Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1370 ATGGCGTCGTCTCTGATTCTGAATCCTGTAGCGAGTAATTCTGAGCGATCGCGTGATTCGTCCAGAAAGAAGAAGAAGAAGAAAGCGGCGAGGGAGGACGATCGTCAAGATCGGGAACATGATCACATCAAGTGGAAATCACAAGCGCAGCATCAAGTTTACTCATCGAAGCTGTTACGCGCGTTGAGTCAGGTCAGGATCAGTCCTCCTTCTTCTCCGTCGGCGGCGCCGCGCCGCGGCCGAGCTGTACGGGAGGCGGCCGATACAGTTCTGGCGATGACGGCGAAAGGGAGAAGTAGATGGAGCAGAGCAATCTTGACGAACCGTCTGAAGCTCAAGTTTCGAAAGCAGAATCGGCAGAAGGCGGCGGCGCGTGCGAGTGGAAACAGTCGAACGAAGAAACCGAGAGTTAGCGTTTTGCGGTTGAGAGGGAAGGGATTACCAACTGTACAGAGAAAAGTCCGGCTTCTCGGCCGGCTGGTACCCGGCTGCCGAAAACAACCGCTGCCGGTGATCCTCGATGAAGTACCTGATTACATAGCCGCACTGGAGATGCAGATTCGAGTCATGAGCGCCATAGCCAACTTGGTTTCAAGCTCTTCTTCTTCTTCTACTGGTATCGATTCTTCTATCTCTCCATCTTCTACCTGA 651 53.3 MASSLILNPVASNSERSRDSSRKKKKKKAAREDDRQDREHDHIKWKSQAQHQVYSSKLLRALSQVRISPPSSPSAAPRRGRAVREAADTVLAMTAKGRSRWSRAILTNRLKLKFRKQNRQKAAARASGNSRTKKPRVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVPDYIAALEMQIRVMSAIANLVSSSSSSSTGIDSSISPSST 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 62364224 62364874 - Hsped.05g13700.1 Hepe05g1370 570635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1370 216 MobiDBLite consensus disorder prediction 116 135 - -
Hepe05g1370 216 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 45 197 IPR044660 GO:0006355(InterPro)
Hepe05g1370 216 MobiDBLite consensus disorder prediction 1 50 - -
Hepe05g1370 216 CDD bHLH_AtIBH1_like 139 194 IPR044549 GO:0006355(InterPro)
Hepe05g1370 216 MobiDBLite consensus disorder prediction 1 15 - -
Hepe05g1370 216 MobiDBLite consensus disorder prediction 26 47 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1370 Hepe-Chr5:62364224 Hepe08g2247 Hepe-Chr8:62208133 1.08e-32 dispersed
Hepe03g0038 Hepe-Chr3:455090 Hepe05g1370 Hepe-Chr5:62364224 4.25e-75 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1370 - - - 0.0