Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1473 ATGGGTGGGTGTTTTCCTTGTTTTGGATCCTCTGATGAAGACGGTAATGGCGTCAAGGAAGCTACTAAGAAGGATTCAGCTAAGGATGGCTCCACTGCTCAGTCTCACCATGTTAGCAGAGTGAACTCAGATAAATCGAAGTCGCGGAGTGTATCTGATGCTAAGAAGGAACCGACTGTTCAAAAGGATGGAACAACAGCACATATTGCAGCCCAAACATTTACATTTCGGGAGCTCGCTACTGCTACGAAGAACTTTAGACCAGAATGCTTGCTGGGAGAAGGGGGCTTTGGAAGGGTTTACAAAGGTCGCTTGGAGAGCACAGGACAGGTAGTGGCTGTGAAGCAGCTTGACCGTAATGGTCTTCAAGGAAACCGGGAATTTTTGGTGGAGGTTCTAATGCTTAGCCTGTTACATCACCCAAATCTTGTTAACTTGATAGGCTATTGTGCTGATGGGGATCAACGTCTTCTTGTTTATGAATTCATGCCATTGGGGTCGTTGGAAGATCATTTGCACGATTTTCCACCAGATAAGGAGCCCTTGGATTGGAATACTAGAATGAAGATTGCAGCTGGTGCTGCAAAAGGATTGGAATATTTGCATGACAAAGCAAACCCCCCTGTTATATATCGAGACTTGAAGTCGTCTAATATTCTTCTTGACGAGGGCTACCACCCCAAGCTGTCAGATTTCGGTCTTGCAAAACTGGGTCCAGTCGGTGATAAGACTCATGTCTCTACGAGAGTGATGGGAACATACGGTTATTGTGCTCCAGAGTATGCTATGACTGGTCAACTCACTCTCAAATCAGATGTATATAGTTTTGGAGTTGTCTTTCTAGAACTTATCACAGGGCGGAAGGCGATCGATAATACCAGAGGTCCGGGAGAGCATAATCTTGTAGCATGGGCTCGGCCGCTTTTTAAAGATCGCCGCAAGTTCCCTAAGATGGCCGATCCACTGCTGCAAGGCCGTTATCCCATGCGAGGACTTTATCAGGCATTGGCAGTTGCAGCAATGTGCTTGCAGGAACAGGCTGCTACAAGACCTCTAATCGGGGACGTGGTTACTGCTTTGACGTATTTAGCTTCCCAAACTTATGATCCTAATGCAGCTGCTTCTCAAAGCAATCGTATGGGTGGATCTACTCCACGATCCCGAGATGAGCGGAGAGGTTTACCAGATGGACTGGATAGCCCTGATGAGCGTGGCCGCGGACGCGGTTCCCCATCGAACTACAGAAACTCACCTGATTACCGAAAGAGAGACCTCCATAGGGAATTGAGTTGTGGAGGTACAGAGCTGAGCAAAATCGACACTGGAGGCGGGTCCGGTCGAAAGTGGGGTTTGGATGAGTTAGAACGACAAGATTCTCAGCGAGACAGTCCTGTATATACTGGGAGAGCAAGGGAAACACCGAGGAACCGCGACCTAAACAGAGAACGTGCAGTCGCAGAAGCAAAAGTGTGGGGTGAAAACTGGAGAGAGAGAAAGCGGGCGAATGCGCAAGGCAGCTTCGACGGTTCACAAGAATGA 1539 48.21 MGGCFPCFGSSDEDGNGVKEATKKDSAKDGSTAQSHHVSRVNSDKSKSRSVSDAKKEPTVQKDGTTAHIAAQTFTFRELATATKNFRPECLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDFPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRGPGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNAAASQSNRMGGSTPRSRDERRGLPDGLDSPDERGRGRGSPSNYRNSPDYRKRDLHRELSCGGTELSKIDTGGGSGRKWGLDELERQDSQRDSPVYTGRARETPRNRDLNRERAVAEAKVWGENWRERKRANAQGSFDGSQE 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 64166351 64171022 + Hsped.05g14730.1 Hepe05g1473 570738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1473 512 MobiDBLite consensus disorder prediction 417 433 - -
Hepe05g1473 512 MobiDBLite consensus disorder prediction 372 481 - -
Hepe05g1473 512 Gene3D Phosphorylase Kinase; domain 1 56 162 - -
Hepe05g1473 512 MobiDBLite consensus disorder prediction 1 64 - -
Hepe05g1473 512 MobiDBLite consensus disorder prediction 40 62 - -
Hepe05g1473 512 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g1473 512 MobiDBLite consensus disorder prediction 384 409 - -
Hepe05g1473 512 PANTHER OS07G0668900 PROTEIN 35 379 - -
Hepe05g1473 512 FunFam Serine/threonine-protein kinase PBS1 163 378 - -
Hepe05g1473 512 MobiDBLite consensus disorder prediction 16 31 - -
Hepe05g1473 512 FunFam Serine/threonine-protein kinase PBS1 59 162 - -
Hepe05g1473 512 Pfam Protein kinase domain 91 298 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g1473 512 Gene3D Transferase(Phosphotransferase) domain 1 163 381 - -
Hepe05g1473 512 SUPERFAMILY Protein kinase-like (PK-like) 72 370 IPR011009 -
Hepe05g1473 512 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524(InterPro)
Hepe05g1473 512 SMART serkin_6 86 363 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g1473 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g1473 512 CDD STKc_IRAK 92 361 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1152 Hepe-Chr3:64977080 Hepe05g1473 Hepe-Chr5:64166351 8.70e-224 dispersed
Hepe03g1280 Hepe-Chr3:68312899 Hepe05g1473 Hepe-Chr5:64166351 1.12e-165 dispersed
Hepe05g0223 Hepe-Chr5:2634612 Hepe05g1473 Hepe-Chr5:64166351 1.14e-167 dispersed
Hepe05g0225 Hepe-Chr5:2666946 Hepe05g1473 Hepe-Chr5:64166351 5.43e-186 dispersed
Hepe05g1473 Hepe-Chr5:64166351 Hepe07g1185 Hepe-Chr7:28179256 1.43e-167 dispersed
Hepe05g1473 Hepe-Chr5:64166351 Hepe01g0871 Hepe-Chr1:72816633 3.98e-195 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72825 PF00069 Pkinase 9.80E-46 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1473 - - - 0.0