Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1299 ATGGACAAGGAGAAACCACAATGCCATGGGGGAGGGTTTCTGCACCAATCAAGTCGTTACTCCCCGGGGTTTTCCTCTACTGAGGCAGCCTCATCTTCAATGTCATTCCCTCCATTGCCTCCGAGTGCTAATTCGGATTGGGGTCAATCTGGCCATGGAATATCAACCGATTCCAGTCGATTCAGCCATGATATTAGTCGGATGCCTGAAAATCCAAGGCGAAATGTCGGTCATAGGCGTGCTCATTCAGAGATCTTGACCCTCCCAGATGATATTTGTTTCGATAGTGACCTTGGTATCATTGGCGGAGCTGATGGGCCTTCTCTTTCTGATGATACTGAGGAAGATTTGTTGTCCATGTACCTTGACATGGATAAATTCAATTCCTCGTCCGCTACTTATACAACTCAAGTGGTGGATTCATCTTCCCCTGTTGTAGAATCAGCAGCAACTTCTACAGATGATATTGCTGTTGGTTTGAAGGAGAGGCCGAGAGTTAGACATCAGCATAGCCAGTCCATGGACGGCTTCGCAAACATCAAACCTGAGATGCTGGTCTCGGGGTCTGAAGATGGCTCTGCAGCTGATACCAAGAAATCCATGTCAGCTGCAAAGCTTGCTGATCTTGCATTGATTGACCCCAAACGTGCAAAAAGGATATGGGCAAACAGGCAGTCAGCTGCGCGGTCAAAGGAAAGAAAGATGCGGTACATTTCTGAGCTTGAACGGAAAGTTCAAACTTTGCAAACAGAGGCAACTTCTTTGTCTGCTCAGTTGACCCTCTTACAGAGAGACGCAAATGGTATCACTTCCGAGAATAGTGAACTAAAGCTGCGGTTGCAGACAATGGAACAGCAGGTTCACCTGCAAGACGCTTTAAATGAAGCACTGAAAGAAGAAATTCAGCATTTGAAAGTATTGACTGGCCAAGCAATGTCAAACGGTAGATCAATTACAAACTTTGCTTCCTTTGGAGCCGGCGGCCAACAATTCTATCCAAACAATCAAGCAGTGCATACTTTGTTAACCGCGCAGCAGTTTCAGCAACTTCAAATTCAATCGCAACAGCAACAACAACAGCAACAACATTTTCAGTACCAACAGTTACATCAGCTTCAGCAACAACAAACTGGAGACATCAGAATGAAAGGATCGATATCGTCTCAAAACTCAAAAGACTCTGCATCGGACACAAAGCCTCCTACCACTTGTTGA 1215 45.6 MDKEKPQCHGGGFLHQSSRYSPGFSSTEAASSSMSFPPLPPSANSDWGQSGHGISTDSSRFSHDISRMPENPRRNVGHRRAHSEILTLPDDICFDSDLGIIGGADGPSLSDDTEEDLLSMYLDMDKFNSSSATYTTQVVDSSSPVVESAATSTDDIAVGLKERPRVRHQHSQSMDGFANIKPEMLVSGSEDGSAADTKKSMSAAKLADLALIDPKRAKRIWANRQSAARSKERKMRYISELERKVQTLQTEATSLSAQLTLLQRDANGITSENSELKLRLQTMEQQVHLQDALNEALKEEIQHLKVLTGQAMSNGRSITNFASFGAGGQQFYPNNQAVHTLLTAQQFQQLQIQSQQQQQQQQHFQYQQLHQLQQQQTGDIRMKGSISSQNSKDSASDTKPPTTC 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 61089221 61094490 + Hsped.05g12990.1 Hepe05g1299 570564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1299 404 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 213 276 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe05g1299 404 MobiDBLite consensus disorder prediction 376 404 - -
Hepe05g1299 404 MobiDBLite consensus disorder prediction 63 79 - -
Hepe05g1299 404 Pfam bZIP transcription factor 215 265 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe05g1299 404 FunFam probable transcription factor PosF21 214 267 - -
Hepe05g1299 404 Gene3D - 214 266 - -
Hepe05g1299 404 SUPERFAMILY Leucine zipper domain 215 265 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe05g1299 404 MobiDBLite consensus disorder prediction 1 79 - -
Hepe05g1299 404 MobiDBLite consensus disorder prediction 18 62 - -
Hepe05g1299 404 CDD bZIP_plant_RF2 216 265 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe05g1299 404 Coils Coil 231 300 - -
Hepe05g1299 404 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 62 377 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Hepe05g1299 404 SMART brlzneu 211 275 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0459 Hepe-Chr2:4502107 Hepe05g1299 Hepe-Chr5:61089221 8.04e-43 dispersed
Hepe05g1299 Hepe-Chr5:61089221 Hepe10g1387 Hepe-Chr10:50227677 8.84e-53 dispersed
Hepe05g1299 Hepe-Chr5:61089221 Hepe05g1302 Hepe-Chr5:61127996 2.07e-178 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55630 PF00170 bZIP_1 8.10E-09 CL0018 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1299 - - - 0.0