Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1581 ATGGGTAATGCAGATTTGGAATGCCCACATCGAGTAGCCATTCCACCAACAAAGCCATTTTTCGAGTCCCTAAGCTCAAATCTCAAAGAAACCTTCTTCCCCGATGACCCTTTCAAACAATTCAAAAACCAACCTCTCCCATCCCAAATCCTCCTCTGGCTCAAATACTTCATCCCCATTCTCGAATGGGCTCCTCACTACTCCCTCCACTTCTTCAAAGCCGACCTCGTCTCCGGTATCACCATCGCCAGCCTCGCCGTCCCTCAGGGCATCAGCTACGCCAATCTCGCTAGCATCCCTCCCATCATCGGGCTCTATTCCAGCTTTATTCCACCGTTGGTATACGCCATGTTCGGTAGCTCGAAAGATTTGGCCGTGGGGACCGTGGCGGTGGCGTCGCTACTCATGTCCGCCATGTTGGGGAAGGAAGTAAGTCCCGTGGAGCATCCGAAACAATACGTTCAATTGGTTTTCACCGCTACGTTCTTCGCTGGAGTTTTTCAAGCCTCTCTCGGCTTTCTTAGATTGGGGTTGATTGTAGACTTTTTGTCGCATGCAACAATAGTGGGGTTCATGGGAGGTGCGGCAACGGTGGTTTGTCTTCAACAACTAAAAGGCGTAATGGGATTAGTTCATTTTACGCATGAGACTGATATTATATCCGTTATGCGCTCTCTTTTCTCTCAAATTCATCAGTGGAGATGGGAAAGTATTGTTTTGGGATGTTGTTTTCTCTTCTTTCTTCTCCTCACTCGATACTTCAGCAAGAAGAAACCAATCTTCTTCTGGATAAGTGCATTGGCGCCTTTGACTTCAGTCATCTTAGGAAGCCTTCTTGTCTACTTCACCCACGCTGAAAAGCATGGAGTTCAAGTGATTGGGCATTTGAAGAAAGGGTTGAATCCCCCATCTGTATCTGATTTAGTATTCGGATCTCCCCATCTCGCCATAGCCATCAAAACAGGGATCATCACCGGAATCATAGGCCTTGCTGAAGGAGTTGCAGTGGGAAGAAGTTTTGCTGCATTTAAGGGTTACCATATTGATGGCAACAAGGAGATGATAGCATTTGGGATGATGAACATTGTTGGTTCCTGCACTTCTTGCTACCTTACTGCAGGGCCATTTTCAAGAACTGCTGTAAATTTCAATGCAGGATGTAAAACTGCGGTCTCGAATATCGTCATGGCAATCGCTCTGATGATCACTCTGTTGTTTTTGACGCCATTTTTCCATTACACACCCCTGGTGGTACTCTCCTCCATAATCATCACTGCTATGCTTGGCTTAATCAACTATGAAGAAGTCATCCACCTTTGGAAAATTGACAAATTTGACTTTGTCGTCTGCCTCGGTGCATATATCGGTGTCGTCTTTGGCAGTGTTGAAACAGGCTTGATCATTGCGATCGCACTCTCTGTGTTAAGGGTTCTTCTCGTGATCGCTAGGCCAAGAACTTTAGTATTAGGCAACATTCCCAACTCCACAATTTACAGAAGCATTGATCAATACCCAACAGCTAACCATGTGCCTGGAATTCTCATCCTTCAATTGGAAGCACCAATCTATTTTGCCAACTCAAACTACCTGAGAGAAAGGCTTTCAAGATGGATTACAGACGAAGAAGAGAGGATAAAATCATCAGGAGAAACCAGCTTGCAGTACATAATTCTAGACATTTCCGGTGTAAGTAGCATTGACTCAAGTGGGATCAGCATGCTTAAAGAGATTAAGAAGAGTACTGAAAGAAATGGTCTCAAACTTGTGCTTGCAAATCCAAGAAGTGAAGTGATCAAAAAGCTAAACAAATCGAAGTTCATCGAAGCGATCGGGCAGGAATGGATCTATCTTACAGTAGGAGAGGCTGTAACAGCCTGCAACTTCATGCTTCACACTTGCAAGCCAAATTCTGCTGCTGCTGAATTAGATTCACCTTTGAACAATGTCTAG 1950 44.97 MGNADLECPHRVAIPPTKPFFESLSSNLKETFFPDDPFKQFKNQPLPSQILLWLKYFIPILEWAPHYSLHFFKADLVSGITIASLAVPQGISYANLASIPPIIGLYSSFIPPLVYAMFGSSKDLAVGTVAVASLLMSAMLGKEVSPVEHPKQYVQLVFTATFFAGVFQASLGFLRLGLIVDFLSHATIVGFMGGAATVVCLQQLKGVMGLVHFTHETDIISVMRSLFSQIHQWRWESIVLGCCFLFFLLLTRYFSKKKPIFFWISALAPLTSVILGSLLVYFTHAEKHGVQVIGHLKKGLNPPSVSDLVFGSPHLAIAIKTGIITGIIGLAEGVAVGRSFAAFKGYHIDGNKEMIAFGMMNIVGSCTSCYLTAGPFSRTAVNFNAGCKTAVSNIVMAIALMITLLFLTPFFHYTPLVVLSSIIITAMLGLINYEEVIHLWKIDKFDFVVCLGAYIGVVFGSVETGLIIAIALSVLRVLLVIARPRTLVLGNIPNSTIYRSIDQYPTANHVPGILILQLEAPIYFANSNYLRERLSRWITDEEERIKSSGETSLQYIILDISGVSSIDSSGISMLKEIKKSTERNGLKLVLANPRSEVIKKLNKSKFIEAIGQEWIYLTVGEAVTACNFMLHTCKPNSAAAELDSPLNNV 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 65397265 65403470 - Hsped.05g15810.1 Hepe05g1581 570846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1581 649 CDD STAS_SulP_like_sulfate_transporter 504 619 - -
Hepe05g1581 649 FunFam Sulfate transporter 31 483 629 - -
Hepe05g1581 649 ProSiteProfiles STAS domain profile. 503 626 IPR002645 -
Hepe05g1581 649 Pfam Sulfate permease family 72 451 IPR011547 GO:0016020(InterPro)
Hepe05g1581 649 PANTHER SULFATE TRANSPORTER 27 626 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe05g1581 649 ProSitePatterns SLC26A transporters signature. 101 122 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Hepe05g1581 649 Gene3D STAS domain 483 628 IPR036513 -
Hepe05g1581 649 SUPERFAMILY SpoIIaa-like 506 626 IPR036513 -
Hepe05g1581 649 Pfam STAS domain 504 622 IPR002645 -
Hepe05g1581 649 NCBIfam sulfate permease 59 622 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1581 Hepe-Chr5:65397265 Hepe07g0650 Hepe-Chr7:7440220 4.01e-189 dispersed
Hepe03g2029 Hepe-Chr3:77628122 Hepe05g1581 Hepe-Chr5:65397265 0.0 wgd
Hepe05g1581 Hepe-Chr5:65397265 Hepe09g0746 Hepe-Chr9:7147260 3.40e-225 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1581 K17471 - csv:101203205 1164.44