Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1236 ATGTCTTCGCAAGACGCCTCCCTCCCCAAATGGGCTTCCATGCCTTGTGTAATGGGAATCGACGAAGCTGGTCGAGGCCCCGTTCTAGGCCCAATGGTGTATGGATGCTTGTACTGCGCTAGTTCCTATTTGAAAGAACTTTCCTCTTTGAGTTTTGCAGATTCAAAAACTTTGAAAGAAGAGAAGAGGGAGGAATTGTTTCAAAATTTGAAGGCTAACGAATCTATTGGATGGGCTGTTGATGTCATAGATCCTCGGGAGCTTTCATCCAAAATGCTCAATAAAGTTAAGATAAACTTGAATGAAATTTCACATGACTCTGCAATGGGTCTTGTCACCAAGGTTCTAGGCATGGGAGTTCTTTTAACTGAGGTTTATGTGGATACTGTTGGAGATCCTGAAAAGTACAGAATAAAATTATCTGAAAAATTTCCCAATGTAAAATTTGTCGTTGCAAAGAAGGCTGATAGTTTATATCCTGTTGTCAGTGGGGCAAGTATAGTCGCAAAGGTAATGCTAAAAACTTTCTTCCTAGATTTGGCATTCCAACTGTTTACCACACTTAAGTTCATCAATTTGACTTGTAGGTCACAAGAGATCGTGCGTTGCGGGAATGGGCGTTGGAGGAAACAGCTGAAAACATGCATAGAAACTTTGGTTCTGGATACCCTGGAGATCCAACAACGAAATCTTGGTTAG 699 41.34 MSSQDASLPKWASMPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLSFADSKTLKEEKREELFQNLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVMLKTFFLDLAFQLFTTLKFINLTCRSQEIVRCGNGRWRKQLKTCIETLVLDTLEIQQRNLG 232
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 59279431 59283609 + Hsped.05g12360.1 Hepe05g1236 570501
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1236 232 Pfam Ribonuclease HII 18 173 IPR024567 GO:0004523(InterPro)
Hepe05g1236 232 CDD RNase_HII_eukaryota_like 18 171 - -
Hepe05g1236 232 Gene3D - 2 181 IPR036397 GO:0003676(InterPro)
Hepe05g1236 232 SUPERFAMILY Ribonuclease H-like 16 183 IPR012337 -
Hepe05g1236 232 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 15 232 IPR024567 GO:0004523(InterPro)
Hepe05g1236 232 NCBIfam ribonuclease HII 17 172 IPR004649 GO:0004523(InterPro)|GO:0016070(InterPro)
Hepe05g1236 232 PANTHER RIBONUCLEASE H2 SUBUNIT A 6 172 IPR001352 GO:0003723(InterPro)|GO:0004523(PANTHER)|GO:0004523(InterPro)|GO:0006298(PANTHER)|GO:0032299(PANTHER)|GO:0043137(PANTHER)
Hepe05g1236 232 FunFam Ribonuclease 1 183 - -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1236 K10743 - csv:101210143 319.701