Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe05g1187 | ATGATGGAAAATTTCCCAAATTTTCTCTCAACTTCATCATCTTCAACCTCCCTCTCTCTGCAACAAATGCTTATTTCTCGAGCTTCCGAGCTTGCCGGAAGCCATGGAGGAGGCAGTTTTGGCCGGCAGCCGCCTGTCTCAGGTGGGTTTCCATTGTTTCACAGCGTTTCAGCGGACAACATGTCGTTCGATGCAACGAGTAGTATGAAGGACGACATCGTTTCGCTTAGTAAAAGCTTCCATGTTGATGGGACAGAAGGGAGTGGAGTGGATGGATTGGAGAAGAAGAAGGCCACCGGGGCCGGGGCCGGGGCCGGGGCGGGGGCGGGAGCGACGGCGGTGGCAATGACGACAGGACGGGGAGATTATGATAAGAAAAAGAAGACGAAAAGCCGGAGATTTGCTTTTCAAACAAGGAGTCAAGTTGATATTCTTGATGATGGTTATAGATGGAGAAAATATGGACAGAAGGCTGTGAAGAACAACAAATTCCCAAGAAGCTACTATAGATGTACACACCAAGGTTGCAAAGTGAAGAAGCAAGTGCAAAGACTAACTAGAGATGAAGGTGTGGTAGTGACAACTTATGAAGGAATTCACTCTCATGCCATTGAGAAATCCACTGACAACTTTGAGCATATTTTGAGTCAGATGCAAATTTACACTTCTTATTAA | 675 | 46.52 | MMENFPNFLSTSSSSTSLSLQQMLISRASELAGSHGGGSFGRQPPVSGGFPLFHSVSADNMSFDATSSMKDDIVSLSKSFHVDGTEGSGVDGLEKKKATGAGAGAGAGAGATAVAMTTGRGDYDKKKKTKSRRFAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEGVVVTTYEGIHSHAIEKSTDNFEHILSQMQIYTSY | 224 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 57725446 | 57728711 | + | Hsped.05g11870.1 | Hepe05g1187 | 570452 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe05g1187 | 224 | Gene3D | WRKY domain | 129 | 204 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe05g1187 | 224 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 113 | 207 | IPR044810 | GO:0003700(InterPro) | |
Hepe05g1187 | 224 | Pfam | WRKY DNA -binding domain | 146 | 202 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe05g1187 | 224 | ProSiteProfiles | WRKY domain profile. | 140 | 205 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe05g1187 | 224 | SMART | WRKY_cls | 145 | 204 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe05g1187 | 224 | FunFam | WRKY transcription factor 57 | 131 | 205 | - | - | |
Hepe05g1187 | 224 | SUPERFAMILY | WRKY DNA-binding domain | 137 | 203 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe05g1187 | Hepe-Chr5:57725446 | Hepe07g0768 | Hepe-Chr7:9285090 | 1.96e-34 | dispersed | |
Hepe02g3408 | Hepe-Chr2:83519531 | Hepe05g1187 | Hepe-Chr5:57725446 | 2.43e-53 | transposed | |
Hepe05g1979 | Hepe-Chr5:70260427 | Hepe05g1187 | Hepe-Chr5:57725446 | 3.97e-35 | transposed | |
Hepe10g0789 | Hepe-Chr10:15256032 | Hepe05g1187 | Hepe-Chr5:57725446 | 1.56e-24 | wgd | |
Hepe10g0780 | Hepe-Chr10:14879773 | Hepe05g1187 | Hepe-Chr5:57725446 | 1.93e-27 | wgd | |
Hepe02g1696 | Hepe-Chr2:23064225 | Hepe05g1187 | Hepe-Chr5:57725446 | 2.15e-54 | wgd | |
Hepe05g1187 | Hepe-Chr5:57725446 | HepeContig66g0148 | Hepe-ChrContig66:11912492 | 1.00e-11 | wgd | |
Hepe05g1187 | Hepe-Chr5:57725446 | HepeContig66g0148 | Hepe-ChrContig66:11912492 | 1.00e-11 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55625 | PF03106 | WRKY | 2.40E-25 | CL0274 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe05g1187 | - | - | - | 0.0 |