Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1484 ATGGGGTGTGTTTTTGGGCGAGAGGTTTCTGCCAAGCCCGTCGAGGAGGCGGCGGAGGTAATTAGGGCTTCTTCCAAACCGGAGCTTGCTGAAGTTCAGGTTAATGCTAATGTTAGTAATGTTCGTAATGGTGGAAGTAGGAAGGAGGTTGATGATGATAGAGGTTTGAGGCCGAGAGGTGAGCGGCGGCGATCGTCGAGGCCGAATCCGAGATCGAGTAATCCGCCGAAACATGTGCATGGCGAGCAAGTCGCTGCCGGCTGGCCCTCTTGGCTCTCCGCCGTCGCCGGTGAGGCTATCAATGGATGGATTCCTCGCCGGGCTGATTCTTTTGAGAAGCTTGATAAAATTGGGCAAGGAACATATAGTAATGTGTACAAAGCAAGGGACACGTTGTCAGGGAAGATTGTGGCTCTAAAAAAGGTTCGGTTTGACAATTTGGAGCCTGAGAGTGTGAGATTTATGGCCCGAGAAATTCTCATCCTGCGACGTTTGGATCATCCCAATGTCGTAAAACTCGAAGGTTTGGTGACGTCCCGGATGTCATGTAGTTTATATCTTGTATTTGAATACATGGAGCATGATTTGGCTGGACTTGCTGCGAGCCCCGGGATCAAGTTTACCGAACCGCAGGTTAAATGTTACATGAACCAATTGTTATCAGGGCTTGAACACTGTCACAACCGTCATGTGCTGCACCGCGATATAAAAGGATCGAATCTTCTGATTGGTAATGATGGGATCCTTAGGATAGCTGATTTTGGATTGGCGTCCGTCTTTGATCCAAACCACAAGCAGCCAATGACAAGTAGGGTGGTTACTCTATGGTATCGGCCCCCCGAACTTCTTCTTGGAGCTACTGATTACGGCGTTGGTGTAGACCTTTGGAGTGCTGGCTGCATTTTAGCGGAGCTGTTAGCAGGAAAGCCTATCATGCCCGGTCGCACGGAGGTCGAGCAGCTACATAAGATATTCAAGTTATGTGGCTCTCCTACAGATGAATACTGGAAAAAGTCGAGGTTGCCACATGCGACCATATTCAAGCCTCAACATTCATACAAGAGATGCATATCAGAGACATTTAAAGACTTCCCGCCGTCATCTCTGCCATTAATCGAGACCCTTCTTGCAATCGACCCAGCCGAACGTCTGACCGCCACTGCTGCTTTACATAGTGAATTTTTCACTACCAAGCCATATGCTTGTGAGCCTTCCAGCCTTCCCAAGTATCCTCCAAGCAAGGAAATGGATGCAAAACTGCGGGATGAAGAAGCAAGAAGGCTAAGAGCTGTTGGCAGAAGCAATGCAGATGGGGTGAAGAAAACACGGGCACGTGATCGAGCTGTTCGGGCAATTCCTGCTCCAGAAGCCAATGCTGAGCTTCAAGCCAACCTCGATAGGCGGCGTCTCATAACACACGCAAATGCAAAGAGCAAGAGTGAAAAGTTTCCTCCTCCACATCAAGACGGAGCACTTGGCTATCCTCTGGGATCTTCGCATCACGTCGATCCAATCTACGATCCTCCCGACGTTCCATTTAGCACCATGAATTTCTCATATCCAAAAGCAAGCATCCAAACATGGTCTGGTCCCTTGATTGACCCAGCTGCTGTTGGTGCTCCAAGAAGGAAAAAACACACAGCAGGTGATGGTCATTCATCAAAATCACAGAGGGATAAAAATTCTGCTCGGATCTAA 1698 48.7 MGCVFGREVSAKPVEEAAEVIRASSKPELAEVQVNANVSNVRNGGSRKEVDDDRGLRPRGERRRSSRPNPRSSNPPKHVHGEQVAAGWPSWLSAVAGEAINGWIPRRADSFEKLDKIGQGTYSNVYKARDTLSGKIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAASPGIKFTEPQVKCYMNQLLSGLEHCHNRHVLHRDIKGSNLLIGNDGILRIADFGLASVFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPTDEYWKKSRLPHATIFKPQHSYKRCISETFKDFPPSSLPLIETLLAIDPAERLTATAALHSEFFTTKPYACEPSSLPKYPPSKEMDAKLRDEEARRLRAVGRSNADGVKKTRARDRAVRAIPAPEANAELQANLDRRRLITHANAKSKSEKFPPPHQDGALGYPLGSSHHVDPIYDPPDVPFSTMNFSYPKASIQTWSGPLIDPAAVGAPRRKKHTAGDGHSSKSQRDKNSARI 565
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 64285454 64289819 + Hsped.05g14840.1 Hepe05g1484 570749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1484 565 FunFam probable serine/threonine-protein kinase At1g54610 194 435 - -
Hepe05g1484 565 MobiDBLite consensus disorder prediction 475 496 - -
Hepe05g1484 565 MobiDBLite consensus disorder prediction 539 565 - -
Hepe05g1484 565 SUPERFAMILY Protein kinase-like (PK-like) 104 400 IPR011009 -
Hepe05g1484 565 MobiDBLite consensus disorder prediction 45 68 - -
Hepe05g1484 565 Pfam Protein kinase domain 111 395 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g1484 565 PANTHER CELL DIVISION PROTEIN KINASE 110 395 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Hepe05g1484 565 MobiDBLite consensus disorder prediction 34 83 - -
Hepe05g1484 565 Gene3D Transferase(Phosphotransferase) domain 1 194 434 - -
Hepe05g1484 565 FunFam probable serine/threonine-protein kinase At1g54610 98 193 - -
Hepe05g1484 565 ProSiteProfiles Protein kinase domain profile. 111 395 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g1484 565 CDD STKc_CDK9_like 111 395 - -
Hepe05g1484 565 Gene3D Phosphorylase Kinase; domain 1 98 193 - -
Hepe05g1484 565 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g1484 565 ProSitePatterns Protein kinases ATP-binding region signature. 117 140 IPR017441 GO:0005524(InterPro)
Hepe05g1484 565 SMART serkin_6 111 395 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g1484 565 MobiDBLite consensus disorder prediction 531 565 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0154 Hepe-Chr1:26638225 Hepe05g1484 Hepe-Chr5:64285454 1.10e-206 dispersed
Hepe05g1484 Hepe-Chr5:64285454 Hepe09g1602 Hepe-Chr9:46187710 4.80e-286 dispersed
Hepe05g1484 Hepe-Chr5:64285454 Hepe05g1488 Hepe-Chr5:64331821 4.86e-22 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72826 PF00069 Pkinase 2.20E-67 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1484 K08819 - csv:101217952 1035.02