Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe05g0998 | ATGATGATCCCTTTTAGCTTTGTTTCTGCATGGAACAAGAGGCGTAGAAGAAAAAACTCATCACAAGATCATCATCAAGCTGCAAATCCTTGGATCTATAGATCAGTTGAGTTGTGGCAGCTTGAGGATCAAACCACCCTCCAAACACCCCCCCAAAGACACCATGGATCTTCTGTCTATACGCTTAGGGAAATGGAAGAGGCCACGTCTTCGTTTAGCGACACTAACTTGCTCGGCAAAGGTGGCTTCGGCCGAGTTTATCGGGGTACCTTGCGATCTCGAGAGGTTGTAGCAATAAAGAAAATGGAGATGCCAGCATTTAAGGAAGCAGAAGGAGAGCGTGAGTTCCGAGTGGAAGTTGACATTCTGAGCAGATTGGAGCATCCAAATCTTGTCTCTTTGATTGGTTATTGTGCAGATGGGAAGCATCGCTTTCTAGTCTATGAATATATGCTTAAAGGGAACTTGCAAGATCATTTAAATGGAATTGGAGAAGCAAATATGGATTGGGGAGGGAGGCTGAAAGTGGCACTTGGAGCAGCAAAGGGATTGGCCTATCTCCATTCAACTTCAATTGTCCATAGGGATTTCAAATCCACTAACATTCTTCTTGATTCCAACTTCGATGCAAAGATATCGGACTTTGGGCTCGCGAAGTTTATGCCAGAAGGACAGGAATCACATGTGACTGCTAGAGTCCTCGGCACATTTGGATACTTTGATCCCGAGTATACTTCGACAGGGAAGTTGAGTGTGCAAAGTGACGTATATGCATTTGGAGTGGTTCTTCTTGAGCTCCTAACAGGCCGCCGAGCAGTGGACTTGAACCAAGGCCCAAATGATCAAAACCTTGTCGTACAGGTAAGGCATATATTGAATGATCGAAAAAAGTTACGTAAGGTGATAGATCCAGAAATGAGTCGAAGTTCATATACAATGGAGTCCATAGTCATATTTGCAAACTTGGCTTCACGTTGCGTCCGGACAGAGAGCAGCGAAAGGCCAACAATGACAGAATGTGTAAGAGAGCTGCAAATGATTATCTACACAAACTTACAAACTTGCAAGACCTACAGATATTGA | 1083 | 44.04 | MMIPFSFVSAWNKRRRRKNSSQDHHQAANPWIYRSVELWQLEDQTTLQTPPQRHHGSSVYTLREMEEATSSFSDTNLLGKGGFGRVYRGTLRSREVVAIKKMEMPAFKEAEGEREFRVEVDILSRLEHPNLVSLIGYCADGKHRFLVYEYMLKGNLQDHLNGIGEANMDWGGRLKVALGAAKGLAYLHSTSIVHRDFKSTNILLDSNFDAKISDFGLAKFMPEGQESHVTARVLGTFGYFDPEYTSTGKLSVQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVVQVRHILNDRKKLRKVIDPEMSRSSYTMESIVIFANLASRCVRTESSERPTMTECVRELQMIIYTNLQTCKTYRY | 360 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 45849468 | 45857127 | - | Hsped.05g09980.1 | Hepe05g0998 | 570263 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe05g0998 | 360 | CDD | STKc_IRAK | 78 | 345 | - | - | |
Hepe05g0998 | 360 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 192 | 204 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe05g0998 | 360 | ProSiteProfiles | Protein kinase domain profile. | 72 | 348 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe05g0998 | 360 | FunFam | receptor-like serine/threonine-protein kinase NCRK | 151 | 356 | - | - | |
Hepe05g0998 | 360 | SUPERFAMILY | Protein kinase-like (PK-like) | 50 | 350 | IPR011009 | - | |
Hepe05g0998 | 360 | FunFam | serine/threonine-protein kinase PBS1-like | 39 | 150 | - | - | |
Hepe05g0998 | 360 | PRINTS | Tyrosine kinase catalytic domain signature | 254 | 276 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe05g0998 | 360 | PRINTS | Tyrosine kinase catalytic domain signature | 148 | 161 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe05g0998 | 360 | PRINTS | Tyrosine kinase catalytic domain signature | 186 | 204 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe05g0998 | 360 | Gene3D | Phosphorylase Kinase; domain 1 | 35 | 150 | - | - | |
Hepe05g0998 | 360 | ProSitePatterns | Protein kinases ATP-binding region signature. | 78 | 101 | IPR017441 | GO:0005524(InterPro) | |
Hepe05g0998 | 360 | PANTHER | OS01G0750732 PROTEIN | 10 | 349 | IPR050885 | - | |
Hepe05g0998 | 360 | Pfam | Protein kinase domain | 74 | 342 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe05g0998 | 360 | Gene3D | Transferase(Phosphotransferase) domain 1 | 151 | 357 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe05g0998 | Hepe-Chr5:45849468 | Hepe07g1185 | Hepe-Chr7:28179256 | 3.41e-90 | dispersed | |
Hepe08g1020 | Hepe-Chr8:9783084 | Hepe05g0998 | Hepe-Chr5:45849468 | 2.48e-39 | dispersed | |
Hepe05g0997 | Hepe-Chr5:45839823 | Hepe05g0998 | Hepe-Chr5:45849468 | 1.31e-70 | tandem | |
Hepe05g0772 | Hepe-Chr5:17810173 | Hepe05g0998 | Hepe-Chr5:45849468 | 8.09e-19 | wgd | |
Hepe05g0998 | Hepe-Chr5:45849468 | Hepe06g0167 | Hepe-Chr6:6067003 | 7.29e-61 | wgd | |
Hepe05g0998 | Hepe-Chr5:45849468 | Hepe07g1396 | Hepe-Chr7:46037783 | 2.03e-66 | wgd | |
Hepe05g0998 | Hepe-Chr5:45849468 | Hepe08g1507 | Hepe-Chr8:18875861 | 5.41e-78 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72818 | PF00069 | Pkinase | 3.10E-51 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe05g0998 | - | - | - | 0.0 |