Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe05g1404 | ATGTCTACGGCCAGTTCGAGCTCTGTAAGGAAACCCGTTGAAGCTGTTCCCGACCAGTTTCCAGCCGGGCTTCGTGTTCTAGTTGTGGATGATGATCCGACTTGCCTTATGATCTTGGAGAGGATGCTTCGTATTTGCCGCTATGAAGTTACGAAATGTAGTCGAGCTGAGGATGCGCTGTCTCTTCTCAGACGTTACAAGAACGGGTTCGATATCGTTTTGAGTGATGTTCACATGCCAGACATGGATGGGTTCAAACTTCTGGAATACATTGGATTGGAAATGGACTTGCCTGTAATAATGATGTCGGTGGATGATGGGAAAAACGTCGTCATGAAGGGAGTGACTCATGGTGCTTGTGACTATTTGATAAAACCTGTTCGAATTGAAGCGCTGAAGAACATATGGCAACATGTTGTTCGCAAGCGGAAGAATGAATGGAAGGACATAGAGCAATCTGGATGTGCGGATGATGTAGATCGGCAGCAAAAAACTAATGAAGATGCGGATTATTCGTCATCTGCTAATGAAGGAAGTTGGAGGAACTCAAAGAGGAGGAAGGATGACGTAGACGATGCCGAGGAGAGAGATGATTCATCGACCCTTAAGAAACCAAGGGTCGTTTGGTCCGTTGAGCTCCATCAACAGTTTGTCGCTGCTGTTAATCAACTAGGAATTGATAAAGCTGTTCCCAAGAAGATTCTGGAGTTGATGAATGTTCCAGGACTCACTAGAGAAAATGTTGCCAGCCACCTTCAGAAATATCGCTTGTACCTGAGAAGACTAAGTGGAATCACACAACACCAGAGTAATTTAAATAACACATTCATGAGTGCCCAAGATGCATTTGGCTCGTCACTGAACGGGCTTGATCTTCAAACTCTCGCTGCTGCCGGTCAACTCCAGCCACAGAGCCTTGCTACACTCCAAGCAGCTGGATTTGGTAGGTCTACAGCGAAACCGGGCATGCCTATGCCCCTTGTTGATCAAAGGAACCACATTTTTAGCTTTGAAAATCCAAAGTTGAGATTTGGTGATGGACAACAGCCACATTTGAACGGTAGTAAACCAATGAATCTACTTCACGGAATTCCAACAACGATGGAGCCGAAACAACTTGCTAATCTGCAGCATTCTGCACAATCTCATGGGAACATGACAATGCAAGTTAGTGCCCAAGGAGGCCAAACTAGCTCTCAACTAATGCAGACACCTCAACCACAAGCTAGAGCACAGATCCTAAATGAAAGTACCTCAACTAGCGTAACAAGGCTTCCACAGACAATACAGCAGTCGATTTTGCCAAATGGAACCGGTGCAGTTTTGGCTAGGCACGAATTTGCCAATAACAGCAGAGGTGGAGGGTACAATCTAGTTTCACCACCCTCAACAATGTTAAATTTCCCCTTGAACCAAACTGCAGAATTGCCTGGTAACAGTTTTCCTCTTCAAAGTACCCCAGGATTGTCAAGTATTGTACCGAAGGGAAGATTCCCAGACGAGGTTAACTCGGACATTAAAGGATCTGAAGGTTTTGTGCCAAGCTATGATATGTTTAGGGATATGCATTCTCAGAAGCCCCATGATTGGGACTTGCAACATGTAGGCGTGACCTTCGATGCATCTCAAAGTAGTCACGACATTCCATCCTCAGCTTTTGCTCATCAAGGGTATGCCTCTAGCCAACAAAATGGACAAAACAGGAACACATCTATAGCAGCCAAGGCCATGTTCTTGTTGGAAGAAGGAAGTGACAATGGGAATGCACACAGTATGGGTCAACAACTCAACCCTCTTTTCCTTGACGGTTCGGTGAGAGTTAAAGCTGAAAGAGCTTCTGATACTAGCAGTCAAACTGACCTTTACTCTGAACACTTTGGTCAGGAGGACCTAATGAGTGCACTTCTTAAGCAGCAACAGGGAAGCCTTGCAACAGCTGAAAGTGAGTTGGAATGGGTATTTCATCACAATACTCCTGTTTAG | 1983 | 45.18 | MSTASSSSVRKPVEAVPDQFPAGLRVLVVDDDPTCLMILERMLRICRYEVTKCSRAEDALSLLRRYKNGFDIVLSDVHMPDMDGFKLLEYIGLEMDLPVIMMSVDDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDIEQSGCADDVDRQQKTNEDADYSSSANEGSWRNSKRRKDDVDDAEERDDSSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGITQHQSNLNNTFMSAQDAFGSSLNGLDLQTLAAAGQLQPQSLATLQAAGFGRSTAKPGMPMPLVDQRNHIFSFENPKLRFGDGQQPHLNGSKPMNLLHGIPTTMEPKQLANLQHSAQSHGNMTMQVSAQGGQTSSQLMQTPQPQARAQILNESTSTSVTRLPQTIQQSILPNGTGAVLARHEFANNSRGGGYNLVSPPSTMLNFPLNQTAELPGNSFPLQSTPGLSSIVPKGRFPDEVNSDIKGSEGFVPSYDMFRDMHSQKPHDWDLQHVGVTFDASQSSHDIPSSAFAHQGYASSQQNGQNRNTSIAAKAMFLLEEGSDNGNAHSMGQQLNPLFLDGSVRVKAERASDTSSQTDLYSEHFGQEDLMSALLKQQQGSLATAESELEWVFHHNTPV | 660 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 62906870 | 62911133 | - | Hsped.05g14040.1 | Hepe05g1404 | 570669 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe05g1404 | 660 | SMART | REC_2 | 24 | 136 | IPR001789 | GO:0000160(InterPro) | |
Hepe05g1404 | 660 | CDD | REC_typeB_ARR-like | 26 | 140 | - | - | |
Hepe05g1404 | 660 | MobiDBLite | consensus disorder prediction | 180 | 201 | - | - | |
Hepe05g1404 | 660 | SUPERFAMILY | CheY-like | 23 | 146 | IPR011006 | - | |
Hepe05g1404 | 660 | ProSiteProfiles | Response regulatory domain profile. | 25 | 140 | IPR001789 | GO:0000160(InterPro) | |
Hepe05g1404 | 660 | MobiDBLite | consensus disorder prediction | 154 | 201 | - | - | |
Hepe05g1404 | 660 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 22 | 339 | IPR045279 | GO:0009736(InterPro) | |
Hepe05g1404 | 660 | FunFam | Two-component response regulator | 200 | 263 | - | - | |
Hepe05g1404 | 660 | FunFam | Two-component response regulator | 24 | 161 | - | - | |
Hepe05g1404 | 660 | PIRSF | RR_ARR_type-B | 1 | 650 | IPR017053 | GO:0003677(InterPro)|GO:0003700(InterPro)|GO:0009736(InterPro) | |
Hepe05g1404 | 660 | Pfam | Response regulator receiver domain | 26 | 134 | IPR001789 | GO:0000160(InterPro) | |
Hepe05g1404 | 660 | Gene3D | - | 24 | 157 | - | - | |
Hepe05g1404 | 660 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 204 | 257 | IPR006447 | GO:0003677(InterPro) | |
Hepe05g1404 | 660 | SUPERFAMILY | Homeodomain-like | 201 | 261 | IPR009057 | - | |
Hepe05g1404 | 660 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 203 | 260 | IPR017930 | - | |
Hepe05g1404 | 660 | Gene3D | - | 201 | 263 | - | - | |
Hepe05g1404 | 660 | Pfam | Myb-like DNA-binding domain | 206 | 256 | IPR001005 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g0489 | Hepe-Chr3:7604627 | Hepe05g1404 | Hepe-Chr5:62906870 | 6.20e-20 | dispersed | |
Hepe05g1404 | Hepe-Chr5:62906870 | Hepe09g0595 | Hepe-Chr9:5591848 | 7.61e-83 | dispersed | |
Hepe10g0068 | Hepe-Chr10:662676 | Hepe05g1404 | Hepe-Chr5:62906870 | 1.13e-91 | transposed | |
Hepe03g0069 | Hepe-Chr3:842176 | Hepe05g1404 | Hepe-Chr5:62906870 | 2.00e-198 | wgd | |
Hepe03g1866 | Hepe-Chr3:75645452 | Hepe05g1404 | Hepe-Chr5:62906870 | 8.19e-21 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55641 | PF00072 | Response_reg | 1.70E-22 | CL0304 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe05g1404 | K14491 | - | csv:101209013 | 1206.05 |