Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe05g1292 | ATGTACCAATCAAATTCCTCCTCTTCTTCCTCTCAGAAATCCATGGCCTCCCCCCACGGCGGCGCCGGTGTTGGAGGCAGCGGCGGCGCCGGTCTCACTCGGTACGGTTCCGCCCCTGGCTCTCTCCTGACCTCGGCGGTGGATTCTGTGATCGGGAATCGGCATCCGGACTCCGCCGCGTCGCACCGTACGCCGCCGTCGTTCGGCGGCCACTACTTCTCCTCGGCTGACTCCTCCGTCGTGGAGTCCTCTCGCAAGGTCGTTCAATCGTCATCGGCGGCGGCGGCGGCCTTGCAGCGGTCGTACGGAATCCACGATTTGGCACTAGGAGATTTCTCGACGGCTAGGAATTTCAATAGCAATGGTGGTCAATCGTCTTCCTCTTCGCCGTTGGTTCGCCAGAGAAGCTCGCCGGCTGGATTTCTCAGCCATCTCTCCGTCGCTGAACCAAACGGAGGATTTTCTTTGACGAGGGGAGGTGGAGGGCATGGAGTAGGAAGGCTGAAGTCCCAACTGAGCTTCAGTGGGCAAGATTCATTGTCTCAAATCTCTGAAGAAATGAGTGAAAGTCATGTTGTGGAGGGTGTCAACTCTTCTACAAATAATAATAATAATGGTTTTGCTATGGATTCTTGGGACACTTCTAATTCCATTGCTTTTGCTGCCCCTCAAGCCAAAAGATCCAAGCACCATTCTGATGCTGACTTCTTCAATTGCCTCACTGGCCTTGAGTCCCAGTTTAGCCTGCCGCAGACAAGTCTGGAAATGGCAACTGTAGAGAGATTGCTTCAAATTCCAGAAGACTCTGTTCCTTGTAAGATTCGAGCCAAGCGAGGCTGTGCCACTCATCCTCGTAGCATCGCCGAAAGGGAGAGGAGAACTAGAATCAGTGGAAAATTGAAGAAACTTCAAGAACTTGTTCCCAACATGGATAAGCAAACAAGCTATTCAGACATGTTGGACTTAGCAGTGCAGCATATCAAAGGCCTCCAAAATCAAATTCAGAAGCTTAACAAAGATGTTGAGAATTGCACCTGTGGAAGCAATGAATGCTCATAA | 1059 | 51.46 | MYQSNSSSSSSQKSMASPHGGAGVGGSGGAGLTRYGSAPGSLLTSAVDSVIGNRHPDSAASHRTPPSFGGHYFSSADSSVVESSRKVVQSSSAAAAALQRSYGIHDLALGDFSTARNFNSNGGQSSSSSPLVRQRSSPAGFLSHLSVAEPNGGFSLTRGGGGHGVGRLKSQLSFSGQDSLSQISEEMSESHVVEGVNSSTNNNNNGFAMDSWDTSNSIAFAAPQAKRSKHHSDADFFNCLTGLESQFSLPQTSLEMATVERLLQIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQHIKGLQNQIQKLNKDVENCTCGSNECS | 352 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 60767133 | 60775501 | - | Hsped.05g12920.1 | Hepe05g1292 | 570557 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe05g1292 | 352 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
Hepe05g1292 | 352 | Pfam | Helix-loop-helix DNA-binding domain | 286 | 331 | IPR011598 | GO:0046983(InterPro) | |
Hepe05g1292 | 352 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 283 | 343 | IPR036638 | GO:0046983(InterPro) | |
Hepe05g1292 | 352 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 98 | 339 | IPR045843 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER) | |
Hepe05g1292 | 352 | CDD | bHLH_AtbHLH_like | 285 | 337 | IPR045239 | - | |
Hepe05g1292 | 352 | Coils | Coil | 320 | 347 | - | - | |
Hepe05g1292 | 352 | FunFam | Transcription factor bHLH130 family | 281 | 349 | - | - | |
Hepe05g1292 | 352 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 280 | 330 | IPR011598 | GO:0046983(InterPro) | |
Hepe05g1292 | 352 | SMART | finulus | 286 | 336 | IPR011598 | GO:0046983(InterPro) | |
Hepe05g1292 | 352 | Gene3D | - | 281 | 347 | IPR036638 | GO:0046983(InterPro) | |
Hepe05g1292 | 352 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g1726 | Hepe-Chr3:74167000 | Hepe05g1292 | Hepe-Chr5:60767133 | 1.62e-35 | dispersed | |
Hepe05g1292 | Hepe-Chr5:60767133 | Hepe09g1096 | Hepe-Chr9:12261210 | 1.73e-38 | dispersed | |
Hepe05g1292 | Hepe-Chr5:60767133 | Hepe05g0556 | Hepe-Chr5:7775011 | 1.42e-42 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55629 | PF00010 | HLH | 9.30E-09 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe05g1292 | - | - | - | 0.0 |