Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe05g1299 | ATGGACAAGGAGAAACCACAATGCCATGGGGGAGGGTTTCTGCACCAATCAAGTCGTTACTCCCCGGGGTTTTCCTCTACTGAGGCAGCCTCATCTTCAATGTCATTCCCTCCATTGCCTCCGAGTGCTAATTCGGATTGGGGTCAATCTGGCCATGGAATATCAACCGATTCCAGTCGATTCAGCCATGATATTAGTCGGATGCCTGAAAATCCAAGGCGAAATGTCGGTCATAGGCGTGCTCATTCAGAGATCTTGACCCTCCCAGATGATATTTGTTTCGATAGTGACCTTGGTATCATTGGCGGAGCTGATGGGCCTTCTCTTTCTGATGATACTGAGGAAGATTTGTTGTCCATGTACCTTGACATGGATAAATTCAATTCCTCGTCCGCTACTTATACAACTCAAGTGGTGGATTCATCTTCCCCTGTTGTAGAATCAGCAGCAACTTCTACAGATGATATTGCTGTTGGTTTGAAGGAGAGGCCGAGAGTTAGACATCAGCATAGCCAGTCCATGGACGGCTTCGCAAACATCAAACCTGAGATGCTGGTCTCGGGGTCTGAAGATGGCTCTGCAGCTGATACCAAGAAATCCATGTCAGCTGCAAAGCTTGCTGATCTTGCATTGATTGACCCCAAACGTGCAAAAAGGATATGGGCAAACAGGCAGTCAGCTGCGCGGTCAAAGGAAAGAAAGATGCGGTACATTTCTGAGCTTGAACGGAAAGTTCAAACTTTGCAAACAGAGGCAACTTCTTTGTCTGCTCAGTTGACCCTCTTACAGAGAGACGCAAATGGTATCACTTCCGAGAATAGTGAACTAAAGCTGCGGTTGCAGACAATGGAACAGCAGGTTCACCTGCAAGACGCTTTAAATGAAGCACTGAAAGAAGAAATTCAGCATTTGAAAGTATTGACTGGCCAAGCAATGTCAAACGGTAGATCAATTACAAACTTTGCTTCCTTTGGAGCCGGCGGCCAACAATTCTATCCAAACAATCAAGCAGTGCATACTTTGTTAACCGCGCAGCAGTTTCAGCAACTTCAAATTCAATCGCAACAGCAACAACAACAGCAACAACATTTTCAGTACCAACAGTTACATCAGCTTCAGCAACAACAAACTGGAGACATCAGAATGAAAGGATCGATATCGTCTCAAAACTCAAAAGACTCTGCATCGGACACAAAGCCTCCTACCACTTGTTGA | 1215 | 45.6 | MDKEKPQCHGGGFLHQSSRYSPGFSSTEAASSSMSFPPLPPSANSDWGQSGHGISTDSSRFSHDISRMPENPRRNVGHRRAHSEILTLPDDICFDSDLGIIGGADGPSLSDDTEEDLLSMYLDMDKFNSSSATYTTQVVDSSSPVVESAATSTDDIAVGLKERPRVRHQHSQSMDGFANIKPEMLVSGSEDGSAADTKKSMSAAKLADLALIDPKRAKRIWANRQSAARSKERKMRYISELERKVQTLQTEATSLSAQLTLLQRDANGITSENSELKLRLQTMEQQVHLQDALNEALKEEIQHLKVLTGQAMSNGRSITNFASFGAGGQQFYPNNQAVHTLLTAQQFQQLQIQSQQQQQQQQHFQYQQLHQLQQQQTGDIRMKGSISSQNSKDSASDTKPPTTC | 404 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 61089221 | 61094490 | + | Hsped.05g12990.1 | Hepe05g1299 | 570564 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe05g1299 | 404 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 213 | 276 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe05g1299 | 404 | MobiDBLite | consensus disorder prediction | 376 | 404 | - | - | |
Hepe05g1299 | 404 | MobiDBLite | consensus disorder prediction | 63 | 79 | - | - | |
Hepe05g1299 | 404 | Pfam | bZIP transcription factor | 215 | 265 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe05g1299 | 404 | FunFam | probable transcription factor PosF21 | 214 | 267 | - | - | |
Hepe05g1299 | 404 | Gene3D | - | 214 | 266 | - | - | |
Hepe05g1299 | 404 | SUPERFAMILY | Leucine zipper domain | 215 | 265 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe05g1299 | 404 | MobiDBLite | consensus disorder prediction | 1 | 79 | - | - | |
Hepe05g1299 | 404 | MobiDBLite | consensus disorder prediction | 18 | 62 | - | - | |
Hepe05g1299 | 404 | CDD | bZIP_plant_RF2 | 216 | 265 | IPR044759 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe05g1299 | 404 | Coils | Coil | 231 | 300 | - | - | |
Hepe05g1299 | 404 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 62 | 377 | - | GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Hepe05g1299 | 404 | SMART | brlzneu | 211 | 275 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g0459 | Hepe-Chr2:4502107 | Hepe05g1299 | Hepe-Chr5:61089221 | 8.04e-43 | dispersed | |
Hepe05g1299 | Hepe-Chr5:61089221 | Hepe10g1387 | Hepe-Chr10:50227677 | 8.84e-53 | dispersed | |
Hepe05g1299 | Hepe-Chr5:61089221 | Hepe05g1302 | Hepe-Chr5:61127996 | 2.07e-178 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55630 | PF00170 | bZIP_1 | 8.10E-09 | CL0018 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe05g1299 | - | - | - | 0.0 |