Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1403 ATGGCCGTCGCCGATCTGCTCCTCCTTCTCATCTTCACTGCCATACCCTTTTCAATTTCTCAGCCAACTGGCCAAGCTCCACCTCCCACCACCTCCGCCGATTCCTGCAATGGGATCTTCTTATCCTACACTTTCATCAAAGGAACCAAGCTTCCCCCAAATCTCACTGACTTGACTCTTCAGCCTTACCGATTTGAATCCACTCTCTCGATTCTCAACAACGGCCTTCAGGAACTCAAGTCTTGGAGGGCTTTTGTGGGCTTTCGACACGATGAGTTCTTGGTCTCCGCTTCCGGCGCCGTCCTCGCCGATGGGACTTCCATCCCTGGTAACGTCGGTAATGGGACTCTCTTTGCTGGCTTTCCGATGACTGATTTGAAGACGGCGATTGAAACTGCTGGAGACTTAACTCAGATGCAGGTCCAAGTTCAATTGCTTGGGACCCAATTTGGAGTTGCCCCTCCCAATACTCCCATGCCTTCCAATATATCTCTTGCTAATGATGGATATCTCTGCCCTAAGCCGATTCTACGAGGAAAGAGTGAGATGCACGTATGTTGCACACCCGATCGAAGCGTTAAAACAAACATCACAACAAGTGAAGAGTTCTTGCCTCGCCAAAATGGCGATCTAACGATCATGTATGATGTGACAAGGACATATGATTCAAGTTATTGGGCACAAGTCAGAATCGCTAACCATAATCCTCTTGGTCGTCTTGACTATTGGAAATTGAGCTGGGATTGGATGGCGGATGAGTTCATCTTTTCAATGAAAGGGGCTTATCCTTCTGTTGTTGATTCTACTGATTGCATTTTTGGTAGACAAGGCACTTATTATAAGGATTTAGACTTTGCCAATGTATTAAGTTGTGAAAGAAGGCCAACGATTATTGATTTGCCTTCAACTAAGGCCAACGACACCACTCTCGGGTTGATCCCTTTCTGCTGTCGAAATGGGACTATCTTGCCGTCTCATATGGACTCGAGCAAGTCGATTTCAGCGTTTCAGATGCAAGTGTTTAAAATGCCACCAGATCTCAACAGATCCCAGATTACACCACCTCAGAATTGGCAGATTAGTGGCATTCTCAACCCCACTTATAAATGTGGCCCTCCAGCAAGGGTAAGTCCTAGCGAGTTCCCTGACTCGAGCGGTTTACCGTTGAATTCGACTGCAGTGGCTAGCTGGCAGGTTGTTTGTAATATAACACACGTCAAGGATGACACACCAAAGTGTTGTGTTTCGTTTTCGGCTTTCTACAACGAATCTGTCATCCCGTGCAGAACGTGTGCTTGTGGATGCTCGCAGAACTCTGCCCGTACATGTAATGCAACCTCCCCTGCAATGCTCCTCCCACCTGAAGCCCTTCTTGTTCCTTTTGAGAATAGGACTGCCATGGCTGTTGCTTGGGCTGGTATTAAACATTACCCAGTTCCTAACCCGATGCCTTGTGCGGATAACTGCGGTGTCAGTATCAATTGGCACGTGTTTACTGATTATAGAGACGGATGGAGTGCGAGGATCACTCTCTTCAACTGGGGCGAAGTGAATTTTGCAGATTGGTTTGCTGCAGTTCAGATGAACAAAGCAGCACCCGGTTTCCAGGCAATGTACTCGTTCAACGCATCCACCTTGGAATTGGATGGTTCCAATAATACTATCTTTATGCAGGGTAATCCTGGACTGAACTATCTCGTGCCTGAAACAGATGCAATCAACCCAGCGAAGGATCCGAGAATACCTGGAAAACAGCAATCTGTGATCTCATTTACAAAGAAGAACATACAAGTTCTTAACATGGCTGCTGGAGATGGGTTCCCCACAAAAGTGTTTTTCAATGGGGAAGAATGCTTAATTCCAAAAATATTCCCAATCAACGACAGCCGAAGGAACTTAGCTTCGTTCATTCCGAGCATCCTAGTGCTACTACTCGTGTTCGTGTTCATTCAGCAATAG 1959 46.61 MAVADLLLLLIFTAIPFSISQPTGQAPPPTTSADSCNGIFLSYTFIKGTKLPPNLTDLTLQPYRFESTLSILNNGLQELKSWRAFVGFRHDEFLVSASGAVLADGTSIPGNVGNGTLFAGFPMTDLKTAIETAGDLTQMQVQVQLLGTQFGVAPPNTPMPSNISLANDGYLCPKPILRGKSEMHVCCTPDRSVKTNITTSEEFLPRQNGDLTIMYDVTRTYDSSYWAQVRIANHNPLGRLDYWKLSWDWMADEFIFSMKGAYPSVVDSTDCIFGRQGTYYKDLDFANVLSCERRPTIIDLPSTKANDTTLGLIPFCCRNGTILPSHMDSSKSISAFQMQVFKMPPDLNRSQITPPQNWQISGILNPTYKCGPPARVSPSEFPDSSGLPLNSTAVASWQVVCNITHVKDDTPKCCVSFSAFYNESVIPCRTCACGCSQNSARTCNATSPAMLLPPEALLVPFENRTAMAVAWAGIKHYPVPNPMPCADNCGVSINWHVFTDYRDGWSARITLFNWGEVNFADWFAAVQMNKAAPGFQAMYSFNASTLELDGSNNTIFMQGNPGLNYLVPETDAINPAKDPRIPGKQQSVISFTKKNIQVLNMAAGDGFPTKVFFNGEECLIPKIFPINDSRRNLASFIPSILVLLLVFVFIQQ 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 62902835 62905242 + Hsped.05g14030.1 Hepe05g1403 570668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1403 652 PANTHER COBRA-LIKE PROTEIN 7 15 649 - -
Hepe05g1403 652 Pfam COBRA-like protein 225 404 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1403 Hepe-Chr5:62902835 Hepe07g1196 Hepe-Chr7:28357473 1.89e-270 dispersed
Hepe05g1403 Hepe-Chr5:62902835 Hepe07g2448 Hepe-Chr7:68827158 1.03e-39 transposed
Hepe05g1403 Hepe-Chr5:62902835 Hepe09g0285 Hepe-Chr9:2448414 1.92e-39 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1403 - - - 0.0