Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1442 ATGGCGGAGCAGGTGATGGTGATTGGCGTCGATGAGAGTGAGCACAGCTTCTACGCCTTGAAGTGGATTCTCCAACGTTTCTTTTGCCCTAACGCTACTCCTTACAAGCTTGTTATTGTACACGCTAAACCAACTCCCTCTAGCGTTCTTGGAATCGTCGGCCCAGGAGCTGTGAATGTCGTCTTGCCCATACTAGATGCAGATTTGAAGAAAATAGCTTACAGGACTCTCCAAAAAGCGAAGGATATATGCATCGAACACAAGGTCAAAAACGTGCAGGCTGAAATTGTGGAGGGTGATGCCAGAAATGTAATCTGCGATGCTGTAGAAAAATACCATGCATCCATTTTGGTTGTTGGAAGTCATAATTATGGAGTAATAAAAAGGATAGTTCTGGGAAGTGTAAGTGACTACTGTGCTCACCATGCCCATTGCTCTGTCATGATTGTGAAGAGGCCACCCAAGCCCAAGAACTGA 477 45.49 MAEQVMVIGVDESEHSFYALKWILQRFFCPNATPYKLVIVHAKPTPSSVLGIVGPGAVNVVLPILDADLKKIAYRTLQKAKDICIEHKVKNVQAEIVEGDARNVICDAVEKYHASILVVGSHNYGVIKRIVLGSVSDYCAHHAHCSVMIVKRPPKPKN 158
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 63704727 63707370 - Hsped.05g14420.1 Hepe05g1442 570707

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1442 158 CDD USP_Like 6 150 - -
Hepe05g1442 158 Pfam Universal stress protein family 6 151 IPR006016 -
Hepe05g1442 158 Gene3D HUPs 1 158 IPR014729 -
Hepe05g1442 158 PRINTS Universal stress protein signature 3 21 IPR006015 -
Hepe05g1442 158 PRINTS Universal stress protein signature 129 151 IPR006015 -
Hepe05g1442 158 PRINTS Universal stress protein signature 111 123 IPR006015 -
Hepe05g1442 158 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 7 156 - -
Hepe05g1442 158 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 3 155 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1442 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1893 Hepe-Chr3:75996674 Hepe05g1442 Hepe-Chr5:63704727 4.16e-51 dispersed
Hepe03g1894 Hepe-Chr3:76000051 Hepe05g1442 Hepe-Chr5:63704727 1.72e-48 dispersed
Hepe01g1180 Hepe-Chr1:76950323 Hepe05g1442 Hepe-Chr5:63704727 4.56e-25 transposed
Hepe02g1142 Hepe-Chr2:14178094 Hepe05g1442 Hepe-Chr5:63704727 1.49e-29 transposed
Hepe02g3096 Hepe-Chr2:80116437 Hepe05g1442 Hepe-Chr5:63704727 1.68e-11 transposed
Hepe05g0133 Hepe-Chr5:1530743 Hepe05g1442 Hepe-Chr5:63704727 2.39e-10 transposed
Hepe05g1388 Hepe-Chr5:62639720 Hepe05g1442 Hepe-Chr5:63704727 9.08e-11 transposed
Hepe10g0418 Hepe-Chr10:4655756 Hepe05g1442 Hepe-Chr5:63704727 1.14e-27 transposed
Hepe03g1892 Hepe-Chr3:75993158 Hepe05g1442 Hepe-Chr5:63704727 1.60e-36 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g294 . . . . . Bpe14g01127 . . . . Cma06g01503 . Car06g01294 . . Cpe08g00181 . Bhi01g01022 Tan10g1014 Cmetu06g1461 . Hepe05g1442 . . . . . . . . . . . . . . . . Cme06g00737 Blo02g00504 . . . . . . Bma06g01498 . Cmo06g01501 . . . . . . . . . . . . . . Cla05g00657 Cam05g0719 Cec05g0729 Cco05g0728 Clacu05g0713 Cmu05g0678 Cre05g0752 . Csa03g01472 Chy06g00709 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000594 1 7 3 4 3 2 4 2 2 4 3 2 5 5 4 5 2 4 4 2 4 4 4 3 3 4 4 2 5 3 104