Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g0998 ATGATGATCCCTTTTAGCTTTGTTTCTGCATGGAACAAGAGGCGTAGAAGAAAAAACTCATCACAAGATCATCATCAAGCTGCAAATCCTTGGATCTATAGATCAGTTGAGTTGTGGCAGCTTGAGGATCAAACCACCCTCCAAACACCCCCCCAAAGACACCATGGATCTTCTGTCTATACGCTTAGGGAAATGGAAGAGGCCACGTCTTCGTTTAGCGACACTAACTTGCTCGGCAAAGGTGGCTTCGGCCGAGTTTATCGGGGTACCTTGCGATCTCGAGAGGTTGTAGCAATAAAGAAAATGGAGATGCCAGCATTTAAGGAAGCAGAAGGAGAGCGTGAGTTCCGAGTGGAAGTTGACATTCTGAGCAGATTGGAGCATCCAAATCTTGTCTCTTTGATTGGTTATTGTGCAGATGGGAAGCATCGCTTTCTAGTCTATGAATATATGCTTAAAGGGAACTTGCAAGATCATTTAAATGGAATTGGAGAAGCAAATATGGATTGGGGAGGGAGGCTGAAAGTGGCACTTGGAGCAGCAAAGGGATTGGCCTATCTCCATTCAACTTCAATTGTCCATAGGGATTTCAAATCCACTAACATTCTTCTTGATTCCAACTTCGATGCAAAGATATCGGACTTTGGGCTCGCGAAGTTTATGCCAGAAGGACAGGAATCACATGTGACTGCTAGAGTCCTCGGCACATTTGGATACTTTGATCCCGAGTATACTTCGACAGGGAAGTTGAGTGTGCAAAGTGACGTATATGCATTTGGAGTGGTTCTTCTTGAGCTCCTAACAGGCCGCCGAGCAGTGGACTTGAACCAAGGCCCAAATGATCAAAACCTTGTCGTACAGGTAAGGCATATATTGAATGATCGAAAAAAGTTACGTAAGGTGATAGATCCAGAAATGAGTCGAAGTTCATATACAATGGAGTCCATAGTCATATTTGCAAACTTGGCTTCACGTTGCGTCCGGACAGAGAGCAGCGAAAGGCCAACAATGACAGAATGTGTAAGAGAGCTGCAAATGATTATCTACACAAACTTACAAACTTGCAAGACCTACAGATATTGA 1083 44.04 MMIPFSFVSAWNKRRRRKNSSQDHHQAANPWIYRSVELWQLEDQTTLQTPPQRHHGSSVYTLREMEEATSSFSDTNLLGKGGFGRVYRGTLRSREVVAIKKMEMPAFKEAEGEREFRVEVDILSRLEHPNLVSLIGYCADGKHRFLVYEYMLKGNLQDHLNGIGEANMDWGGRLKVALGAAKGLAYLHSTSIVHRDFKSTNILLDSNFDAKISDFGLAKFMPEGQESHVTARVLGTFGYFDPEYTSTGKLSVQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVVQVRHILNDRKKLRKVIDPEMSRSSYTMESIVIFANLASRCVRTESSERPTMTECVRELQMIIYTNLQTCKTYRY 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 45849468 45857127 - Hsped.05g09980.1 Hepe05g0998 570263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g0998 360 CDD STKc_IRAK 78 345 - -
Hepe05g0998 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0998 360 ProSiteProfiles Protein kinase domain profile. 72 348 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0998 360 FunFam receptor-like serine/threonine-protein kinase NCRK 151 356 - -
Hepe05g0998 360 SUPERFAMILY Protein kinase-like (PK-like) 50 350 IPR011009 -
Hepe05g0998 360 FunFam serine/threonine-protein kinase PBS1-like 39 150 - -
Hepe05g0998 360 PRINTS Tyrosine kinase catalytic domain signature 254 276 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0998 360 PRINTS Tyrosine kinase catalytic domain signature 148 161 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0998 360 PRINTS Tyrosine kinase catalytic domain signature 186 204 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g0998 360 Gene3D Phosphorylase Kinase; domain 1 35 150 - -
Hepe05g0998 360 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524(InterPro)
Hepe05g0998 360 PANTHER OS01G0750732 PROTEIN 10 349 IPR050885 -
Hepe05g0998 360 Pfam Protein kinase domain 74 342 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g0998 360 Gene3D Transferase(Phosphotransferase) domain 1 151 357 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0998 Hepe-Chr5:45849468 Hepe07g1185 Hepe-Chr7:28179256 3.41e-90 dispersed
Hepe08g1020 Hepe-Chr8:9783084 Hepe05g0998 Hepe-Chr5:45849468 2.48e-39 dispersed
Hepe05g0997 Hepe-Chr5:45839823 Hepe05g0998 Hepe-Chr5:45849468 1.31e-70 tandem
Hepe05g0772 Hepe-Chr5:17810173 Hepe05g0998 Hepe-Chr5:45849468 8.09e-19 wgd
Hepe05g0998 Hepe-Chr5:45849468 Hepe06g0167 Hepe-Chr6:6067003 7.29e-61 wgd
Hepe05g0998 Hepe-Chr5:45849468 Hepe07g1396 Hepe-Chr7:46037783 2.03e-66 wgd
Hepe05g0998 Hepe-Chr5:45849468 Hepe08g1507 Hepe-Chr8:18875861 5.41e-78 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72818 PF00069 Pkinase 3.10E-51 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g0998 - - - 0.0