Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1302 ATGGAGAAGGACAACCCCCAAAGCCATTCTGGTGGAGGATTTCTACCCCCATCGAGTCGTTACTCAGGTCTCTCACCAACTGGAAGCGGTTTCAGTGGAAAATCTGAGGCAAACTCGTCTTCAATGTTGCTTCCTCCAATGGCTTCAGTTGCTAATTCCGATTCGAGTCAATTTGGTCGTGGAATGTCCACTGATTCTAATCGGTTCAGCCATGATATTAGTCGGATGCCTGATAACCCGCCGAGAAATATTGGTCACAGACGTGCACATTCAGAAATACTGACCCTTCCTGATGATCTTTGTTTCGATAATGACCTTGGTGTCATTGGCTGTGCTGATGGCCCTTCTTTTTCTGATGATACTGAGGAAGATTTGTTGTCCATGTACCTTGACATGGACAAATTCAATTCTTCGACTGCTACCTCTGCAATACAAGTTGGCGGGTCATCTTATGCTGCTGTAGAAGTGAGATCAACTCCTACATCTGCAATTGGAGCAACAACTTCTAAAGATGATGCTGCCATTGGTTTGAAGGAGAGGCCGAGAGTTAGGCACCAACACAGTCAGTCCATGGATGGCTTGTCAACCATAAAGCCTGAGATGCTTGTCTCTGAAGATGTCTCGTCAGCTGATTCCAAGAAAGCCATGTCAGCTACAAAGCTTGCTGAGCTTGCGCTAATTGACCCCAAACGTGCAAAGAGGATATGGGCAAATAGACAGTCAGCTGCTAGGTCAAAGGAAAGAAAGATGCGGTACATTGGTGAGCTTGAACGGAAAGTTCTGACTCTGCAAACAGAGGCAACTTCTTTATCTGCTCAGTTAACCCTCTTACAGAGAGATACAAACGGTCTTACTGCTGAGAACAGTGAACTAAAGCTGCGGTTGCAGACAATGGAGCAGCAGGTTCACCTGCAAGATGCTCTAAATGAAGCACTCAAAGAGGAAATTCAGCATTTGAAATTATTGACTGGCCAATCAATCCCCAATGGCGGATCAATTACAAACTATGCTTCCTATGGAGCTGGCCAACAATTTTACCCAAACAATCAAGCAATGCACACTTTGTTAACTGCTCAGCAGTTTCAGCAACTTCATATCCACTCACAGCAGCAGCAGCAGCAGCAGCAACAACAACAACATTTCCAGTACCATCAGCTTCATCATCTTCAGCAACAACCAACTGGAGAGATTAAAATGAAAGGATCGAGCTCTTCTTCGAGTCTGAAAGACTACACATCAGATACGTCCTCTCACACTTGTTGA 1263 45.05 MEKDNPQSHSGGGFLPPSSRYSGLSPTGSGFSGKSEANSSSMLLPPMASVANSDSSQFGRGMSTDSNRFSHDISRMPDNPPRNIGHRRAHSEILTLPDDLCFDNDLGVIGCADGPSFSDDTEEDLLSMYLDMDKFNSSTATSAIQVGGSSYAAVEVRSTPTSAIGATTSKDDAAIGLKERPRVRHQHSQSMDGLSTIKPEMLVSEDVSSADSKKAMSATKLAELALIDPKRAKRIWANRQSAARSKERKMRYIGELERKVLTLQTEATSLSAQLTLLQRDTNGLTAENSELKLRLQTMEQQVHLQDALNEALKEEIQHLKLLTGQSIPNGGSITNYASYGAGQQFYPNNQAMHTLLTAQQFQQLHIHSQQQQQQQQQQQHFQYHQLHHLQQQPTGEIKMKGSSSSSSLKDYTSDTSSHTC 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 61127996 61132964 + Hsped.05g13020.1 Hepe05g1302 570567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1302 420 SMART brlzneu 226 290 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe05g1302 420 FunFam probable transcription factor PosF21 229 282 - -
Hepe05g1302 420 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 70 393 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Hepe05g1302 420 Coils Coil 281 315 - -
Hepe05g1302 420 MobiDBLite consensus disorder prediction 11 70 - -
Hepe05g1302 420 Gene3D - 229 303 - -
Hepe05g1302 420 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 228 291 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe05g1302 420 Coils Coil 253 273 - -
Hepe05g1302 420 CDD bZIP_plant_RF2 231 280 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe05g1302 420 MobiDBLite consensus disorder prediction 1 84 - -
Hepe05g1302 420 MobiDBLite consensus disorder prediction 391 420 - -
Hepe05g1302 420 Pfam bZIP transcription factor 230 284 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe05g1302 420 SUPERFAMILY Leucine zipper domain 230 281 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1302 Hepe-Chr5:61127996 Hepe10g1387 Hepe-Chr10:50227677 3.63e-52 dispersed
Hepe05g1299 Hepe-Chr5:61089221 Hepe05g1302 Hepe-Chr5:61127996 2.07e-178 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55631 PF00170 bZIP_1 5.30E-08 CL0018 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1302 - - - 0.0