Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe05g1302 | ATGGAGAAGGACAACCCCCAAAGCCATTCTGGTGGAGGATTTCTACCCCCATCGAGTCGTTACTCAGGTCTCTCACCAACTGGAAGCGGTTTCAGTGGAAAATCTGAGGCAAACTCGTCTTCAATGTTGCTTCCTCCAATGGCTTCAGTTGCTAATTCCGATTCGAGTCAATTTGGTCGTGGAATGTCCACTGATTCTAATCGGTTCAGCCATGATATTAGTCGGATGCCTGATAACCCGCCGAGAAATATTGGTCACAGACGTGCACATTCAGAAATACTGACCCTTCCTGATGATCTTTGTTTCGATAATGACCTTGGTGTCATTGGCTGTGCTGATGGCCCTTCTTTTTCTGATGATACTGAGGAAGATTTGTTGTCCATGTACCTTGACATGGACAAATTCAATTCTTCGACTGCTACCTCTGCAATACAAGTTGGCGGGTCATCTTATGCTGCTGTAGAAGTGAGATCAACTCCTACATCTGCAATTGGAGCAACAACTTCTAAAGATGATGCTGCCATTGGTTTGAAGGAGAGGCCGAGAGTTAGGCACCAACACAGTCAGTCCATGGATGGCTTGTCAACCATAAAGCCTGAGATGCTTGTCTCTGAAGATGTCTCGTCAGCTGATTCCAAGAAAGCCATGTCAGCTACAAAGCTTGCTGAGCTTGCGCTAATTGACCCCAAACGTGCAAAGAGGATATGGGCAAATAGACAGTCAGCTGCTAGGTCAAAGGAAAGAAAGATGCGGTACATTGGTGAGCTTGAACGGAAAGTTCTGACTCTGCAAACAGAGGCAACTTCTTTATCTGCTCAGTTAACCCTCTTACAGAGAGATACAAACGGTCTTACTGCTGAGAACAGTGAACTAAAGCTGCGGTTGCAGACAATGGAGCAGCAGGTTCACCTGCAAGATGCTCTAAATGAAGCACTCAAAGAGGAAATTCAGCATTTGAAATTATTGACTGGCCAATCAATCCCCAATGGCGGATCAATTACAAACTATGCTTCCTATGGAGCTGGCCAACAATTTTACCCAAACAATCAAGCAATGCACACTTTGTTAACTGCTCAGCAGTTTCAGCAACTTCATATCCACTCACAGCAGCAGCAGCAGCAGCAGCAACAACAACAACATTTCCAGTACCATCAGCTTCATCATCTTCAGCAACAACCAACTGGAGAGATTAAAATGAAAGGATCGAGCTCTTCTTCGAGTCTGAAAGACTACACATCAGATACGTCCTCTCACACTTGTTGA | 1263 | 45.05 | MEKDNPQSHSGGGFLPPSSRYSGLSPTGSGFSGKSEANSSSMLLPPMASVANSDSSQFGRGMSTDSNRFSHDISRMPDNPPRNIGHRRAHSEILTLPDDLCFDNDLGVIGCADGPSFSDDTEEDLLSMYLDMDKFNSSTATSAIQVGGSSYAAVEVRSTPTSAIGATTSKDDAAIGLKERPRVRHQHSQSMDGLSTIKPEMLVSEDVSSADSKKAMSATKLAELALIDPKRAKRIWANRQSAARSKERKMRYIGELERKVLTLQTEATSLSAQLTLLQRDTNGLTAENSELKLRLQTMEQQVHLQDALNEALKEEIQHLKLLTGQSIPNGGSITNYASYGAGQQFYPNNQAMHTLLTAQQFQQLHIHSQQQQQQQQQQQHFQYHQLHHLQQQPTGEIKMKGSSSSSSLKDYTSDTSSHTC | 420 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 61127996 | 61132964 | + | Hsped.05g13020.1 | Hepe05g1302 | 570567 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe05g1302 | 420 | SMART | brlzneu | 226 | 290 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe05g1302 | 420 | FunFam | probable transcription factor PosF21 | 229 | 282 | - | - | |
Hepe05g1302 | 420 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 70 | 393 | - | GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Hepe05g1302 | 420 | Coils | Coil | 281 | 315 | - | - | |
Hepe05g1302 | 420 | MobiDBLite | consensus disorder prediction | 11 | 70 | - | - | |
Hepe05g1302 | 420 | Gene3D | - | 229 | 303 | - | - | |
Hepe05g1302 | 420 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 228 | 291 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe05g1302 | 420 | Coils | Coil | 253 | 273 | - | - | |
Hepe05g1302 | 420 | CDD | bZIP_plant_RF2 | 231 | 280 | IPR044759 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe05g1302 | 420 | MobiDBLite | consensus disorder prediction | 1 | 84 | - | - | |
Hepe05g1302 | 420 | MobiDBLite | consensus disorder prediction | 391 | 420 | - | - | |
Hepe05g1302 | 420 | Pfam | bZIP transcription factor | 230 | 284 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe05g1302 | 420 | SUPERFAMILY | Leucine zipper domain | 230 | 281 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe05g1302 | Hepe-Chr5:61127996 | Hepe10g1387 | Hepe-Chr10:50227677 | 3.63e-52 | dispersed | |
Hepe05g1299 | Hepe-Chr5:61089221 | Hepe05g1302 | Hepe-Chr5:61127996 | 2.07e-178 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55631 | PF00170 | bZIP_1 | 5.30E-08 | CL0018 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe05g1302 | - | - | - | 0.0 |