Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1299 ATGGACAAGGAGAAACCACAATGCCATGGGGGAGGGTTTCTGCACCAATCAAGTCGTTACTCCCCGGGGTTTTCCTCTACTGAGGCAGCCTCATCTTCAATGTCATTCCCTCCATTGCCTCCGAGTGCTAATTCGGATTGGGGTCAATCTGGCCATGGAATATCAACCGATTCCAGTCGATTCAGCCATGATATTAGTCGGATGCCTGAAAATCCAAGGCGAAATGTCGGTCATAGGCGTGCTCATTCAGAGATCTTGACCCTCCCAGATGATATTTGTTTCGATAGTGACCTTGGTATCATTGGCGGAGCTGATGGGCCTTCTCTTTCTGATGATACTGAGGAAGATTTGTTGTCCATGTACCTTGACATGGATAAATTCAATTCCTCGTCCGCTACTTATACAACTCAAGTGGTGGATTCATCTTCCCCTGTTGTAGAATCAGCAGCAACTTCTACAGATGATATTGCTGTTGGTTTGAAGGAGAGGCCGAGAGTTAGACATCAGCATAGCCAGTCCATGGACGGCTTCGCAAACATCAAACCTGAGATGCTGGTCTCGGGGTCTGAAGATGGCTCTGCAGCTGATACCAAGAAATCCATGTCAGCTGCAAAGCTTGCTGATCTTGCATTGATTGACCCCAAACGTGCAAAAAGGATATGGGCAAACAGGCAGTCAGCTGCGCGGTCAAAGGAAAGAAAGATGCGGTACATTTCTGAGCTTGAACGGAAAGTTCAAACTTTGCAAACAGAGGCAACTTCTTTGTCTGCTCAGTTGACCCTCTTACAGAGAGACGCAAATGGTATCACTTCCGAGAATAGTGAACTAAAGCTGCGGTTGCAGACAATGGAACAGCAGGTTCACCTGCAAGACGCTTTAAATGAAGCACTGAAAGAAGAAATTCAGCATTTGAAAGTATTGACTGGCCAAGCAATGTCAAACGGTAGATCAATTACAAACTTTGCTTCCTTTGGAGCCGGCGGCCAACAATTCTATCCAAACAATCAAGCAGTGCATACTTTGTTAACCGCGCAGCAGTTTCAGCAACTTCAAATTCAATCGCAACAGCAACAACAACAGCAACAACATTTTCAGTACCAACAGTTACATCAGCTTCAGCAACAACAAACTGGAGACATCAGAATGAAAGGATCGATATCGTCTCAAAACTCAAAAGACTCTGCATCGGACACAAAGCCTCCTACCACTTGTTGA 1215 45.6 MDKEKPQCHGGGFLHQSSRYSPGFSSTEAASSSMSFPPLPPSANSDWGQSGHGISTDSSRFSHDISRMPENPRRNVGHRRAHSEILTLPDDICFDSDLGIIGGADGPSLSDDTEEDLLSMYLDMDKFNSSSATYTTQVVDSSSPVVESAATSTDDIAVGLKERPRVRHQHSQSMDGFANIKPEMLVSGSEDGSAADTKKSMSAAKLADLALIDPKRAKRIWANRQSAARSKERKMRYISELERKVQTLQTEATSLSAQLTLLQRDANGITSENSELKLRLQTMEQQVHLQDALNEALKEEIQHLKVLTGQAMSNGRSITNFASFGAGGQQFYPNNQAVHTLLTAQQFQQLQIQSQQQQQQQQHFQYQQLHQLQQQQTGDIRMKGSISSQNSKDSASDTKPPTTC 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 61089221 61094490 + Hsped.05g12990.1 Hepe05g1299 570564

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1299 404 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 213 276 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe05g1299 404 MobiDBLite consensus disorder prediction 376 404 - -
Hepe05g1299 404 MobiDBLite consensus disorder prediction 63 79 - -
Hepe05g1299 404 Pfam bZIP transcription factor 215 265 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe05g1299 404 FunFam probable transcription factor PosF21 214 267 - -
Hepe05g1299 404 Gene3D - 214 266 - -
Hepe05g1299 404 SUPERFAMILY Leucine zipper domain 215 265 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe05g1299 404 MobiDBLite consensus disorder prediction 1 79 - -
Hepe05g1299 404 MobiDBLite consensus disorder prediction 18 62 - -
Hepe05g1299 404 CDD bZIP_plant_RF2 216 265 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe05g1299 404 Coils Coil 231 300 - -
Hepe05g1299 404 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 62 377 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Hepe05g1299 404 SMART brlzneu 211 275 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1299 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0459 Hepe-Chr2:4502107 Hepe05g1299 Hepe-Chr5:61089221 8.04e-43 dispersed
Hepe05g1299 Hepe-Chr5:61089221 Hepe10g1387 Hepe-Chr10:50227677 8.84e-53 dispersed
Hepe05g1299 Hepe-Chr5:61089221 Hepe05g1302 Hepe-Chr5:61127996 2.07e-178 proximal
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Hepe06g0987 . 1 340 bZIP Transcription Factor Family AT2G35530 65.5 5.7e-102 368.2
Hepe05g0642 . 22 783 bZIP Transcription Factor Family AT2G40950 50.6 2.1e-168 589.7
Hepe01g0646 . 9 335 bZIP Transcription Factor Family AT2G40620 57.0 1.5e-85 313.5
Hepe10g1387 . 1 326 bZIP Transcription Factor Family AT2G40620 51.2 9.4e-72 267.7
Hepe02g0459 . 380 504 bZIP Transcription Factor Family AT2G40620 70.4 4.0e-38 156.0
Hepe02g0460 . 384 520 bZIP Transcription Factor Family AT2G40620 65.7 4.4e-37 152.5
Hepe08g0294 . 1 232 bZIP Transcription Factor Family AT4G35040 63.8 1.5e-68 256.5
Hepe02g0426 . 1 265 bZIP Transcription Factor Family AT4G35040 55.6 2.7e-57 219.2
Hepe10g0543 . 6 332 bZIP Transcription Factor Family AT5G06950 79.5 7.5e-137 483.8
Hepe01g0968 . 1 332 bZIP Transcription Factor Family AT5G06950 76.4 4.7e-131 464.5
Hepe02g2705 . 222 555 bZIP Transcription Factor Family AT5G06950 69.1 9.5e-116 413.7
Hepe05g0675 . 137 472 bZIP Transcription Factor Family AT5G06950 66.7 3.1e-106 382.1
Hepe05g0553 . 214 507 bZIP Transcription Factor Family AT5G06950 60.5 2.1e-91 332.8
Hepe07g1296 . 60 343 bZIP Transcription Factor Family AT5G06950 57.2 1.5e-84 310.1
Hepe08g0225 . 207 482 bZIP Transcription Factor Family AT5G06950 56.9 3.7e-83 305.4
Hepe07g0658 . 79 360 bZIP Transcription Factor Family AT5G06950 55.4 4.8e-75 278.5
Hepe07g1296 . 48 371 bZIP Transcription Factor Family AT1G08320 72.5 1.3e-129 459.9
Hepe08g0225 . 201 482 bZIP Transcription Factor Family AT1G08320 70.9 1.0e-110 397.1
Hepe10g0543 . 45 332 bZIP Transcription Factor Family AT1G08320 63.5 1.5e-98 356.7
Hepe05g0553 . 191 507 bZIP Transcription Factor Family AT1G08320 58.7 7.7e-95 344.4
Hepe01g0968 . 45 332 bZIP Transcription Factor Family AT1G08320 60.8 1.6e-92 336.7
Hepe02g2705 . 263 555 bZIP Transcription Factor Family AT1G08320 58.7 8.2e-89 324.3
Hepe05g0675 . 171 472 bZIP Transcription Factor Family AT1G08320 53.6 4.8e-81 298.5
Hepe08g0294 . 1 260 bZIP Transcription Factor Family AT2G16770 62.5 1.4e-71 266.5
Hepe02g0426 . 1 265 bZIP Transcription Factor Family AT2G16770 56.8 2.3e-61 232.6
Hepe10g0543 . 25 332 bZIP Transcription Factor Family AT5G06960 79.9 6.6e-127 450.7
Hepe01g0968 . 33 332 bZIP Transcription Factor Family AT5G06960 77.3 2.3e-119 425.6
Hepe02g2705 . 248 555 bZIP Transcription Factor Family AT5G06960 67.9 2.7e-104 375.6
Hepe05g0675 . 158 472 bZIP Transcription Factor Family AT5G06960 64.6 7.9e-96 347.4
Hepe05g0553 . 200 507 bZIP Transcription Factor Family AT5G06960 60.1 2.9e-90 328.9
Hepe07g1296 . 55 343 bZIP Transcription Factor Family AT5G06960 56.7 1.0e-82 303.9
Hepe08g0225 . 203 482 bZIP Transcription Factor Family AT5G06960 54.8 1.2e-80 297.0
Hepe07g0658 . 54 360 bZIP Transcription Factor Family AT5G06960 51.9 1.2e-72 270.4
Hepe02g0460 . 1 515 bZIP Transcription Factor Family AT4G38900 59.4 3.2e-132 469.2
Hepe02g0459 . 1 502 bZIP Transcription Factor Family AT4G38900 59.6 4.3e-129 458.8
Hepe02g2790 . 110 278 bZIP Transcription Factor Family AT4G38900 58.4 3.5e-38 156.8
Hepe10g1972 . 96 276 bZIP Transcription Factor Family AT4G38900 53.4 1.1e-36 151.8
Hepe10g1387 . 127 243 bZIP Transcription Factor Family AT4G38900 74.4 3.3e-36 150.2
Hepe02g0460 . 2 520 bZIP Transcription Factor Family AT2G21230 51.6 4.8e-98 355.5
Hepe02g0459 . 2 525 bZIP Transcription Factor Family AT2G21230 51.0 1.0e-95 347.8
Hepe10g1972 . 96 276 bZIP Transcription Factor Family AT2G21230 55.4 1.1e-36 151.8
Hepe02g0250 . 1 257 bZIP Transcription Factor Family AT2G42380 57.4 1.6e-57 219.9
Hepe08g1288 . 27 363 bZIP Transcription Factor Family AT1G45249 51.9 3.7e-77 285.8
Hepe10g0543 . 9 332 bZIP Transcription Factor Family AT3G12250 80.2 8.8e-138 486.9
Hepe01g0968 . 1 332 bZIP Transcription Factor Family AT3G12250 75.9 2.6e-129 458.8
Hepe02g2705 . 222 555 bZIP Transcription Factor Family AT3G12250 68.3 1.4e-114 409.8
Hepe05g0675 . 137 472 bZIP Transcription Factor Family AT3G12250 67.8 6.2e-107 384.4
Hepe05g0553 . 214 507 bZIP Transcription Factor Family AT3G12250 59.5 1.2e-89 327.0
Hepe07g1296 . 60 343 bZIP Transcription Factor Family AT3G12250 57.2 1.6e-83 306.6
Hepe08g0225 . 207 482 bZIP Transcription Factor Family AT3G12250 56.9 6.2e-83 304.7
Hepe07g0658 . 48 360 bZIP Transcription Factor Family AT3G12250 52.8 3.7e-75 278.9
Hepe02g2705 . 104 555 bZIP Transcription Factor Family AT1G68640 62.1 1.7e-139 493.0
Hepe10g0543 . 9 332 bZIP Transcription Factor Family AT1G68640 68.2 2.2e-115 412.9
Hepe01g0968 . 1 332 bZIP Transcription Factor Family AT1G68640 64.5 8.2e-110 394.4
Hepe05g0675 . 135 472 bZIP Transcription Factor Family AT1G68640 59.5 1.8e-96 350.1
Hepe05g0553 . 202 507 bZIP Transcription Factor Family AT1G68640 55.5 6.3e-86 315.1
Hepe07g1296 . 65 343 bZIP Transcription Factor Family AT1G68640 56.4 2.2e-83 306.6
Hepe08g0225 . 205 482 bZIP Transcription Factor Family AT1G68640 54.2 6.3e-78 288.5
Hepe10g1972 . 14 289 bZIP Transcription Factor Family AT1G43700 52.5 2.6e-60 229.6
Hepe02g2790 . 12 316 bZIP Transcription Factor Family AT1G43700 52.6 5.9e-60 228.4
Hepe10g1387 . 32 202 bZIP Transcription Factor Family AT1G06850 53.0 8.1e-37 151.0
Hepe10g0263 . 1 148 bZIP Transcription Factor Family AT5G11260 64.4 1.1e-36 150.2
Hepe05g1302 . 51 370 bZIP Transcription Factor Family AT2G31370 71.3 6.1e-109 391.3
Hepe05g1299 . 37 351 bZIP Transcription Factor Family AT2G31370 68.6 9.1e-105 377.5
Hepe01g0646 . 25 242 bZIP Transcription Factor Family AT2G31370 51.0 1.5e-46 184.1
Hepe02g2790 . 142 299 bZIP Transcription Factor Family AT2G31370 61.6 1.6e-40 164.1
Hepe02g2851 . 17 322 bZIP Transcription Factor Family AT3G56850 58.2 6.6e-76 281.2
Hepe06g0987 . 33 342 bZIP Transcription Factor Family AT1G32150 67.1 3.1e-97 352.4
Hepe05g1302 . 12 364 bZIP Transcription Factor Family AT1G06070 68.5 1.6e-120 429.9
Hepe05g1299 . 1 350 bZIP Transcription Factor Family AT1G06070 67.3 4.2e-116 415.2
Hepe02g2790 . 142 317 bZIP Transcription Factor Family AT1G06070 59.6 3.6e-43 172.9
Hepe02g0460 . 384 534 bZIP Transcription Factor Family AT1G06070 61.4 4.6e-38 156.0
Hepe02g0459 . 368 512 bZIP Transcription Factor Family AT1G06070 63.9 6.0e-38 155.6
Hepe08g1288 . 27 363 bZIP Transcription Factor Family AT1G45249 51.9 3.7e-77 285.8
Hepe06g0987 . 1 340 bZIP Transcription Factor Family AT2G35530 65.5 5.7e-102 368.2
Hepe05g0642 . 22 783 bZIP Transcription Factor Family AT2G40950 50.6 2.1e-168 589.7
Hepe01g0646 . 9 335 bZIP Transcription Factor Family AT2G40620 57.0 1.5e-85 313.5
Hepe10g1387 . 1 326 bZIP Transcription Factor Family AT2G40620 51.2 9.4e-72 267.7
Hepe02g0459 . 380 504 bZIP Transcription Factor Family AT2G40620 70.4 4.0e-38 156.0
Hepe02g0460 . 384 520 bZIP Transcription Factor Family AT2G40620 65.7 4.4e-37 152.5
Hepe08g0294 . 1 232 bZIP Transcription Factor Family AT4G35040 63.8 1.5e-68 256.5
Hepe02g0426 . 1 265 bZIP Transcription Factor Family AT4G35040 55.6 2.7e-57 219.2
Hepe10g0543 . 6 332 bZIP Transcription Factor Family AT5G06950 79.5 7.5e-137 483.8
Hepe01g0968 . 1 332 bZIP Transcription Factor Family AT5G06950 76.4 4.7e-131 464.5
Hepe02g2705 . 222 555 bZIP Transcription Factor Family AT5G06950 69.1 9.5e-116 413.7
Hepe05g0675 . 137 472 bZIP Transcription Factor Family AT5G06950 66.7 3.1e-106 382.1
Hepe05g0553 . 214 507 bZIP Transcription Factor Family AT5G06950 60.5 2.1e-91 332.8
Hepe07g1296 . 60 343 bZIP Transcription Factor Family AT5G06950 57.2 1.5e-84 310.1
Hepe08g0225 . 207 482 bZIP Transcription Factor Family AT5G06950 56.9 3.7e-83 305.4
Hepe07g0658 . 79 360 bZIP Transcription Factor Family AT5G06950 55.4 4.8e-75 278.5
Hepe07g1296 . 48 371 bZIP Transcription Factor Family AT1G08320 72.5 1.3e-129 459.9
Hepe08g0225 . 201 482 bZIP Transcription Factor Family AT1G08320 70.9 1.0e-110 397.1
Hepe10g0543 . 45 332 bZIP Transcription Factor Family AT1G08320 63.5 1.5e-98 356.7
Hepe05g0553 . 191 507 bZIP Transcription Factor Family AT1G08320 58.7 7.7e-95 344.4
Hepe01g0968 . 45 332 bZIP Transcription Factor Family AT1G08320 60.8 1.6e-92 336.7
Hepe02g2705 . 263 555 bZIP Transcription Factor Family AT1G08320 58.7 8.2e-89 324.3
Hepe05g0675 . 171 472 bZIP Transcription Factor Family AT1G08320 53.6 4.8e-81 298.5
Hepe08g0294 . 1 260 bZIP Transcription Factor Family AT2G16770 62.5 1.4e-71 266.5
Hepe02g0426 . 1 265 bZIP Transcription Factor Family AT2G16770 56.8 2.3e-61 232.6
Hepe10g0543 . 25 332 bZIP Transcription Factor Family AT5G06960 79.9 6.6e-127 450.7
Hepe01g0968 . 33 332 bZIP Transcription Factor Family AT5G06960 77.3 2.3e-119 425.6
Hepe02g2705 . 248 555 bZIP Transcription Factor Family AT5G06960 67.9 2.7e-104 375.6
Hepe05g0675 . 158 472 bZIP Transcription Factor Family AT5G06960 64.6 7.9e-96 347.4
Hepe05g0553 . 200 507 bZIP Transcription Factor Family AT5G06960 60.1 2.9e-90 328.9
Hepe07g1296 . 55 343 bZIP Transcription Factor Family AT5G06960 56.7 1.0e-82 303.9
Hepe08g0225 . 203 482 bZIP Transcription Factor Family AT5G06960 54.8 1.2e-80 297.0
Hepe07g0658 . 54 360 bZIP Transcription Factor Family AT5G06960 51.9 1.2e-72 270.4
Hepe02g0460 . 1 515 bZIP Transcription Factor Family AT4G38900 59.4 3.2e-132 469.2
Hepe02g0459 . 1 502 bZIP Transcription Factor Family AT4G38900 59.6 4.3e-129 458.8
Hepe02g2790 . 110 278 bZIP Transcription Factor Family AT4G38900 58.4 3.5e-38 156.8
Hepe10g1972 . 96 276 bZIP Transcription Factor Family AT4G38900 53.4 1.1e-36 151.8
Hepe10g1387 . 127 243 bZIP Transcription Factor Family AT4G38900 74.4 3.3e-36 150.2
Hepe02g0460 . 2 520 bZIP Transcription Factor Family AT2G21230 51.6 4.8e-98 355.5
Hepe02g0459 . 2 525 bZIP Transcription Factor Family AT2G21230 51.0 1.0e-95 347.8
Hepe10g1972 . 96 276 bZIP Transcription Factor Family AT2G21230 55.4 1.1e-36 151.8
Hepe02g0250 . 1 257 bZIP Transcription Factor Family AT2G42380 57.4 1.6e-57 219.9
Hepe10g0543 . 9 332 bZIP Transcription Factor Family AT3G12250 80.2 8.8e-138 486.9
Hepe01g0968 . 1 332 bZIP Transcription Factor Family AT3G12250 75.9 2.6e-129 458.8
Hepe02g2705 . 222 555 bZIP Transcription Factor Family AT3G12250 68.3 1.4e-114 409.8
Hepe05g0675 . 137 472 bZIP Transcription Factor Family AT3G12250 67.8 6.2e-107 384.4
Hepe05g0553 . 214 507 bZIP Transcription Factor Family AT3G12250 59.5 1.2e-89 327.0
Hepe07g1296 . 60 343 bZIP Transcription Factor Family AT3G12250 57.2 1.6e-83 306.6
Hepe08g0225 . 207 482 bZIP Transcription Factor Family AT3G12250 56.9 6.2e-83 304.7
Hepe07g0658 . 48 360 bZIP Transcription Factor Family AT3G12250 52.8 3.7e-75 278.9
Hepe02g2705 . 104 555 bZIP Transcription Factor Family AT1G68640 62.1 1.7e-139 493.0
Hepe10g0543 . 9 332 bZIP Transcription Factor Family AT1G68640 68.2 2.2e-115 412.9
Hepe01g0968 . 1 332 bZIP Transcription Factor Family AT1G68640 64.5 8.2e-110 394.4
Hepe05g0675 . 135 472 bZIP Transcription Factor Family AT1G68640 59.5 1.8e-96 350.1
Hepe05g0553 . 202 507 bZIP Transcription Factor Family AT1G68640 55.5 6.3e-86 315.1
Hepe07g1296 . 65 343 bZIP Transcription Factor Family AT1G68640 56.4 2.2e-83 306.6
Hepe08g0225 . 205 482 bZIP Transcription Factor Family AT1G68640 54.2 6.3e-78 288.5
Hepe10g1972 . 14 289 bZIP Transcription Factor Family AT1G43700 52.5 2.6e-60 229.6
Hepe02g2790 . 12 316 bZIP Transcription Factor Family AT1G43700 52.6 5.9e-60 228.4
Hepe10g1387 . 32 202 bZIP Transcription Factor Family AT1G06850 53.0 8.1e-37 151.0
Hepe10g0263 . 1 148 bZIP Transcription Factor Family AT5G11260 64.4 1.1e-36 150.2
Hepe05g1302 . 51 370 bZIP Transcription Factor Family AT2G31370 71.3 6.1e-109 391.3
Hepe05g1299 . 37 351 bZIP Transcription Factor Family AT2G31370 68.6 9.1e-105 377.5
Hepe01g0646 . 25 242 bZIP Transcription Factor Family AT2G31370 51.0 1.5e-46 184.1
Hepe02g2790 . 142 299 bZIP Transcription Factor Family AT2G31370 61.6 1.6e-40 164.1
Hepe02g2851 . 17 322 bZIP Transcription Factor Family AT3G56850 58.2 6.6e-76 281.2
Hepe06g0987 . 33 342 bZIP Transcription Factor Family AT1G32150 67.1 3.1e-97 352.4
Hepe05g1302 . 12 364 bZIP Transcription Factor Family AT1G06070 68.5 1.6e-120 429.9
Hepe05g1299 . 1 350 bZIP Transcription Factor Family AT1G06070 67.3 4.2e-116 415.2
Hepe02g2790 . 142 317 bZIP Transcription Factor Family AT1G06070 59.6 3.6e-43 172.9
Hepe02g0460 . 384 534 bZIP Transcription Factor Family AT1G06070 61.4 4.6e-38 156.0
Hepe02g0459 . 368 512 bZIP Transcription Factor Family AT1G06070 63.9 6.0e-38 155.6
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001517 2 6 2 1 2 2 3 2 2 2 2 2 3 3 2 2 2 2 3 2 2 1 2 2 2 2 3 4 6 1 72
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55630 PF00170 bZIP_1 8.10E-09 CL0018 Hepe TF