Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1368 ATGGAGAAAAAATTTCAAGACTCGATAATGGGGTCTGAAAATTCTGCCGGATTTTACTCTCCGGCGACTAATTTTGGTTTTTCCGGTATGTTCGACATGCCATGTGATGATCATGATCATAAAGCTGCTTCTTGTTCTTCTAATTCCTCCTTTGACTTATTTGGTGCTGAAATTGAAATGGGAATCCATGATTTTTATAATAATCCTTCTTCTTCTTCTTCTTCTTTGTTCGATTTGCTTTCTACGGCGGCGCCGCCTCTTTCTTCCCCGGCTTCCACCGTCCCGGAGTCGTCGGAGGTTCTCAATGCCCCGGCGACGCCTAATTCCTCCTCGGTTTCTTCCTCCTCCAACGAAGCTGCAGCCATTGAAGAGGTTGACAAGAACAACAACATTGAGAAGGCTTCTTCTAAAGTGTTGAAGCCAAAAAAGAAGAGCCAGAAGAAGCAAAGAGAACCCAGATTTGCTTTCATGACAAAGAGTGATATTGATCATCTCGACGACGGCTACCGGTGGCGGAAGTACGGCCAAAAAGCCGTGAAGAACAGCCCTTATCCGAGAAGCTACTATCGTTGCACCACACCGGGGTGCGGTGTGAAGAAGAGGGTGGAGCGGTCGTCGGACGACCATTCGATCGTCGTAACGACGTACGAAGGCCAACACACCCACCAAAGTCCAGTAATGCCGCGAGGGAGTATCAGAATCCTTCCGGAATCCACGAACTGCGGCCTCATCCCCGATCACGCCGCCACCACCACAGGACTTTTATTCCAACAACACAACACTCCCCAGCTCTTCATGTATAGCCCTCCGCCGCCATTCGTAACAATCAACTCGTCGTCAGCAAGTCCTCGTCCTCCGTCTTCCTTCCCACCGCCACTGCCATCGTCATCGCCAACGCCGTTATCGTCTCAAGCTTCCCTGCTCCGAGACCATGGGCTTCTACAGGACTTGGTGCCATTACAAATGAGGAAGGAACCAAAAGATGATTAA 990 49.6 MEKKFQDSIMGSENSAGFYSPATNFGFSGMFDMPCDDHDHKAASCSSNSSFDLFGAEIEMGIHDFYNNPSSSSSSLFDLLSTAAPPLSSPASTVPESSEVLNAPATPNSSSVSSSSNEAAAIEEVDKNNNIEKASSKVLKPKKKSQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTPGCGVKKRVERSSDDHSIVVTTYEGQHTHQSPVMPRGSIRILPESTNCGLIPDHAATTTGLLFQQHNTPQLFMYSPPPPFVTINSSSASPRPPSSFPPPLPSSSPTPLSSQASLLRDHGLLQDLVPLQMRKEPKDD 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 62322167 62323967 - Hsped.05g13680.1 Hepe05g1368 570633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1368 329 MobiDBLite consensus disorder prediction 87 151 - -
Hepe05g1368 329 SMART WRKY_cls 165 224 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe05g1368 329 MobiDBLite consensus disorder prediction 276 329 - -
Hepe05g1368 329 FunFam WRKY transcription factor 57 151 225 - -
Hepe05g1368 329 MobiDBLite consensus disorder prediction 87 123 - -
Hepe05g1368 329 Gene3D WRKY domain 149 226 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe05g1368 329 ProSiteProfiles WRKY domain profile. 160 225 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe05g1368 329 MobiDBLite consensus disorder prediction 284 298 - -
Hepe05g1368 329 MobiDBLite consensus disorder prediction 125 139 - -
Hepe05g1368 329 Pfam WRKY DNA -binding domain 166 223 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe05g1368 329 SUPERFAMILY WRKY DNA-binding domain 157 225 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe05g1368 329 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 97 231 IPR044810 GO:0003700(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1824 Hepe-Chr3:75216308 Hepe05g1368 Hepe-Chr5:62322167 6.47e-45 dispersed
Hepe04g1972 Hepe-Chr4:74567774 Hepe05g1368 Hepe-Chr5:62322167 5.26e-42 dispersed
Hepe05g1368 Hepe-Chr5:62322167 Hepe10g0586 Hepe-Chr10:7122456 4.12e-40 dispersed
Hepe03g0037 Hepe-Chr3:425163 Hepe05g1368 Hepe-Chr5:62322167 3.72e-52 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55637 PF03106 WRKY 3.40E-26 CL0274 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1368 - - - 0.0