Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0997 ATGGGGGCGATTTTGCCTGCTTCAGTTTTGCAAATGCTGCTATTTTTGGCTTTCTTCTACTTGGCTGCTTCCTCTACTGATTCCCGCGATTTTGTAGTGCTTCAATCCTTGAAAGATGAATGGGAAAATACACCACCAGGCTGGGGAACATCAAATGACCCCTGTGGAGCTCCCTGGGAGGGAGTGATTTGCAACAATTCAAGAGTAGTCTCATTGAGATTATCAAGTATGGGCCTAAAAGGTAATCTTGGTGGTGACATTGGAGGCCTTACTGAACTGAGATTACTGGACCTTTCAGCCAATCGAGACCTCACTGGTACAATCTCTCCGGCGCTAGGGAATTTGGTGAAATTGGATACCCTGATCCTTTCTGCGTGTGGATTTAGTGGTAATATTCCAGAAGAATTCGGCAATCTTGCTGAGCTAAACTTCTTGTCCTTGTATTCTAACAATTTCACTGGTACCATACCGCCAACTCTGGGAAAACTCTCCAAACTCTATTGGCTAGACCTGGCAGATAATCAGTTGACTGGTGCTATCCCAGTTTCGACTTCCGAATCTCCGGGTTTGGATCTACTTTTTGAGGCTAAACATTTTCATTTCAGCAAAAACCAGTTATCAGGTACCATTTCACCTAAGCTTTTTGGCTCTACGAAGGTATTATTACACATATTGTTTGATGGAAATAACTTTTCTGGGAGTATCCCACCAACATTGGGACTTGTTAAGACCCTTGAGGTTCTTCGACTTGATCGAAATTCTTTAACAGGAAATGTCCCATCAAATCTAAATGGCCTAATAAATGTCAATGAATTGCATTTAGCCAACAATAAACTAACAGGCCCACTACCAAACTTAACTCAAATGAGTTCACTAAGTTACGTGGACCTTAGCAACAACTCATTTGATTCATCGGCAGCTCCGGAATGGTTATCAAATCTACACTCCCTCACCACTCTGATTGTTGAACATGGGTCAATACGAGGATATGTGCCGGAAGGAATCTTTAGCTTACCACATATACAACAAGTAAAACTGAAGAACAATGCATTTAGTGAGACATTAAATATGGGTGATAGCATCAGCCAACCGTTGCGGCTAGTCGATTTGCAAAATAACAATATTTCCTCAGTTACCTCCTTTTCCGGATATACTAACCGTTTGATGCTGACAGGAAATCCTGTGTGTAACAATCATGACCTCTCAAATACAAACTATTGCCGGCTTCAACAGCAACAAACAAAATCCTATTCTACCAGCCTTGTGAACTGTGAAAGTAATACATGTCCTCCTGATGAGAAGCTGAACCCTCAGAGTTGTGAATGTGCCTATCCATATGAAGGGACTTTATACTTTAGAGGACCCTTCTTCAGGGAATTGTCCAATATAACTCTGTTTCGGTTACTGGAAACGAGCCTTTTCGATAAGTTCAACCTTACGCCTTTTATTCAAAACCCTTACTTTAATGGTGATGATTATCTTCAGATGTATCTTGCACTTTTTCCTCCCAACGATAAGTATTTCAATAGGGTAGACATTCTGAAGATTGGGTTTAGTTTGCACAATCAAACTTACAAACCTCCCCACAAGTTTGGGCCATATTATTTCATTGCATCTCCTTATCCTTTTTCAGACATAATTAGGGGAACTCGAACCAACACTGGAGTGGTAATTGGAATAGCTGTTGGCTGTGCCTTTCTTGTTCTATGCCTCATTGGAGTTGGAATGTATGCAATGCGACAAAAGAGACGTGCAGAAAATGCCAAGCCAAATGCTTTCTGGATACCAAGTGGAAATGATAGTGGAGGTGCACCACAATTAAAGGGAGCCAGATGGTTCTCTTATGATGAACTTAAGAAATGCACAAATAACTTTTCCACGAGTAATGAGATAGGATCCGGAGGATTTGGCAAGGTATACAGAGGAACGCTGGTGGATGGAAAAGTAGTTGCAATCAAAAGAGCTCAACTAGGATCAATGCAGGGTGGCCTTGAGTTCAAGACAGAAATTGAGCTGCTTTCACGAGTTCATCACAAGAATCTTCTTGGCCTACTGGGATTTTGTTCCGAACACGAAGAACAGATTCTTGTTTACGAATTCATGCCTAATGGGACACTTAGAGAGAGCCTAGCTGGAAAATCTGGTATTTATCTCGATTGGAAGAGAAGACTTCGTGTCGCACTTGGGTCTGCCAGAGGACTGACTTACTTACATGAGCTTGCTAATCCTCCCATAATCCATAGAGATATTAAGTCCACCAACATTTTACTAGATGAACATTTAAATGCTAAGGTTGCAGATTTTGGCTTATCCAAGCTTGTCTCAGACTGTGGAAAGGGACATGTTTCTACTCAAGTCAAAGGCACAATGGGTTATTTGGATCCTGAATATTACATGAGCCAACAATTGACTGAGAAAAGCGACGTGTACAGCTTTGGAATAGTTATGTTGGAATTGCTGACTGCTAAGCTACCAATTGAAAAAGGAAAGTACATAGTTCGTGAGGTGCGCACGTTGATGAATAAGAGCGATGAAGAATATTATGGTTTGAAGCACATAATGGATGCAACCATAATCAATCATACAACAACTCTTATTGGATTTGGTAGGTTCTTAGAGTTGGCCTTGCAATGTGTTGAAGAAGCAGCTGCAGATCGTCCCACAATGAGTGAACTGGTTAAGGAACTTGAGGAGATATTGAAGAATGATGGAATAAATTCAACCTCAACATCAGTATCCACATCTGCCACAGACTTTGGGACTTCCAAAACTCCTCCTAGACATCCTTATAATGATGCTATACCCAAAGAGGGTGTCAACAGCCAATGA 2829 41.25 MGAILPASVLQMLLFLAFFYLAASSTDSRDFVVLQSLKDEWENTPPGWGTSNDPCGAPWEGVICNNSRVVSLRLSSMGLKGNLGGDIGGLTELRLLDLSANRDLTGTISPALGNLVKLDTLILSACGFSGNIPEEFGNLAELNFLSLYSNNFTGTIPPTLGKLSKLYWLDLADNQLTGAIPVSTSESPGLDLLFEAKHFHFSKNQLSGTISPKLFGSTKVLLHILFDGNNFSGSIPPTLGLVKTLEVLRLDRNSLTGNVPSNLNGLINVNELHLANNKLTGPLPNLTQMSSLSYVDLSNNSFDSSAAPEWLSNLHSLTTLIVEHGSIRGYVPEGIFSLPHIQQVKLKNNAFSETLNMGDSISQPLRLVDLQNNNISSVTSFSGYTNRLMLTGNPVCNNHDLSNTNYCRLQQQQTKSYSTSLVNCESNTCPPDEKLNPQSCECAYPYEGTLYFRGPFFRELSNITLFRLLETSLFDKFNLTPFIQNPYFNGDDYLQMYLALFPPNDKYFNRVDILKIGFSLHNQTYKPPHKFGPYYFIASPYPFSDIIRGTRTNTGVVIGIAVGCAFLVLCLIGVGMYAMRQKRRAENAKPNAFWIPSGNDSGGAPQLKGARWFSYDELKKCTNNFSTSNEIGSGGFGKVYRGTLVDGKVVAIKRAQLGSMQGGLEFKTEIELLSRVHHKNLLGLLGFCSEHEEQILVYEFMPNGTLRESLAGKSGIYLDWKRRLRVALGSARGLTYLHELANPPIIHRDIKSTNILLDEHLNAKVADFGLSKLVSDCGKGHVSTQVKGTMGYLDPEYYMSQQLTEKSDVYSFGIVMLELLTAKLPIEKGKYIVREVRTLMNKSDEEYYGLKHIMDATIINHTTTLIGFGRFLELALQCVEEAAADRPTMSELVKELEEILKNDGINSTSTSVSTSATDFGTSKTPPRHPYNDAIPKEGVNSQ 942
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 45839823 45847808 + Hsped.05g09970.1 Hepe05g0997 570262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0997 942 CDD STKc_IRAK 631 899 - -
Hepe05g0997 942 FunFam Leucine-rich repeat family protein 29 185 - -
Hepe05g0997 942 SUPERFAMILY L domain-like 286 398 - -
Hepe05g0997 942 ProSiteProfiles Protein kinase domain profile. 625 900 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0997 942 FunFam Predicted protein 188 410 - -
Hepe05g0997 942 Gene3D Phosphorylase Kinase; domain 1 599 700 - -
Hepe05g0997 942 ProSitePatterns Serine/Threonine protein kinases active-site signature. 745 757 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0997 942 SUPERFAMILY Protein kinase-like (PK-like) 610 913 IPR011009 -
Hepe05g0997 942 Gene3D Transferase(Phosphotransferase) domain 1 701 920 - -
Hepe05g0997 942 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Hepe05g0997 942 FunFam Leucine-rich repeat protein kinase family protein 596 700 - -
Hepe05g0997 942 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 701 913 - -
Hepe05g0997 942 SMART serkin_6 625 900 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0997 942 ProSitePatterns Protein kinases ATP-binding region signature. 631 653 IPR017441 GO:0005524(InterPro)
Hepe05g0997 942 Pfam Protein tyrosine and serine/threonine kinase 627 896 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0997 942 SUPERFAMILY L domain-like 37 302 - -
Hepe05g0997 942 Gene3D Ribonuclease Inhibitor 30 186 IPR032675 -
Hepe05g0997 942 MobiDBLite consensus disorder prediction 906 942 - -
Hepe05g0997 942 PANTHER RECEPTOR-LIKE PROTEIN 55 41 897 - -
Hepe05g0997 942 Pfam Leucine Rich Repeat 118 139 IPR001611 GO:0005515(InterPro)
Hepe05g0997 942 Pfam Leucine Rich Repeat 245 266 IPR001611 GO:0005515(InterPro)
Hepe05g0997 942 Pfam Leucine Rich Repeat 142 163 IPR001611 GO:0005515(InterPro)
Hepe05g0997 942 Gene3D Ribonuclease Inhibitor 187 285 IPR032675 -
Hepe05g0997 942 Gene3D Ribonuclease Inhibitor 286 436 IPR032675 -
Hepe05g0997 942 MobiDBLite consensus disorder prediction 906 924 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0002 Hepe-Chr5:83401 Hepe05g0997 Hepe-Chr5:45839823 0.0 dispersed
Hepe05g0997 Hepe-Chr5:45839823 Hepe08g0830 Hepe-Chr8:7511904 1.21e-76 dispersed
Hepe10g1398 Hepe-Chr10:50397851 Hepe05g0997 Hepe-Chr5:45839823 1.88e-61 dispersed
Hepe05g0997 Hepe-Chr5:45839823 Hepe05g0998 Hepe-Chr5:45849468 1.31e-70 tandem
Hepe04g0062 Hepe-Chr4:22544435 Hepe05g0997 Hepe-Chr5:45839823 2.79e-12 wgd
Hepe05g0997 Hepe-Chr5:45839823 Hepe06g0410 Hepe-Chr6:15484148 6.54e-74 wgd
Hepe05g0997 Hepe-Chr5:45839823 Hepe09g1569 Hepe-Chr9:42598454 3.41e-29 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72817 PF07714 PK_Tyr_Ser-Thr 1.50E-45 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0997 - - - 0.0