Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1065 ATGGCACAACAACACCTTGCTGCTCATCAAAATGCTTCAGTCCACACCTTCTGCACCAGCCATCCCGATCCCCTCAACTGGGGCGTGGCGGCTGACTCAATGAAGGTAAGCCATTTAGATGAGGTCAAGCGCATGGTGGAAGAGTATCGAAGCCCAATCGTGAAGCTTGGAGGAGAGACCCTCACCATTTCCCAAGTGGCTGCCATTGCCACTCGTGATAACCATGTCATCGTTGAATTGGCCGAGTCTGCAAGGGCTGCTGTCAAAGCTAGCAGCGATTGGGTGATGGAAAGCATGAGTAAAGGCACGGATAGTTATGGTGTCACTACTGGCTTTGGTGCTACTTCCCATAGAAGAACCAACCAAGGTGGTGCTCTTCAAAAGGAGTTGATCCGCTTCTTGAATTCTGGCATCTTTGGAAATGGAACTGAATCAACCCACACTTTGCCTCACTCTGCCACCCGAGCAGCCATGTTGGTGAGAATCAACACTCTCCTTCAAGGCTATTCAGGTATTAGATTCGAGATTTTGGAAGCTATCGTTAATCTCTTGAACCACAACGTCACTCCTTGTTTGCCACTACGAGGAACAATTACAGCTTCTGGGGACTTGGTTCCCTTGTCTTATATTGCTGGGCTACTCACGGGTCGTCATAATTCGAAAGCCATTGGACCCAATGGAGAAACCATTGATGCAAAGACCGCTTTTGAACAAGCTGGTATTGATTCTGGGTTCTTTGAGTTGCAGCCTAAAGAAGGTCTTGCTCTTGTTAATGGAACTGCGGTCGGTTCTGGGTTGGCTTCCATTGTTCTCTTCGACGCAAATATTTTGGCCGTTTTGTCAGAAATTCTTTCGGCCATTTTTGCTGAGGTGATGCAAGGAAAGCCTGAATTCACCGACCATTTGACCCATAAGTTGAAGCACCATCCTGGTCAGATTGAAGCAGCTGCAATTATGGAGCACATTTTGGATGGAAGCTCCTACATGAAAACGGCCAAGAAATTGCATGAAATGGATCCTCTCCAAAAGCCAAAACAAGATCGTTACGCTCTTAGAACTTCTCCTCAATGGCTAGGTCCTTTGATTGAAGTTATTCGGTTCTCCACAAAGTCAATCGAGCGGGAGATTAATTCCGTCAACGACAACCCTTTGATCGACGTTTCAAGAAACAAGGCATTGCATGGAGGCAACTTCCAAGGAACACCAATCGGAGTTTCCATGGACAACACTCGTTTGGCCATTGCGGCTATTGGGAAGCTCATGTTTGCCCAATTTTCAGAACTTGTCAATGATTTCTACAATAACGGTTTGCCTTCTAATCTTTCTGCAAGTAGAAACCCAAGCTTGGATTATGGTTTCAAAGGTGCTGAGATTGCAATGGCTTCGTATTGTTCTGAACTCCAATATCTTGCAAATCCAGTGACAAGTCATGTTCAGAGCGCCGAGCAACACAACCAAGATGTTAACTCTCTTGGTTTAATTTCTTCAAGGAAAACAGCTGAAGCCATCGATATTCTAAAACTCATGTCTTCCACCTTTTTAGTTGCTCTTTGCCAAGCAATTGACTTGAGGCATTTGGAGGAAAACTTGAAGAGCATCGTAAAAAACACAGTCAGCAAAGTAGCAAAAAAAGTGTTGACCACATCTTGTAATGGCGCACTTCACCCATCAAGATTTTGCGAGAAAGATCTACTTAAAGTTGTCGAGCGAGAATACATATTTGCATACATTGATGATCCATGCAGTGCTACTTACCCATTGATGCAAAAGTTGAGGCAAGTTCTTGTTGAGCACGCACTTGAAAATGGTGATAATGAAGTGAACTCGAATACTTCAATCTTCCAAAAGATTGGTGCTTTTGAAGAAGAATTAAAGACAGTTTTACCAAAGGAGGTTGAAACAGTAAGGTCGGCGTATGAGAACGGAAATTCTAAAATTGGAAATCAAATTAAGGATTGCAGATCTTATCCATTATACAGATTTGTGAGGGAGGAGTTGGGAACAAGATTGCTAACAGGAGAAAAGGTGATTTCTCCAGGAGAAGAGTGCGAGAAGGGCGGTGGCGCGCCGCTGCCGCCGCCCGATCTCATTCATCTGATTTCGATCATCCGGACATTTTTTGTCTGCTCCAAGAAACGCTCTCTGCCATCGTTCCTCTCTCTTCCCTCTCCTCACCGCCCACAGTTCATCTTCTCCGATCAGCCACCACCACTTGCCACCGTCGTTCAAAACAGCGACCTTCCGCCACACGTCGTCGCTCCGTTCAGCCACCTTCGCCTGCCATCGTCTCTCCCTTCACCAGTCGCCGCCCTCTCCGCCTCCCGCCGAACAACACTCCGCCCAGATTTGTTTGAGCCGGAATATCAGCTAACCTCCACTCATATCCTCTCACTGCCGACACCCGTTCGCCCCCGATCTGTTTTCGCCACTTCGTGCTCGTTGAAACCTACGTTTCGATCTGCTCCACGTTGTTACCTCCGCCTTCGCCCGCCAAGATCTTACGCCCTCATGTCGCCTTCAACCTCCCTATATATGTTTGTGTCGCTTCCACCTTCGTAG 2559 46.7 MAQQHLAAHQNASVHTFCTSHPDPLNWGVAADSMKVSHLDEVKRMVEEYRSPIVKLGGETLTISQVAAIATRDNHVIVELAESARAAVKASSDWVMESMSKGTDSYGVTTGFGATSHRRTNQGGALQKELIRFLNSGIFGNGTESTHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAIVNLLNHNVTPCLPLRGTITASGDLVPLSYIAGLLTGRHNSKAIGPNGETIDAKTAFEQAGIDSGFFELQPKEGLALVNGTAVGSGLASIVLFDANILAVLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKTAKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQAIDLRHLEENLKSIVKNTVSKVAKKVLTTSCNGALHPSRFCEKDLLKVVEREYIFAYIDDPCSATYPLMQKLRQVLVEHALENGDNEVNSNTSIFQKIGAFEEELKTVLPKEVETVRSAYENGNSKIGNQIKDCRSYPLYRFVREELGTRLLTGEKVISPGEECEKGGGAPLPPPDLIHLISIIRTFFVCSKKRSLPSFLSLPSPHRPQFIFSDQPPPLATVVQNSDLPPHVVAPFSHLRLPSSLPSPVAALSASRRTTLRPDLFEPEYQLTSTHILSLPTPVRPRSVFATSCSLKPTFRSAPRCYLRLRPPRSYALMSPSTSLYMFVSLPPS 852
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 51629891 51634053 - Hsped.05g10650.1 Hepe05g1065 570330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1065 852 PANTHER HISTIDINE AMMONIA-LYASE 15 685 IPR001106 GO:0016841(PANTHER)|GO:0045548(PANTHER)
Hepe05g1065 852 FunFam Phenylalanine ammonia-lyase 527 648 - -
Hepe05g1065 852 Pfam Aromatic amino acid lyase 61 538 IPR001106 -
Hepe05g1065 852 Gene3D - 527 648 IPR023144 -
Hepe05g1065 852 FunFam Phenylalanine ammonia-lyase 261 573 - -
Hepe05g1065 852 NCBIfam phenylalanine ammonia-lyase 23 685 IPR005922 GO:0005737(InterPro)|GO:0006559(InterPro)|GO:0016841(InterPro)
Hepe05g1065 852 FunFam Phenylalanine ammonia-lyase 14 260 - -
Hepe05g1065 852 SUPERFAMILY L-aspartase-like 23 685 IPR008948 GO:0003824(InterPro)
Hepe05g1065 852 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 196 212 IPR022313 GO:0016841(InterPro)
Hepe05g1065 852 CDD PAL-HAL 59 524 IPR001106 -
Hepe05g1065 852 Gene3D Fumarase/aspartase (Central domain) 261 685 - -
Hepe05g1065 852 Gene3D - 14 260 IPR024083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1033 Hepe-Chr1:75051102 Hepe05g1065 Hepe-Chr5:51629891 0.0 dispersed
Hepe05g1065 Hepe-Chr5:51629891 Hepe06g0344 Hepe-Chr6:12824240 0.0 dispersed
Hepe05g1065 Hepe-Chr5:51629891 Hepe04g0943 Hepe-Chr4:63784125 0.0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1065 K10775 - csv:101204574 1263.44