Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe05g1368 | ATGGAGAAAAAATTTCAAGACTCGATAATGGGGTCTGAAAATTCTGCCGGATTTTACTCTCCGGCGACTAATTTTGGTTTTTCCGGTATGTTCGACATGCCATGTGATGATCATGATCATAAAGCTGCTTCTTGTTCTTCTAATTCCTCCTTTGACTTATTTGGTGCTGAAATTGAAATGGGAATCCATGATTTTTATAATAATCCTTCTTCTTCTTCTTCTTCTTTGTTCGATTTGCTTTCTACGGCGGCGCCGCCTCTTTCTTCCCCGGCTTCCACCGTCCCGGAGTCGTCGGAGGTTCTCAATGCCCCGGCGACGCCTAATTCCTCCTCGGTTTCTTCCTCCTCCAACGAAGCTGCAGCCATTGAAGAGGTTGACAAGAACAACAACATTGAGAAGGCTTCTTCTAAAGTGTTGAAGCCAAAAAAGAAGAGCCAGAAGAAGCAAAGAGAACCCAGATTTGCTTTCATGACAAAGAGTGATATTGATCATCTCGACGACGGCTACCGGTGGCGGAAGTACGGCCAAAAAGCCGTGAAGAACAGCCCTTATCCGAGAAGCTACTATCGTTGCACCACACCGGGGTGCGGTGTGAAGAAGAGGGTGGAGCGGTCGTCGGACGACCATTCGATCGTCGTAACGACGTACGAAGGCCAACACACCCACCAAAGTCCAGTAATGCCGCGAGGGAGTATCAGAATCCTTCCGGAATCCACGAACTGCGGCCTCATCCCCGATCACGCCGCCACCACCACAGGACTTTTATTCCAACAACACAACACTCCCCAGCTCTTCATGTATAGCCCTCCGCCGCCATTCGTAACAATCAACTCGTCGTCAGCAAGTCCTCGTCCTCCGTCTTCCTTCCCACCGCCACTGCCATCGTCATCGCCAACGCCGTTATCGTCTCAAGCTTCCCTGCTCCGAGACCATGGGCTTCTACAGGACTTGGTGCCATTACAAATGAGGAAGGAACCAAAAGATGATTAA | 990 | 49.6 | MEKKFQDSIMGSENSAGFYSPATNFGFSGMFDMPCDDHDHKAASCSSNSSFDLFGAEIEMGIHDFYNNPSSSSSSLFDLLSTAAPPLSSPASTVPESSEVLNAPATPNSSSVSSSSNEAAAIEEVDKNNNIEKASSKVLKPKKKSQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTPGCGVKKRVERSSDDHSIVVTTYEGQHTHQSPVMPRGSIRILPESTNCGLIPDHAATTTGLLFQQHNTPQLFMYSPPPPFVTINSSSASPRPPSSFPPPLPSSSPTPLSSQASLLRDHGLLQDLVPLQMRKEPKDD | 329 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 62322167 | 62323967 | - | Hsped.05g13680.1 | Hepe05g1368 | 570633 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe05g1368 | 329 | MobiDBLite | consensus disorder prediction | 87 | 151 | - | - | |
Hepe05g1368 | 329 | SMART | WRKY_cls | 165 | 224 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe05g1368 | 329 | MobiDBLite | consensus disorder prediction | 276 | 329 | - | - | |
Hepe05g1368 | 329 | FunFam | WRKY transcription factor 57 | 151 | 225 | - | - | |
Hepe05g1368 | 329 | MobiDBLite | consensus disorder prediction | 87 | 123 | - | - | |
Hepe05g1368 | 329 | Gene3D | WRKY domain | 149 | 226 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe05g1368 | 329 | ProSiteProfiles | WRKY domain profile. | 160 | 225 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe05g1368 | 329 | MobiDBLite | consensus disorder prediction | 284 | 298 | - | - | |
Hepe05g1368 | 329 | MobiDBLite | consensus disorder prediction | 125 | 139 | - | - | |
Hepe05g1368 | 329 | Pfam | WRKY DNA -binding domain | 166 | 223 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe05g1368 | 329 | SUPERFAMILY | WRKY DNA-binding domain | 157 | 225 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe05g1368 | 329 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 97 | 231 | IPR044810 | GO:0003700(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g1824 | Hepe-Chr3:75216308 | Hepe05g1368 | Hepe-Chr5:62322167 | 6.47e-45 | dispersed | |
Hepe04g1972 | Hepe-Chr4:74567774 | Hepe05g1368 | Hepe-Chr5:62322167 | 5.26e-42 | dispersed | |
Hepe05g1368 | Hepe-Chr5:62322167 | Hepe10g0586 | Hepe-Chr10:7122456 | 4.12e-40 | dispersed | |
Hepe03g0037 | Hepe-Chr3:425163 | Hepe05g1368 | Hepe-Chr5:62322167 | 3.72e-52 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55637 | PF03106 | WRKY | 3.40E-26 | CL0274 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe05g1368 | - | - | - | 0.0 |