Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1468 ATGGCGGCCATTTCAATCTGCTTTGCTCCACAAGCTCTTGCACGACCAAGAATTGGAAACCCTAGAAAGATACAGTCGCCCAAGAAGCTTCGTGGGAACAACAAGCTCGATCGCAGCAGTAGCGTCAAGATCAGCACCACCAATTCGAAGGAGTTATCTTCCTTTGGCGTTGAAGCCACCACCTACACTCGCCTCCCTCCCAGGGAAGACTTTGCTCTTCTTACCTTTGATTCTCCGAAGAAGGATTCTTCTGTGGTGAAGCTTTTGGATTCGGATGTTGCGATAATTGAGGAGAAAGAGGATTTGGATTCTTTGAACTGCGAGGAGCGGGAGGAAGAAGGAGAAGAAGGAGGATTGGATGGTAATTTGGGGTTTGGGAATGGTTATGGGAAGTTTGAAGTGTTTGAGGGGGAATATGATTCTGAAATGGAGGAGTTTAGTGATAGTGATGTGGAAGAGGGAGAGGAAGATGAGGAAGGAGAGAAGGTTTTGGCATTTAGGAAGGGGAGATTTGTTAATACTGATGATGATGCTTACGACGCTGGCGAAGAAGCGGGCTCTTTGCTTGACGGTGAAGATGTAAAGGAGAAGGGGTTACCAGCAGTAATGCGGTGTTTTGATCGAGCAAAAATTTATGTTAAAGCTGGAGATGGTGGAAATGGCGTTGTGGCGTTTCGGCGTGAGAAGTATGTGCCGTTTGGTGGTCCATCAGGCGGAGATGGAGGGAGAGGTGGGAATGTGTATGTTGAAGTTGATGGGTCGATGAATTCGCTATTGCCATTTCGAAACGGTATACATTTTCGTGCAGGAAGGGGTAGTCATGGGAAGGGGAGAATGCAAAGCGGGGCAAAGGGTGAGGAAGTGGTGGTGAAAGTGGCACCTGGAACACTGATCAGAGACTCATTGAGTCAAGAGGTTCTGTTGGAATTATTGCATCCAGGGCAGCGAGCTCTGTTGCTGCGCGGTGGAAGAGGTGGAAGAGGCAATGCATCTTTCAAGTCCGGGACAAATAAGGTTCCAAAGATTTCAGAAAATGGAGAAGAGGGTTCAGAAATGTGGTTGGAGTTGGAGCTAAAGCTTGTTGCAGACGTTGGAATCGTGGGGGCACCAAATGCAGGGAAAAGCACACTTTTGAGCGTGATAAGTGCTGCACAGCCAGCCATAGCAAATTACCCTTTTACCACTCTACTCCCAAACTTAGGTGTAGTTTCGTTTGACTATGATTCAACTATGGTGGTAGCAGATCTTCCAGGATTACTTGAAGGGGCACATGAGGGCTTTGGTTTAGGCCATGAATTTCTACGTCACACCGAAAGGTGTTCTGCGCTGGTGCATGTGGTTGATGGATCAGGACCACAAGCTGAATATGAATTTGATGCTGTTCGTTTGGAGTTGGAGCTCTTTAGCCCTGAACTATCTGAAAAGCCCTATCTTGTTGCCTATAATAAAATGGATCTTCCTGAAGCGTACGAAAACTGGCCAGCGTTCAAGGAAAAGCTACAAGCTCGTGGGATTGAACCTTTTTGCATGAGTGCAGTAAAAAGCGAGGGCACTCATGAAGTCATTAGTGCTGCATATCAGCTGCTAAGGGAAAATAAAGAAGCTTCCAGGGAATTTCAAGGTGGGAAAATACCAGAGAATCTTGACCATGTGGCAGATAAAATACACAAGCAACGTAGTGCTTCTATTGATGACTTTGAAATTATTCATGATAGCGGTTCCAATATATGGCATGTAGTAGGATCTGGTTTGCAACGCTTTGTTCAGATGACAAATTGGCGTTACATGGAGTCTGACAGAAGGTTCCAACATGTCATGGATGCTTGTGGTGTCAACAAGTCACTCAAAAAACTTGGCGTCAAGGAGGGTGACACAGTATTTATTGCAGAGATGGAGATGATCTGGCATGATTCAGCCAATGCTTCTGGTCCATCTAATCTGAAGAAAAGATCGGATTCGGTCAAATGGCCCGAGTGGAAGTAA 1983 46.09 MAAISICFAPQALARPRIGNPRKIQSPKKLRGNNKLDRSSSVKISTTNSKELSSFGVEATTYTRLPPREDFALLTFDSPKKDSSVVKLLDSDVAIIEEKEDLDSLNCEEREEEGEEGGLDGNLGFGNGYGKFEVFEGEYDSEMEEFSDSDVEEGEEDEEGEKVLAFRKGRFVNTDDDAYDAGEEAGSLLDGEDVKEKGLPAVMRCFDRAKIYVKAGDGGNGVVAFRREKYVPFGGPSGGDGGRGGNVYVEVDGSMNSLLPFRNGIHFRAGRGSHGKGRMQSGAKGEEVVVKVAPGTLIRDSLSQEVLLELLHPGQRALLLRGGRGGRGNASFKSGTNKVPKISENGEEGSEMWLELELKLVADVGIVGAPNAGKSTLLSVISAAQPAIANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGAHEGFGLGHEFLRHTERCSALVHVVDGSGPQAEYEFDAVRLELELFSPELSEKPYLVAYNKMDLPEAYENWPAFKEKLQARGIEPFCMSAVKSEGTHEVISAAYQLLRENKEASREFQGGKIPENLDHVADKIHKQRSASIDDFEIIHDSGSNIWHVVGSGLQRFVQMTNWRYMESDRRFQHVMDACGVNKSLKKLGVKEGDTVFIAEMEMIWHDSANASGPSNLKKRSDSVKWPEWK 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 64090222 64096941 - Hsped.05g14680.1 Hepe05g1468 570733

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1468 660 FunFam GTPase Obg 203 360 - -
Hepe05g1468 660 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 353 533 IPR027417 -
Hepe05g1468 660 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 362 530 IPR031167 GO:0005525(InterPro)
Hepe05g1468 660 Coils Coil 95 115 - -
Hepe05g1468 660 Gene3D GTP1/OBG domain 201 360 IPR036726 -
Hepe05g1468 660 CDD Obg 362 529 IPR031167 GO:0005525(InterPro)
Hepe05g1468 660 NCBIfam Obg family GTPase CgtA 206 529 IPR014100 GO:0000287(InterPro)|GO:0003924(InterPro)|GO:0005525(InterPro)
Hepe05g1468 660 FunFam GTPase Obg 361 540 - -
Hepe05g1468 660 MobiDBLite consensus disorder prediction 18 45 - -
Hepe05g1468 660 ProSitePatterns GTP1/OBG family signature. 415 428 IPR006074 GO:0005525(InterPro)
Hepe05g1468 660 SUPERFAMILY Obg GTP-binding protein N-terminal domain 206 360 IPR036726 -
Hepe05g1468 660 Gene3D - 567 638 IPR036346 -
Hepe05g1468 660 Pfam Domain of unknown function (DUF1967) 566 635 IPR015349 GO:0000166(InterPro)
Hepe05g1468 660 Hamap GTPase Obg [obg]. 204 530 IPR014100 GO:0000287(InterPro)|GO:0003924(InterPro)|GO:0005525(InterPro)
Hepe05g1468 660 ProSiteProfiles Obg C-terminal (OCT) domain profile. 558 637 IPR015349 GO:0000166(InterPro)
Hepe05g1468 660 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 166 537 IPR045086 GO:0003924(PANTHER)|GO:0003924(InterPro)|GO:0005525(InterPro)|GO:0005525(PANTHER)|GO:0005739(PANTHER)
Hepe05g1468 660 MobiDBLite consensus disorder prediction 640 660 - -
Hepe05g1468 660 Pfam 50S ribosome-binding GTPase 363 483 IPR006073 GO:0005525(InterPro)
Hepe05g1468 660 Pfam GTP1/OBG 207 360 IPR006169 -
Hepe05g1468 660 PRINTS GTP1/OBG GTP-binding protein family signature 413 428 IPR006073 GO:0005525(InterPro)
Hepe05g1468 660 PRINTS GTP1/OBG GTP-binding protein family signature 364 384 IPR006073 GO:0005525(InterPro)
Hepe05g1468 660 PRINTS GTP1/OBG GTP-binding protein family signature 385 403 IPR006073 GO:0005525(InterPro)
Hepe05g1468 660 PRINTS GTP1/OBG GTP-binding protein family signature 430 448 IPR006073 GO:0005525(InterPro)
Hepe05g1468 660 NCBIfam Obg family GTPase CgtA C-terminal domain 567 635 IPR015349 GO:0000166(InterPro)
Hepe05g1468 660 Gene3D - 361 540 IPR027417 -
Hepe05g1468 660 SUPERFAMILY Obg GTP-binding protein C-terminal domain 565 637 IPR036346 -
Hepe05g1468 660 ProSiteProfiles Obg domain profile. 203 361 IPR006169 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1468 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1649 Hepe-Chr1:81705436 Hepe05g1468 Hepe-Chr5:64090222 1.21e-58 dispersed
Hepe05g1468 Hepe-Chr5:64090222 Hepe10g1229 Hepe-Chr10:47496521 1.26e-38 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g339 . . . . . Bpe14g01139 . . . . Cma06g01481 . Car06g01274 . Sed02g1212 Cpe08g00202 . Bhi01g00970 Tan10g0975 Cmetu10g1427 . Hepe05g1468 . Lcy11g1435 . . . . . . . . . Cone7ag0164 Cone4ag0160 Lsi05g01519 . . Cme06g00707 Blo02g00518 . . Bda13g00170 . . . . . Cmo06g01477 . . . . . . . . . . . . . . Cla05g00630 Cam05g0690 Cec05g0699 Cco05g0696 Clacu05g0684 Cmu05g0652 Cre05g0723 . Csa03g01431 Chy06g00671 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009907 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 2 2 1 33