Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1167 ATGGATAAAATCCCACCCCCAGAAAAGTCTGAAAGTTTTTCAAGAAATTTCAATAGAAGGATTGCAAATTTGGGCTCACCTCGCCGGACTACCGATGCCGTCCTTGATGCTAAATCAGAAGCTGAAAAGCTTGCCGATCGAGAGGATGATGCCCTCATTGAAGACCCTCTTTCCGAATCTGAGACTGCCTTGATTTTCGAAGAGGTTGATGCCTTCCTCACCACCTTCTCCAATGCTGGAAACGACCTTGAAATTCCGCCCTCCGTTCTTTCATTGTCCAAAATGGTCGACTCCATGACCTCCAGGTACAATTCTAGCAAAACTCCGGAGAAGCTCGGCAGAGATCCCGACCTAGATTCTTTGTTTTTCGAAGCTCTCAATCGCATTTCAACGATTGCGATTAAATTAACCGAATTCCCTCCAAGCAATGCCTCCATGATTCAATCCCTCAATCGGGCCACTACGTCTGTGCAGCGAGCCATGTCATTATTGGACGGAGAATTCAACGACCTTCTCAAAGAATGTAAACATCGAGAGATCGATTCCAAATCTGACCGGAAGCAATCGTCGTTCAAAGCAATCAACGAATTAACAGATCAAAATCAATGCACCCTTCATGAATCATCAGAGTCCGATTCTGCCAAGGAAGAGGAATTCCCCTCTTTGTCACTAGATACCATATCGAACATGAAAAGAATCGCCGGAACGATGATCTCCGCCGGCTACGAGAAGGAATGTTGTATGAGTTACAGCATCCTCCGGCAGAGCTCATTCAAAGGAATATTGAACAAGCTCGGGTACGAAAGTGTTAGCATCGACGAGATACAGAGAATGCAATGGGAGACTCTTCAAACGGAAATCGACAAATGGATCCCCGTCGTCAAGAAATGCACAAAATCTCTCTTCCCTGGCGAGTGGAAGCTCTGTGATTCTGTTTTCAACGATTATCCCTTCATTTCACATACGCTCTTCGGCAATTTAACAAGTGCAGTAGTCATCAAGCTTCTCAACTTCGCAAACGCCGTTGTTTTGACGAGTCGATCGGCGGAGAAGATGTTTAAATTACTCGACATGTACGAAACCATCCGTGATTTAATTCCAGCCATCAATGGCTTCCCTGATAAAGGAAAAACAGAGCTAATTTCAGAAGCAGAAGGGGTAAAAAGAGGTATAGGCGAAGCAATAGTCGGCATTTTCTACGACCTAGAGAGCTCAATCAAAAGCGACAACGCCAAAATTCCAGTTCCAGGAGGAGCAGTTCATCCATTGACGCGCTACATAATGAATTACCTAAAATACGCTTGCGAGTACAAAGAAACCCTAGAACAGGTATTCCAATTTCTCGATCCTAAAATCGACGAAGACAGACCGGACGAAAACGACGACGCGTCGCCGAGAAAGTCTCAGCTCGCGATTCGGCTAGCGATGGTGATGGATCTACTCGACGCGAATCTCTCGATGAGATCGAAATTGTACCGCGACTCATCTCTTCGGTACATATTCCTGATGAACAACGGAAGGTATATAGTACAGAAAATCAAAGGCTCATCTGGAATTACCGAATTGATGGGAGACCGATGGTGCCGGAAGAGATCGACGAATCTGCGACAGTACCACAAAAATTACCAGAGAGAAACATGGAGTAAGGTGCTGCAGTGCTTGAGCCACGAAGGATTGCTGGTGAATGGGAAGGTATTGAAGCCGATTTTGAAGGAGAGATTCAAATGCTTCAACGCGATGTTCGACGAAATACACAAAACGCAGAGCAGTTGGGTTGTGAGCGACGAGCAGCTTCAATCGGAGCTCCGGATTTCGGTATCGGCGGTGATGATTCCGGCGTACCGTTCGTTCGTGGGGAGATTCAAACAGCATTTCGATCAAGGAAGACAATCGGAGAAGTACATAAAGTATCATCCTGAAGATATTGAAGCTTTGATCGATGACCTGTTTGATGGAAATACTGCATCTATGGGGAGAAGGAGAATGTAA 1989 45.55 MDKIPPPEKSESFSRNFNRRIANLGSPRRTTDAVLDAKSEAEKLADREDDALIEDPLSESETALIFEEVDAFLTTFSNAGNDLEIPPSVLSLSKMVDSMTSRYNSSKTPEKLGRDPDLDSLFFEALNRISTIAIKLTEFPPSNASMIQSLNRATTSVQRAMSLLDGEFNDLLKECKHREIDSKSDRKQSSFKAINELTDQNQCTLHESSESDSAKEEEFPSLSLDTISNMKRIAGTMISAGYEKECCMSYSILRQSSFKGILNKLGYESVSIDEIQRMQWETLQTEIDKWIPVVKKCTKSLFPGEWKLCDSVFNDYPFISHTLFGNLTSAVVIKLLNFANAVVLTSRSAEKMFKLLDMYETIRDLIPAINGFPDKGKTELISEAEGVKRGIGEAIVGIFYDLESSIKSDNAKIPVPGGAVHPLTRYIMNYLKYACEYKETLEQVFQFLDPKIDEDRPDENDDASPRKSQLAIRLAMVMDLLDANLSMRSKLYRDSSLRYIFLMNNGRYIVQKIKGSSGITELMGDRWCRKRSTNLRQYHKNYQRETWSKVLQCLSHEGLLVNGKVLKPILKERFKCFNAMFDEIHKTQSSWVVSDEQLQSELRISVSAVMIPAYRSFVGRFKQHFDQGRQSEKYIKYHPEDIEALIDDLFDGNTASMGRRRM 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 57304545 57306533 - Hsped.05g11670.1 Hepe05g1167 570432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1167 662 Pfam Exo70 exocyst complex subunit C-terminal 289 648 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Hepe05g1167 662 Gene3D Exocyst complex component Exo70 106 660 - -
Hepe05g1167 662 SUPERFAMILY Cullin repeat-like 122 651 IPR016159 -
Hepe05g1167 662 MobiDBLite consensus disorder prediction 20 42 - -
Hepe05g1167 662 FunFam Exocyst subunit Exo70 family protein 105 658 - -
Hepe05g1167 662 PANTHER EXOCYST COMPLEX PROTEIN EXO70 113 653 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2406 Hepe-Chr2:69701814 Hepe05g1167 Hepe-Chr5:57304545 2.74e-186 dispersed
Hepe05g0540 Hepe-Chr5:7463911 Hepe05g1167 Hepe-Chr5:57304545 5.09e-90 dispersed
Hepe05g1167 Hepe-Chr5:57304545 Hepe10g1367 Hepe-Chr10:49930044 1.36e-116 dispersed
Hepe05g1167 Hepe-Chr5:57304545 Hepe09g0051 Hepe-Chr9:422913 2.73e-106 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1167 K07195 - csv:101220402 1088.17