Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe05g1473 | ATGGGTGGGTGTTTTCCTTGTTTTGGATCCTCTGATGAAGACGGTAATGGCGTCAAGGAAGCTACTAAGAAGGATTCAGCTAAGGATGGCTCCACTGCTCAGTCTCACCATGTTAGCAGAGTGAACTCAGATAAATCGAAGTCGCGGAGTGTATCTGATGCTAAGAAGGAACCGACTGTTCAAAAGGATGGAACAACAGCACATATTGCAGCCCAAACATTTACATTTCGGGAGCTCGCTACTGCTACGAAGAACTTTAGACCAGAATGCTTGCTGGGAGAAGGGGGCTTTGGAAGGGTTTACAAAGGTCGCTTGGAGAGCACAGGACAGGTAGTGGCTGTGAAGCAGCTTGACCGTAATGGTCTTCAAGGAAACCGGGAATTTTTGGTGGAGGTTCTAATGCTTAGCCTGTTACATCACCCAAATCTTGTTAACTTGATAGGCTATTGTGCTGATGGGGATCAACGTCTTCTTGTTTATGAATTCATGCCATTGGGGTCGTTGGAAGATCATTTGCACGATTTTCCACCAGATAAGGAGCCCTTGGATTGGAATACTAGAATGAAGATTGCAGCTGGTGCTGCAAAAGGATTGGAATATTTGCATGACAAAGCAAACCCCCCTGTTATATATCGAGACTTGAAGTCGTCTAATATTCTTCTTGACGAGGGCTACCACCCCAAGCTGTCAGATTTCGGTCTTGCAAAACTGGGTCCAGTCGGTGATAAGACTCATGTCTCTACGAGAGTGATGGGAACATACGGTTATTGTGCTCCAGAGTATGCTATGACTGGTCAACTCACTCTCAAATCAGATGTATATAGTTTTGGAGTTGTCTTTCTAGAACTTATCACAGGGCGGAAGGCGATCGATAATACCAGAGGTCCGGGAGAGCATAATCTTGTAGCATGGGCTCGGCCGCTTTTTAAAGATCGCCGCAAGTTCCCTAAGATGGCCGATCCACTGCTGCAAGGCCGTTATCCCATGCGAGGACTTTATCAGGCATTGGCAGTTGCAGCAATGTGCTTGCAGGAACAGGCTGCTACAAGACCTCTAATCGGGGACGTGGTTACTGCTTTGACGTATTTAGCTTCCCAAACTTATGATCCTAATGCAGCTGCTTCTCAAAGCAATCGTATGGGTGGATCTACTCCACGATCCCGAGATGAGCGGAGAGGTTTACCAGATGGACTGGATAGCCCTGATGAGCGTGGCCGCGGACGCGGTTCCCCATCGAACTACAGAAACTCACCTGATTACCGAAAGAGAGACCTCCATAGGGAATTGAGTTGTGGAGGTACAGAGCTGAGCAAAATCGACACTGGAGGCGGGTCCGGTCGAAAGTGGGGTTTGGATGAGTTAGAACGACAAGATTCTCAGCGAGACAGTCCTGTATATACTGGGAGAGCAAGGGAAACACCGAGGAACCGCGACCTAAACAGAGAACGTGCAGTCGCAGAAGCAAAAGTGTGGGGTGAAAACTGGAGAGAGAGAAAGCGGGCGAATGCGCAAGGCAGCTTCGACGGTTCACAAGAATGA | 1539 | 48.21 | MGGCFPCFGSSDEDGNGVKEATKKDSAKDGSTAQSHHVSRVNSDKSKSRSVSDAKKEPTVQKDGTTAHIAAQTFTFRELATATKNFRPECLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDFPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRGPGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNAAASQSNRMGGSTPRSRDERRGLPDGLDSPDERGRGRGSPSNYRNSPDYRKRDLHRELSCGGTELSKIDTGGGSGRKWGLDELERQDSQRDSPVYTGRARETPRNRDLNRERAVAEAKVWGENWRERKRANAQGSFDGSQE | 512 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 64166351 | 64171022 | + | Hsped.05g14730.1 | Hepe05g1473 | 570738 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe05g1473 | 512 | MobiDBLite | consensus disorder prediction | 417 | 433 | - | - | |
Hepe05g1473 | 512 | MobiDBLite | consensus disorder prediction | 372 | 481 | - | - | |
Hepe05g1473 | 512 | Gene3D | Phosphorylase Kinase; domain 1 | 56 | 162 | - | - | |
Hepe05g1473 | 512 | MobiDBLite | consensus disorder prediction | 1 | 64 | - | - | |
Hepe05g1473 | 512 | MobiDBLite | consensus disorder prediction | 40 | 62 | - | - | |
Hepe05g1473 | 512 | ProSiteProfiles | Protein kinase domain profile. | 86 | 363 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe05g1473 | 512 | MobiDBLite | consensus disorder prediction | 384 | 409 | - | - | |
Hepe05g1473 | 512 | PANTHER | OS07G0668900 PROTEIN | 35 | 379 | - | - | |
Hepe05g1473 | 512 | FunFam | Serine/threonine-protein kinase PBS1 | 163 | 378 | - | - | |
Hepe05g1473 | 512 | MobiDBLite | consensus disorder prediction | 16 | 31 | - | - | |
Hepe05g1473 | 512 | FunFam | Serine/threonine-protein kinase PBS1 | 59 | 162 | - | - | |
Hepe05g1473 | 512 | Pfam | Protein kinase domain | 91 | 298 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe05g1473 | 512 | Gene3D | Transferase(Phosphotransferase) domain 1 | 163 | 381 | - | - | |
Hepe05g1473 | 512 | SUPERFAMILY | Protein kinase-like (PK-like) | 72 | 370 | IPR011009 | - | |
Hepe05g1473 | 512 | ProSitePatterns | Protein kinases ATP-binding region signature. | 92 | 115 | IPR017441 | GO:0005524(InterPro) | |
Hepe05g1473 | 512 | SMART | serkin_6 | 86 | 363 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe05g1473 | 512 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 209 | 221 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe05g1473 | 512 | CDD | STKc_IRAK | 92 | 361 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g1152 | Hepe-Chr3:64977080 | Hepe05g1473 | Hepe-Chr5:64166351 | 8.70e-224 | dispersed | |
Hepe03g1280 | Hepe-Chr3:68312899 | Hepe05g1473 | Hepe-Chr5:64166351 | 1.12e-165 | dispersed | |
Hepe05g0223 | Hepe-Chr5:2634612 | Hepe05g1473 | Hepe-Chr5:64166351 | 1.14e-167 | dispersed | |
Hepe05g0225 | Hepe-Chr5:2666946 | Hepe05g1473 | Hepe-Chr5:64166351 | 5.43e-186 | dispersed | |
Hepe05g1473 | Hepe-Chr5:64166351 | Hepe07g1185 | Hepe-Chr7:28179256 | 1.43e-167 | dispersed | |
Hepe05g1473 | Hepe-Chr5:64166351 | Hepe01g0871 | Hepe-Chr1:72816633 | 3.98e-195 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72825 | PF00069 | Pkinase | 9.80E-46 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe05g1473 | - | - | - | 0.0 |