Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0938 ATGGAGTTTGTAGCCGAGAAGAAGGATTTTGATTCTGCAATCGACAACAACAAGCTCAGCTCTGCCCAAGCAGTTCTTGATTCTTCTTATTCACCCTCATTCGCTCCTGATGACACTGGTAGTAATAACAATTCCAAAGAAGCTGAAGATTTAAGTGAACGCGTAGCTCGAGACCTCAAAGATGGCCTTCATCCCCTAAAGCACAAGTTTGCATTTTGGTACACTCGTCGAACGCCTGGAGTTCGGACTCAAACATCATATGAGGACAACATAAAAAAGATCGTGGACTTTAGCTCGGTTGAAGGGTTTTGGGTAAGCTATTGCCATTTGGCTCGTCCTTCTTCATTGCCAAGCCCAACAGATCTGCATCTCTTTAAGGAAGGAATCCGCCCACTGTGGGAGGATTCTGCCAACTGCAATGGTGGAAAATGGATAATACGATTTAAGAAAGCTGTATCTGGTCGATTTTGGGAAGATTTGGCTCTTGCATTAGTGGGCGACCAGCTTGATTTCGGTGATAACATATGTGGTGCCGTGCTTAGCATTCGTTTCAACGAGGATATTTTGAGTGTCTGGAACCGCAATGCATCTGATCATCAGGCGGTTATGGGTCTGCGAGATTCGATCAAACGGCACTTAAAGCTCCCGCATGGGTACGTAATGGAATACAAACCCCACGATGCGTCTCTGCGTGATAACTCGTCATACAGAAACACATGGTTGCGAGGATGGCGGATTCACTGTCAAATCATGTGGCTAAACATTGGATCCAGCAGAGGCTCCGGCCGAGGACGAGAGGAAACTGGCGCTGCGGGATCTACAGATTATGGATGGAAGGAAATTGGGCTGAAGGGAGGAGGGAATGGGCTTAGTGTTAATGAGAATAGGCTGGATTTCAAATCAACAATGGGTTTGAAAGAGGTGGCTTTGGGTATAAACAAACAACGGTTAAAAAGATCGATCAAAGGGGCGATTGGCAGGAAAGAACAACAGATAGAGGCTCTTTCTAGGGTTCAGGGGCCGAACTGGCGGAAGGAGTCCCGATTGGCAGAGCAAGAGTTAGAGATTCTGTTGGAGGAGGAGGAAATTTATTGGAAACAGAGAGCGAGAGAAGATTGGTTGGAATGTGGGGATAGGAACACCAAGTGGTTTCATCTGAGGGCTAGCCGACGTCGTCGAACCAATAGGATTGAAGGACTAAAGGATGAAAATGGTGTTTGGATAGAGGAGGAGTTTTCGCTAGTAGGTTTGGCTAATTCTTATTTTCAAAAGTTGTTCAATTCCCATAATCTGGATGAGGGTAGCATTCTGACTACTATTGAGGCGATCCCTTCCTCCATTTCGGAGGATCAAAATATCAATTTAACTAGACCTTTTACGAGATCGGAGGTCAAGGAGGCCTTGAAGCAAAAAGTTACACAAGTCCTCAATTTAAATTAA 1440 45.35 MEFVAEKKDFDSAIDNNKLSSAQAVLDSSYSPSFAPDDTGSNNNSKEAEDLSERVARDLKDGLHPLKHKFAFWYTRRTPGVRTQTSYEDNIKKIVDFSSVEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKAVSGRFWEDLALALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRGWRIHCQIMWLNIGSSRGSGRGREETGAAGSTDYGWKEIGLKGGGNGLSVNENRLDFKSTMGLKEVALGINKQRLKRSIKGAIGRKEQQIEALSRVQGPNWRKESRLAEQELEILLEEEEIYWKQRAREDWLECGDRNTKWFHLRASRRRRTNRIEGLKDENGVWIEEEFSLVGLANSYFQKLFNSHNLDEGSILTTIEAIPSSISEDQNINLTRPFTRSEVKEALKQKVTQVLNLN 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 41181896 41195658 - Hsped.05g09380.1 Hepe05g0938 570203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0938 479 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 43 237 IPR001040 GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0006413(InterPro)|GO:0016281(PANTHER)
Hepe05g0938 479 SUPERFAMILY eIF4e-like 41 239 IPR023398 -
Hepe05g0938 479 MobiDBLite consensus disorder prediction 30 52 - -
Hepe05g0938 479 Pfam Eukaryotic initiation factor 4E 65 223 IPR001040 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro)
Hepe05g0938 479 ProSitePatterns Eukaryotic initiation factor 4E signature. 121 144 IPR019770 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro)
Hepe05g0938 479 Gene3D RNA Cap, Translation Initiation Factor Eif4e 36 236 IPR023398 -
Hepe05g0938 479 FunFam Eukaryotic translation initiation factor NCBP 36 236 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0938 Hepe-Chr5:41181896 Hepe02g2134 Hepe-Chr2:57251891 5.03e-71 dispersed
Hepe03g0309 Hepe-Chr3:4272612 Hepe05g0938 Hepe-Chr5:41181896 1.08e-29 transposed
Hepe07g1814 Hepe-Chr7:60893308 Hepe05g0938 Hepe-Chr5:41181896 4.97e-33 transposed
Hepe01g0439 Hepe-Chr1:58719359 Hepe05g0938 Hepe-Chr5:41181896 1.91e-28 wgd
Hepe01g0280 Hepe-Chr1:41540807 Hepe05g0938 Hepe-Chr5:41181896 3.65e-35 wgd
Hepe03g1081 Hepe-Chr3:60947874 Hepe05g0938 Hepe-Chr5:41181896 3.08e-32 wgd
Hepe04g0218 Hepe-Chr4:43948314 Hepe05g0938 Hepe-Chr5:41181896 2.71e-32 wgd
Hepe04g0202 Hepe-Chr4:43383166 Hepe05g0938 Hepe-Chr5:41181896 8.96e-30 wgd
Hepe05g0759 Hepe-Chr5:16707059 Hepe05g0938 Hepe-Chr5:41181896 9.85e-32 wgd
Hepe05g0938 Hepe-Chr5:41181896 Hepe06g0598 Hepe-Chr6:44650899 6.90e-38 wgd
Hepe05g0938 Hepe-Chr5:41181896 Hepe07g1158 Hepe-Chr7:25757092 1.38e-40 wgd
Hepe05g0938 Hepe-Chr5:41181896 Hepe07g1049 Hepe-Chr7:15748624 9.26e-29 wgd
Hepe05g0938 Hepe-Chr5:41181896 Hepe09g1537 Hepe-Chr9:40501339 7.33e-49 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0938 K03259 - csv:101204290 456.832