Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1353 ATGGCTCTCGACGCCGAAGCGGCACCAGCGGCGGAGTTGGCGCTTGCTGATACCGACATCAACTGGAACAGGTTGAACAAGACAAAGTTTCATATAATTGGGGCAATACTCTTTACTGCTCAGTCAGCCTTGTTACATCCAACATCAGTTGTAAAAACTAGAATGCAAGTTGCTGGATCTGGTCTATCTCACATGCGTGGACGGTCAGTTTTCTGGAATATATTGAAGTCTGATGGAATCTCTGGCTTATATAGAGGTTTTGGTACTTCAGCGATTGGATCATTACCTGGTAGAGTGTTGGCTTTAACATCCCTAGAAGTATCAAAAGACATAATGTTGAAATATACCGGAGGTCTAGATATGTCCGAAGCAACACGCGTTGGCCTTGCTAATGGAGTGGCAGGCATGATCTCAAATTTAGTTTCATGCATATACTATGTGCCATTGGACGTGACTTGCCAGAGGCTGATGGTTCAAGGGCTACCTGGAACCACTTTCTGCAATGGCCCAGTTGATGTTGTCAGAAAAGTGATGAAAGCTGAAGGATTTCGTGGTTTATATAGGGGTTTTGGATTAACGGCTGTAACTCAATCCCCAGCATCTGCTCTCTGGTGGGGTGTTTATGGTTCTGCTCAGCATATTATCTGGAGGAGCTTAGACTATCGAGATAGCATGGAGAAGAAACCTTCTCACATGGAGATGGTGACGGTTCAGGCTGCAGCAGGAATGGTGGCAGGTGCTTGTTCCTCTGTTATCACGACTCCTGTAGACACAGTAAAGACGCGACTTCAGGTGATTGATAACTATGGAATTGGAAGACCATCTGTGCTGAAGACTACAAGAGCACTTCTCAAGGAAGATGGATGGTTGGGATTTTATAGAGGCTTTGGACCCCGGTTTTTGAACATGTCACTTTATGGAACTACAATGATAGTCACTTATGAACTGATCAGAAGAAAGATGCCTGGCCTTACAATCGGCGATACAATACCCAATCTTCAAGCTGATAGCACCCATGGAAAGATCACTTTACATGATTACATCGGCGGCAGCTGGGCCATCATCTTCTCTCACCCAGGTGATTTCACTCCAGTTTGTACCACGGAGCTGGGGATGATGGCTGCTTACGCGGAGGAGTTTGGTCGAAGGGGTGTGAAGCTCATAGGGTTGTCTTGCGATGATGTTCAATCTCATACTGAGTGGATTAAGGATATCGAAGCCTACAATAAAGGGAAGAAAGTGACATATCCAATACTGGCGGATCCGGAAGGGGAGATCATCAAGGAACTGAACATGGTCGACCCCGACGAGAAAGACTCGTCGGGCAAGCCGGTGCCATCGCGGGCATTGCACATAATCGGTCCAGACAAGAAGGTGAAGCTGAGCTTCCTGTATCCAGCAAGTACTGGGAGGAACATGGAGGAAGTGGTGAGGGTCTTGGAGTCGTTGCAGAAGGCTGCAAAGCACAGGGTGGCCACCCCAGTGAACTGGAAACCGGGCGAAAAGTGCGTTATCGCACCGAATGTGAGTAATGAGGAGGCCAAGAAAATGTTTCCTCAAGGGTTTGAAACAGCGGAGCTTCCATCAAAGAAGGAATACTTGCGCTTCACTGCTGTGTGA 1620 47.28 MALDAEAAPAAELALADTDINWNRLNKTKFHIIGAILFTAQSALLHPTSVVKTRMQVAGSGLSHMRGRSVFWNILKSDGISGLYRGFGTSAIGSLPGRVLALTSLEVSKDIMLKYTGGLDMSEATRVGLANGVAGMISNLVSCIYYVPLDVTCQRLMVQGLPGTTFCNGPVDVVRKVMKAEGFRGLYRGFGLTAVTQSPASALWWGVYGSAQHIIWRSLDYRDSMEKKPSHMEMVTVQAAAGMVAGACSSVITTPVDTVKTRLQVIDNYGIGRPSVLKTTRALLKEDGWLGFYRGFGPRFLNMSLYGTTMIVTYELIRRKMPGLTIGDTIPNLQADSTHGKITLHDYIGGSWAIIFSHPGDFTPVCTTELGMMAAYAEEFGRRGVKLIGLSCDDVQSHTEWIKDIEAYNKGKKVTYPILADPEGEIIKELNMVDPDEKDSSGKPVPSRALHIIGPDKKVKLSFLYPASTGRNMEEVVRVLESLQKAAKHRVATPVNWKPGEKCVIAPNVSNEEAKKMFPQGFETAELPSKKEYLRFTAV 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 61943097 61949617 - Hsped.05g13530.1 Hepe05g1353 570618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1353 539 Pfam Mitochondrial carrier protein 32 115 IPR018108 -
Hepe05g1353 539 Pfam Mitochondrial carrier protein 237 321 IPR018108 -
Hepe05g1353 539 Pfam Mitochondrial carrier protein 130 216 IPR018108 -
Hepe05g1353 539 CDD PRX_1cys 326 537 IPR045020 GO:0051920(InterPro)|GO:0098869(InterPro)
Hepe05g1353 539 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 7 319 - -
Hepe05g1353 539 ProSiteProfiles Solute carrier (Solcar) repeat profile. 126 214 IPR018108 -
Hepe05g1353 539 FunFam Peroxiredoxin PRX1 324 471 - -
Hepe05g1353 539 Gene3D Antioxidant, Horf6; Chain A, domain2 472 539 - -
Hepe05g1353 539 Gene3D Mitochondrial carrier domain 122 323 IPR023395 -
Hepe05g1353 539 FunFam 1-Cys peroxiredoxin 472 539 - -
Hepe05g1353 539 ProSiteProfiles Solute carrier (Solcar) repeat profile. 28 111 IPR018108 -
Hepe05g1353 539 Pfam C-terminal domain of 1-Cys peroxiredoxin 483 520 IPR019479 GO:0051920(InterPro)
Hepe05g1353 539 SUPERFAMILY Thioredoxin-like 324 537 IPR036249 -
Hepe05g1353 539 ProSiteProfiles Solute carrier (Solcar) repeat profile. 233 320 IPR018108 -
Hepe05g1353 539 Pfam AhpC/TSA family 326 460 IPR000866 GO:0016209(InterPro)|GO:0016491(InterPro)
Hepe05g1353 539 ProSiteProfiles Thioredoxin domain profile. 324 485 IPR013766 -
Hepe05g1353 539 SUPERFAMILY Mitochondrial carrier 23 316 IPR023395 -
Hepe05g1353 539 Gene3D Glutaredoxin 324 471 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1443 Hepe-Chr3:71193598 Hepe05g1353 Hepe-Chr5:61943097 1.36e-68 dispersed
Hepe03g2136 Hepe-Chr3:79463852 Hepe05g1353 Hepe-Chr5:61943097 1.53e-08 dispersed
Hepe05g1353 Hepe-Chr5:61943097 Hepe02g3214 Hepe-Chr2:81683422 1.47e-99 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1353 K15121 - csv:101213375 588.571