Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1290 ATGTTTTTTTCACTTTCTCCATTTTTCAAATCCCCCGCCATTATTTCTCCCAAATTCTTCTTCTTCACCGCCCCGGTCGCCGCCGTCGCAACCACCATGTCTAGTTCCGATCACTCTCCCGCCACCTTTGAAAGACCTCGCTCCGTCATCAAGAAGATCCTTGCTAAACTCCAGCACGAAGGCGACGGCGCCGTCGTTCGTCGTGGCATCGGAAGAAACGATTTGAAGAATTTGGATCCGTTTCTCATGCTCGACGATTTCTCTGTTAGTCCGCCGGCTGGATTCCCCGACCATCCTCACAGAGGTTTTGAGACAGTGACCTACATGTTACAAGGAGGAATTACCCATCAAGATTTTGCTGGCCACAAGGGTACAATCAGAACAGGGGATGTCCAGTGGATGACAGCAGGAAGAGGAATTATCCATTCTGAAATGCCTGCTGGTGAAGGAGCACAAAAGGGATTGCAGCTATGGATCAATCTTGCATCCCATGACAAAATGATGGAGCCAAGGTATCAGGAGATCCCAAGCGACAACATTCCGAGAGCGGAGAAAGACGGTGTCGAAGTTCGAGTAATAGCAGGAGAGTCCATGGGAGTCCATTCGCCAATCTACACTCGAACTCCAACCATGTATCTTGACTTCACATTGAAACCAAAAGCTCAAGTGCATCAAAGCATCCCGGACACGTGGACGTCTTTCGTGTACGTAATCGACGGGGAAGGGGTGTTCGGGACCCCGAACTCGGGCCGGGTGGCGGCTCACCATGTGCTAGTATTAGGAGGTGGAAATGGGGTAAGTGTGTGGAATAGATCTTCAAAGCCATTGAGGTTTGTTCTGATTGGAGGGAAGCCTTTGAATGAACCAATTGTTCAATATGGACCATTTGTGATGAACTCACAATCTGAAATTGACCAAGCAATTGAAGACTACCATTATGGCAAAAATGGCTTTGAAATGGCAAAGTATTGGAGATCTCAGTGA 984 48.27 MFFSLSPFFKSPAIISPKFFFFTAPVAAVATTMSSSDHSPATFERPRSVIKKILAKLQHEGDGAVVRRGIGRNDLKNLDPFLMLDDFSVSPPAGFPDHPHRGFETVTYMLQGGITHQDFAGHKGTIRTGDVQWMTAGRGIIHSEMPAGEGAQKGLQLWINLASHDKMMEPRYQEIPSDNIPRAEKDGVEVRVIAGESMGVHSPIYTRTPTMYLDFTLKPKAQVHQSIPDTWTSFVYVIDGEGVFGTPNSGRVAAHHVLVLGGGNGVSVWNRSSKPLRFVLIGGKPLNEPIVQYGPFVMNSQSEIDQAIEDYHYGKNGFEMAKYWRSQ 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 60728926 60731326 + Hsped.05g12900.1 Hepe05g1290 570555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1290 327 CDD cupin_pirin_C 209 285 - -
Hepe05g1290 327 Gene3D Jelly Rolls 60 312 IPR014710 -
Hepe05g1290 327 PANTHER PIRIN-RELATED 34 327 IPR012093 -
Hepe05g1290 327 PIRSF Pirin 45 325 IPR012093 -
Hepe05g1290 327 Pfam Pirin C-terminal cupin domain 212 317 IPR008778 -
Hepe05g1290 327 FunFam pirin 60 192 - -
Hepe05g1290 327 CDD cupin_pirin_N 64 161 - -
Hepe05g1290 327 SUPERFAMILY RmlC-like cupins 47 325 IPR011051 -
Hepe05g1290 327 Pfam Pirin 66 159 IPR003829 -
Hepe05g1290 327 Gene3D Jelly Rolls 181 286 IPR014710 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1233 Hepe-Chr1:77561440 Hepe05g1290 Hepe-Chr5:60728926 2.02e-146 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1290 K06911 - csv:101205861 589.726