Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1505 ATGGGTTGTGTTATTGGCAAGTGTTGCACTTCCAGTCGCTGCCCGCCTTCAGAAGAGGGAGATATGGCGCAATTCCGTGATGGCCCACCTTGTAGTTTTCAAGGAAAACATATACTAACTGGAAGGTCATTAGAGTCTGTTCTTGTGCCTGCTCACAACTACCACATGGAGTATTCGCTCCTCACCCAGCGTGGCTACTACCCTGATTCCCCTGATAAAGAAAACCAAGACAGCTTCTGTGTTAGTACACAAATCCGAGGTAACCCGAATATCCATTTCTTTGGTGTTTTTGATGGCCATGGTCAATTTGGATCGCAGTGTTCAAATTTCGTTAAGGATAGGGTTGTGCAAATACTAGGCAACGATCCAACATTGTTGGAAGATCCTGTTAAATCTTATAATTCGGCGTTTTTAACCACGAATGATGAATTGAATAATAGTGAGATTGATGATTCCATGAGTGGCACTACAGCTATTACTGTTCTTGTTGTTGGGAATACTCTTTATGTTGCGAATGTGGGTGATTCGAGGGCAGTTGTGGCTGTTAAAGATGGGAATCGAATTGTTGCCGAGGATATGTCCCATGATCAAACACCATTTAGGAAGGATGAGTGCGATAGGGTAAAGCTCGCCGGGGCTAGGGTGTTGACCATCGATCAAATTGAAGGGCTTAAGGATCCGGATATTCAAGTATGGGGCGATGAGGAAAACGAGGGAAATGATCCTCCTCGGTTGTGGTTTCCTAATAGCTTGTATCCTGGTACTGCATTTACACGGAGTGTTGGAGACAGTACAGCGGAGAAGATTGGTGTCACTGCTGTCCCTGAGGTTTCAGTAGTTCAGCTGACTCAAAACCATCTTTTCTTTGTCGTTGCAAGTGATGGAGTTTTCGAGTTCCTTACAAGTCAAGCTGTTGTTGATATGGCTGCAAGGTATACCGATCCACGGGATGCATGCTCTGCTATTGCCGGAGAATCATACAAGCTATGGTTGGAGCATGAAAACCGAACAGATGATATAACAATCATCATCGTTCATATCAAAGGCTTCTCTAATTCAGATGCTGTTGCAACTGCTGGGCTGAATGGGGTCCGCATAAGGCATACAAGTTCTGAGCGGGGAACCTCTGAGATATCAGCCTTCACTGGAAGTTCGGAGGCCTTTCGCTCCATGAGAAGTGATTTCTCAGATCTGCAGGTCTCTCAGCATGTGGGTTTAATGAACAGGAGCACGTCAATTGTCGTACCATCTCCCGCACAGCACCGACCATTGGAAGTGGAAGTGGGCTAA 1290 45.66 MGCVIGKCCTSSRCPPSEEGDMAQFRDGPPCSFQGKHILTGRSLESVLVPAHNYHMEYSLLTQRGYYPDSPDKENQDSFCVSTQIRGNPNIHFFGVFDGHGQFGSQCSNFVKDRVVQILGNDPTLLEDPVKSYNSAFLTTNDELNNSEIDDSMSGTTAITVLVVGNTLYVANVGDSRAVVAVKDGNRIVAEDMSHDQTPFRKDECDRVKLAGARVLTIDQIEGLKDPDIQVWGDEENEGNDPPRLWFPNSLYPGTAFTRSVGDSTAEKIGVTAVPEVSVVQLTQNHLFFVVASDGVFEFLTSQAVVDMAARYTDPRDACSAIAGESYKLWLEHENRTDDITIIIVHIKGFSNSDAVATAGLNGVRIRHTSSERGTSEISAFTGSSEAFRSMRSDFSDLQVSQHVGLMNRSTSIVVPSPAQHRPLEVEVG 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 64546973 64550453 - Hsped.05g15050.1 Hepe05g1505 570770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1505 429 Gene3D - 45 349 IPR036457 -
Hepe05g1505 429 SUPERFAMILY PP2C-like 46 349 IPR036457 -
Hepe05g1505 429 SMART PP2C_4 41 345 IPR001932 -
Hepe05g1505 429 PANTHER PROTEIN PHOSPHATASE 58 346 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe05g1505 429 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 52 349 - -
Hepe05g1505 429 CDD PP2Cc 73 347 IPR001932 -
Hepe05g1505 429 ProSiteProfiles PPM-type phosphatase domain profile. 57 347 IPR001932 -
Hepe05g1505 429 Pfam Protein phosphatase 2C 79 322 IPR001932 -
Hepe05g1505 429 ProSitePatterns PPM-type phosphatase domain signature. 93 101 IPR000222 GO:0043169(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1505 Hepe-Chr5:64546973 Hepe09g0786 Hepe-Chr9:7670562 3.84e-136 dispersed
Hepe03g0147 Hepe-Chr3:1782620 Hepe05g1505 Hepe-Chr5:64546973 1.13e-190 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1505 - - - 0.0