTGTGCGATGTGAATAAACTGAAACCGCACATGATGAAGAGGAAATTGAAGGATCAAAATCAAGAAGACGAGGAAGAAGAAGAAACGACGGAGGCCGAATTCGAATCGGTACAACAATTACAGGTGCAGATTAACGGTAAGAAGAGAAAGGCGGTCATGGAAGGAGTGGGAGCGGAGAGAAGAAGAAGAAACTACAACAACAATAGCAATGGCGTTGCGACTGTGATTTGA 639 42.25 MAMAMAADSQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIREDEHMNFNSPSSYLNHQEVEVNLIITDYCMPGMTGFDLLKKLKESTSLRNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRLCDVNKLKPHMMKRKLKDQNQEDEEEEETTEAEFESVQQLQVQINGKKRKAVMEGVGAERRRRNYNNNSNGVATVI 212
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 12677465 12679484 + Hsped.05g07100.1 Hepe05g0710 569975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0710 212 MobiDBLite consensus disorder prediction 150 175 - -
Hepe05g0710 212 Pfam Response regulator receiver domain 13 137 IPR001789 GO:0000160(InterPro)
Hepe05g0710 212 SUPERFAMILY CheY-like 10 148 IPR011006 -
Hepe05g0710 212 SMART REC_2 11 143 IPR001789 GO:0000160(InterPro)
Hepe05g0710 212 Coils Coil 149 176 - -
Hepe05g0710 212 CDD REC_typeA_ARR 13 143 - -
Hepe05g0710 212 Gene3D - 12 208 - -
Hepe05g0710 212 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 177 IPR045279 GO:0009736(InterPro)
Hepe05g0710 212 MobiDBLite consensus disorder prediction 198 212 - -
Hepe05g0710 212 ProSiteProfiles Response regulatory domain profile. 12 148 IPR001789 GO:0000160(InterPro)
Hepe05g0710 212 MobiDBLite consensus disorder prediction 191 212 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0710 Hepe-Chr5:12677465 Hepe09g0164 Hepe-Chr9:1312143 1.05e-49 dispersed
Hepe01g0637 Hepe-Chr1:68251939 Hepe05g0710 Hepe-Chr5:12677465 9.55e-52 transposed
Hepe01g0986 Hepe-Chr1:74485700 Hepe05g0710 Hepe-Chr5:12677465 1.04e-67 transposed
Hepe02g2525 Hepe-Chr2:71971938 Hepe05g0710 Hepe-Chr5:12677465 1.35e-67 transposed
Hepe04g0485 Hepe-Chr4:56344491 Hepe05g0710 Hepe-Chr5:12677465 5.61e-75 transposed
Hepe02g2242 Hepe-Chr2:63796930 Hepe05g0710 Hepe-Chr5:12677465 3.90e-55 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55601 PF00072 Response_reg 1.00E-18 CL0304 Hepe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0710 K14492 - csv:101220810 284.263