Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe05g1179 | ATGGCTTCTCACTCCCCCAACCTCGAGTGTCGGATGTACGAATCCAGGTACCCCGAGGTCGACATGGCCGTCATGATCCAGGTCAAGAACATCGCAGACATGGGCGCCTATGTCTCTCTTCTCGAGTACAACAACATTGAAGGCATGATACTATTTTCCGAGCTCTCTCGCCGTCGTATTCGGAGTGTCAGCAGCTTAATTAAGGTCGGCCGAATCGAGCCCGTCATGGTCCTCAGGGTCGATAAGGAGAAGGGCTATATTGATTTGAGTAAGAGGAGGGTTTCTGAGGAGGATATTCAGACTTGTGAGGAGAGGTATAACAAGAGCAAGCTTGTTCACTCTATTATGCGCCATGTTGCTGAGACTATGAACATTGATTTGGAGGACTTGTATATCCATGTTGGGTGGCCTTTGTACCGGAAATATGGTCACGCTTTTGAGGTAACCAAGGTAGTTCCCGCAATGTCTGAGGATGTAAAAGATTCTTTAATAAAGAATATTAAAAGAAGAATGACTCCCCAGCCAATGAAGGTTCGGGCTGATATTGAGATGAAGTGTTCCCAGTTTGACGGTGTTCTTCACATCAAGGAAGCAATGCGGAAAGCTGAAGCTGCTGGAAATGATGATTGTCCTGTTAAAATTAAGTTGGTTGCTCCTCCACTCTATGTCCTTACTACCCAGACACTTGACAAGGAGCAAGGAATCAGTGTTCTTGAAAAAGCAATCACTGCTTGCACCGAAGCAATTGAGCATCACAAAGGAAAGCTTGTAGTGAAGGAGGCACCTAGGGCGGTGAGTGAAAGAGACGACAAATTACTTGCCGAGCACATGGCGAAGCTACGACAAGACAATGAAGAAATTAGCGGAGATGAGGGTAGCGAGGAAGAGGAGGACACGGGAATGGGAGACGTCGATGTCGAGAATCTATAG | 930 | 46.77 | MASHSPNLECRMYESRYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVSSLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQTCEERYNKSKLVHSIMRHVAETMNIDLEDLYIHVGWPLYRKYGHAFEVTKVVPAMSEDVKDSLIKNIKRRMTPQPMKVRADIEMKCSQFDGVLHIKEAMRKAEAAGNDDCPVKIKLVAPPLYVLTTQTLDKEQGISVLEKAITACTEAIEHHKGKLVVKEAPRAVSERDDKLLAEHMAKLRQDNEEISGDEGSEEEEDTGMGDVDVENL | 309 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 57487582 | 57491748 | - | Hsped.05g11790.1 | Hepe05g1179 | 570444 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe05g1179 | 309 | ProSiteProfiles | S1 domain profile. | 21 | 92 | IPR003029 | GO:0003676(InterPro) | |
Hepe05g1179 | 309 | SMART | S1_6 | 19 | 92 | IPR003029 | GO:0003676(InterPro) | |
Hepe05g1179 | 309 | Pfam | S1 RNA binding domain | 18 | 92 | IPR003029 | GO:0003676(InterPro) | |
Hepe05g1179 | 309 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 | 6 | 304 | IPR011488 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0005850(PANTHER)|GO:0006413(PANTHER)|GO:0033290(PANTHER)|GO:0043022(PANTHER) | |
Hepe05g1179 | 309 | FunFam | Eukaryotic translation initiation factor 2 subunit alpha | 7 | 94 | - | - | |
Hepe05g1179 | 309 | MobiDBLite | consensus disorder prediction | 279 | 309 | - | - | |
Hepe05g1179 | 309 | MobiDBLite | consensus disorder prediction | 288 | 309 | - | - | |
Hepe05g1179 | 309 | Gene3D | EIF_2_alpha | 176 | 298 | IPR024055 | - | |
Hepe05g1179 | 309 | Gene3D | - | 6 | 94 | IPR012340 | - | |
Hepe05g1179 | 309 | Pfam | Eukaryotic translation initiation factor 2 alpha subunit | 130 | 231 | IPR011488 | GO:0003723(InterPro)|GO:0003743(InterPro) | |
Hepe05g1179 | 309 | Gene3D | Translation initiation factor 2; subunit 1; domain 2 | 95 | 170 | IPR024054 | - | |
Hepe05g1179 | 309 | SUPERFAMILY | eIF2alpha middle domain-like | 94 | 170 | IPR024054 | - | |
Hepe05g1179 | 309 | SUPERFAMILY | eIF-2-alpha, C-terminal domain | 174 | 290 | IPR024055 | - | |
Hepe05g1179 | 309 | SUPERFAMILY | Nucleic acid-binding proteins | 13 | 92 | IPR012340 | - | |
Hepe05g1179 | 309 | CDD | S1_IF2_alpha | 18 | 93 | IPR044126 | GO:0003723(InterPro) | |
Hepe05g1179 | 309 | FunFam | Eukaryotic translation initiation factor 2 subunit alpha | 95 | 148 | - | - | |
Hepe05g1179 | 309 | FunFam | Eukaryotic translation initiation factor 2 subunit 1 | 176 | 298 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g0681 | Hepe-Chr1:69107113 | Hepe05g1179 | Hepe-Chr5:57487582 | 6.09e-211 | dispersed | |
Hepe01g0690 | Hepe-Chr1:69263991 | Hepe05g1179 | Hepe-Chr5:57487582 | 2.03e-206 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe05g1179 | K03237 | - | csv:101209681 | 545.043 |