Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1580 ATGAAAACTTCAAACCCATTTCTCCCAAAATCTCTCCTCCTCATCTCCATTCTCCTCCTCCTCCCCAAACCTTCTGATCAAGCATCTCCGGCGCCATCGCCGTCTCCGTCACCACCGCCATTTCTCCCGAACCCGAGACTCCTCAAGGCCTACACCGCTCTCCAAGCTTGGAAACACGCCATCACCGCCGACCCGAACAACTTCACCGTCGACTGGTACGGCCCCAACGTCTGCAACTACTCCGGCGTCTTCTGCGCTCCCGCCCCCGATGATCCCTACATCCTCACCGTCGCCGGTATCGACGTCAACCACGCCAACCTCTCGGGCACCCTGCCCGATGACCTCGGCCTCCTGACCGACCTTGCCCTGTTCCACATCAACTCCAATCGCTTCTGTGGCACCATCCCCATTTCCTTCCGGTACCTCACTCTCCTCTTCGAGCTCGATCTCAGCAACAATGACTTCTCCGGCGAGTTCCCATCTGTTGTTTTATCTCTCCCATCTCTCAAATTCCTCGACATTCGATTCAACAAATTCCATGGCGATCTCCCTTCTCCCCTGTTTGACATGAAACTCGATGCTCTGTTCATCAACAACAACGATTTCAATATCTCCCTGCCGGAAAACATCGGCAATTCCCCTGTTTCTGTTCTGGTTTTTGCTAATAACAACATCAATGGCTGCCTCCCCTCGAGTTTGTCAAATATGAACAGCACACTCAATGAAATTATAATCACCAATAGTGGGTTGATTGGGTGTTTGCCGCCGGAAATTGGGTCGTTGAGCAATCTCACCGTCTTCGATGTCAGTGATAACAATCTCGTCGGACCGTTGCCGGACACGATTTCCGGAATGAAGAAATTGGAGCAGTTAAACGTCGCACATAACCAATTATCCGGCGAAATTCCGGCAAGTATCTGCTCGCTACCGAAATTGCAGAATTTCACCTACTCGTATAATTTCTTCTGTGGTGAGCCGTCGGTGTGCCTGAAACTTCCGGCCAGTGATGACCGGGAAAATTGTTTGCCGGAAAGGCCACTGCAACGTTCGCCCGAGGAATGTAAAGCTTTCTACTCCTACCCTGTTGATTGCGGCGTCTTTGGCTGTACTCGTCGGCCGCCACCACCACCCCCTCCGCCGCCGCCGCCACCACCACCACCACCGCCGCCGCCGCCGCCGCCTCCTCCTTATTATCAGTATCCGTAA 1206 53.32 MKTSNPFLPKSLLLISILLLLPKPSDQASPAPSPSPSPPPFLPNPRLLKAYTALQAWKHAITADPNNFTVDWYGPNVCNYSGVFCAPAPDDPYILTVAGIDVNHANLSGTLPDDLGLLTDLALFHINSNRFCGTIPISFRYLTLLFELDLSNNDFSGEFPSVVLSLPSLKFLDIRFNKFHGDLPSPLFDMKLDALFINNNDFNISLPENIGNSPVSVLVFANNNINGCLPSSLSNMNSTLNEIIITNSGLIGCLPPEIGSLSNLTVFDVSDNNLVGPLPDTISGMKKLEQLNVAHNQLSGEIPASICSLPKLQNFTYSYNFFCGEPSVCLKLPASDDRENCLPERPLQRSPEECKAFYSYPVDCGVFGCTRRPPPPPPPPPPPPPPPPPPPPPPPPYYQYP 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 65390959 65392164 - Hsped.05g15800.1 Hepe05g1580 570845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1580 401 Gene3D Ribonuclease Inhibitor 49 339 IPR032675 -
Hepe05g1580 401 MobiDBLite consensus disorder prediction 371 401 - -
Hepe05g1580 401 Pfam Leucine rich repeat N-terminal domain 52 85 IPR013210 -
Hepe05g1580 401 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 236 325 - -
Hepe05g1580 401 Pfam Leucine rich repeat 239 298 IPR001611 GO:0005515(InterPro)
Hepe05g1580 401 FunFam Leucine-rich repeat extensin-like protein 1 51 212 - -
Hepe05g1580 401 SUPERFAMILY L domain-like 50 333 - -
Hepe05g1580 401 Pfam Leucine Rich Repeat 168 188 IPR001611 GO:0005515(InterPro)
Hepe05g1580 401 Pfam Leucine Rich Repeat 145 163 IPR001611 GO:0005515(InterPro)
Hepe05g1580 401 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 38 393 IPR051582 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1580 Hepe-Chr5:65390959 Hepe08g2577 Hepe-Chr8:67536518 4.13e-36 dispersed
Hepe02g0129 Hepe-Chr2:1454145 Hepe05g1580 Hepe-Chr5:65390959 1.00e-37 transposed
Hepe05g1580 Hepe-Chr5:65390959 Hepe09g0745 Hepe-Chr9:7134047 2.33e-31 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1580 - - - 0.0