Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1451 ATGCTTCAAGAAGCTTCAACAAAACCTGAGGGAGAACTTGAAGTTAGCTTTGGTTATAAATGCAATAGTAACATAGATGGAATTCATGAGTTTTCTGACAAGTTCGAGATCCAGCCTGGACTTCAAAGGATCAGCAGTTTCTCTTGCTTATCTGGGGCTGCCTTGAGCGCAAATGCCACCCTAGCAAACACAAATATATGCAATGGGTTGATAGGAGAAGAAATACTTCCGTCCTGGGACTCTCCTAACTCCTTCCGTAAGGTTCCCTCATCACCCACTCTTTCAAGGTTGGATATGTTGTCAACGTCTCTGCAGAGTAGTCTGTCAAACTTAAGTTGCAGTCCATCTACCCCAACATCTGAATATGATTCATACTTGTTGAAATCCATGAGTGCTCCTTCCGGAAGTGAAGGTTTTCTTAATGTTAAGGAAGTGCAAGTGGCAGGTGGAGCTGCTGGTGAGGACAGGGTCCAAGCTGTGTGTTCTGAAGAAAATGGATGGCTATTTTGTGCAATTTATGATGGTTTTAATGGAAGAGATGCAGCTGATTTTCTTGCTGGCACATTGTATGAAACCATTGTATTTTATTTTAATCTACTAGATTGGGAAGCTAAGAATGAAACCTTCGATGGTTCGGAAATTGATAATTCACGTCTTCTTGAAGATAGTAGCGTTACTCAGGGAAGATTTTCTCCGTTGAGAAAAAATAGTAAATTTGGTTCAGATATCAACAATATATTCGAGAACAACCATTCACATGCCCAAGCAGGAATGGACAACTATTCTCTAAGGCATGGGGTGCTTGATAGCCTCCAGCGTGCTCTTAGTCAAACAGAGAATGATTTTCTGCACATGGTTGAACAAGAAATGGAGGATCGTCCTGATTTAGTTTCTGTTGGATCTTGTGTTTTGGTTGTTCTTCTTCATGGAAAGGATTTGTATACGCTAAATTTGGGCGATAGTAGAGCAGTACTAGCTACCCTTGATGAAGGTGCTATGAGAGGGAATGTGGGACTGAAAGCTATCCAGCTCACTGAGAGTCACACTGTGGACAATGAACTTGAAAGAGCACAGTTACAACATGATCATCCTGATGATCCCACAATCGTTGTTGCTGGGAAAGTCAAAGGAAAACTGAAGGTCACTCGTGCTTTTGGAGTTGGCTACCTGAAGACGGAAAAGTTTAATGATGCTTTGATGGGTATTCTTCGAGTTCGTAACCTAATAAGCCCTCCCTATATTTCCACTCAACCGGCATTGTCTGTCCATAGGATATCAAAGTCAGATTGCTTTGTTATAGTTGGCAGTGATGGTTTATTTGACTTTTTTGGCAATGACGAGGCAGTGAACCTTGTCCATTCATATATCTTGAGCAACCCAACGGGTGATCCTGCAAAATTTCTACTGGAGCAGCTCTTATTGAAAGCAGCTGATTGCGCAGGTTTTAGCAAAGAAGAATTAATTACCATTCCAGCCGGCAGGAGAAGGAAATATCATGATGATGTAACTGTTATTGTAATTATCCTTGGAACAAATCAGCGCACCACAAGGGCTTCTACTAGCATCACTTCAAATCATCATCACTTGCCCTTGATTTGA 1599 41.53 MLQEASTKPEGELEVSFGYKCNSNIDGIHEFSDKFEIQPGLQRISSFSCLSGAALSANATLANTNICNGLIGEEILPSWDSPNSFRKVPSSPTLSRLDMLSTSLQSSLSNLSCSPSTPTSEYDSYLLKSMSAPSGSEGFLNVKEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYETIVFYFNLLDWEAKNETFDGSEIDNSRLLEDSSVTQGRFSPLRKNSKFGSDINNIFENNHSHAQAGMDNYSLRHGVLDSLQRALSQTENDFLHMVEQEMEDRPDLVSVGSCVLVVLLHGKDLYTLNLGDSRAVLATLDEGAMRGNVGLKAIQLTESHTVDNELERAQLQHDHPDDPTIVVAGKVKGKLKVTRAFGVGYLKTEKFNDALMGILRVRNLISPPYISTQPALSVHRISKSDCFVIVGSDGLFDFFGNDEAVNLVHSYILSNPTGDPAKFLLEQLLLKAADCAGFSKEELITIPAGRRRKYHDDVTVIVIILGTNQRTTRASTSITSNHHHLPLI 532
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 63830089 63838983 + Hsped.05g14510.1 Hepe05g1451 570716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1451 532 PANTHER PROTEIN PHOSPHATASE 2C 148 507 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Hepe05g1451 532 Gene3D - 119 518 IPR036457 -
Hepe05g1451 532 CDD PP2Cc 152 509 IPR001932 -
Hepe05g1451 532 Pfam Protein phosphatase 2C 259 460 IPR001932 -
Hepe05g1451 532 SUPERFAMILY PP2C-like 153 510 IPR036457 -
Hepe05g1451 532 ProSiteProfiles PPM-type phosphatase domain profile. 139 509 IPR001932 -
Hepe05g1451 532 SMART PP2C_4 130 507 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1451 Hepe-Chr5:63830089 Hepe08g0790 Hepe-Chr8:7084474 3.88e-59 dispersed
Hepe05g1451 Hepe-Chr5:63830089 Hepe04g0852 Hepe-Chr4:62793736 1.24e-69 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1451 - - - 0.0