Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1586 ATGAATCGTCCCCGCCGAGTGAAGGAGGAGCATTCCGCGTCGAGTTCTTCATTTTCCGGCGGAGCGCCGCCGCACACGGCGGCTCCTCAGCCGCTGAAAGGGCTTAACGAAGCGGGTCCTCCGCCATTTCTGACAAAAACATATGAAATCATCGATGATACAACCACCAATCATATTGTCTCTTGGAGTAGAGGAAACAACAGCTTCGTCGTTTGGGATCCTCAATCCTTTTCCTTGAGCCTTCTTCCCAAATACTTCAAACATGGCAATTTTTCAAGCTTCGTTAGACAGTTAAATACCTATGGATTTAGAAAGGTGGATCCAGAGAAGTGGGAATTTGCTCATGAAGGTTTCTTGAAAGGGCAGAAACATCTTCTGAAGCTGATTCGGAGGAGGAAATCGCTGCAACTTACTTCGGATTCTTGCGTCGAGGTCGGACGGTTTGGGCTCGACGGAGAGCTCGATCGCCTGCATCGTGACAAGCAGGTTTTAATGGGGGAGGTGGTGAAGCTAAGACAACAGCAGCAAAGCACCAAAACATACCTTGAAACAATGGAACAACGGCTGAAAAAGACAGAGACAAGACAACAACAAATGATGAGCTTCTTAGCAAAAGCATTTCAAAACCCCGATGTCTTCCAACAATTAATCAACCAAAAAGATCACAAGCACAAAGAATTAGAACATAGCATGGATCGAAAACGACGACGACACATCGACCAACCTCCTTGTGCCGACTTTGATGAAGAGGAAGATGATGAAGAAGAAGAGCCCTTCGTCGACGACGACATCCACGTGGATGTCGTCGACTTACTAATGAACCAAAACAATCATCATCATGATCACCAAGAAGAAATTGATGAGATTGGTTTAGAGAGAGATCATTTGAATGAAGGGTTTTGGGAGAATTTGTTGAATGAGGCAAATGAAGAAGAAAATGGATTTGGGGTTTGTGGGTTTGAGGAACAAGAGGATGAGGATGAAGATGGAGATCAATTGGTGGATCAATTTGGATTTTTGAGTTCCAATTTTAAATAG 1038 44.51 MNRPRRVKEEHSASSSSFSGGAPPHTAAPQPLKGLNEAGPPPFLTKTYEIIDDTTTNHIVSWSRGNNSFVVWDPQSFSLSLLPKYFKHGNFSSFVRQLNTYGFRKVDPEKWEFAHEGFLKGQKHLLKLIRRRKSLQLTSDSCVEVGRFGLDGELDRLHRDKQVLMGEVVKLRQQQQSTKTYLETMEQRLKKTETRQQQMMSFLAKAFQNPDVFQQLINQKDHKHKELEHSMDRKRRRHIDQPPCADFDEEEDDEEEEPFVDDDIHVDVVDLLMNQNNHHHDHQEEIDEIGLERDHLNEGFWENLLNEANEEENGFGVCGFEEQEDEDEDGDQLVDQFGFLSSNFK 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 65489523 65492523 + Hsped.05g15860.1 Hepe05g1586 570851

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1586 345 MobiDBLite consensus disorder prediction 228 244 - -
Hepe05g1586 345 MobiDBLite consensus disorder prediction 1 38 - -
Hepe05g1586 345 PRINTS Heat shock factor (HSF) domain signature 94 106 IPR000232 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe05g1586 345 PRINTS Heat shock factor (HSF) domain signature 43 66 IPR000232 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe05g1586 345 PRINTS Heat shock factor (HSF) domain signature 81 93 IPR000232 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe05g1586 345 FunFam Heat shock transcription factor 1 36 133 - -
Hepe05g1586 345 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 17 322 IPR027725 GO:0000978(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006357(PANTHER)|GO:0034605(PANTHER)
Hepe05g1586 345 SUPERFAMILY Winged helix DNA-binding domain 39 132 IPR036390 -
Hepe05g1586 345 Coils Coil 154 174 - -
Hepe05g1586 345 Coils Coil 217 237 - -
Hepe05g1586 345 Pfam HSF-type DNA-binding 43 132 IPR000232 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe05g1586 345 MobiDBLite consensus disorder prediction 228 258 - -
Hepe05g1586 345 Gene3D - 36 133 IPR036388 -
Hepe05g1586 345 ProSitePatterns HSF-type DNA-binding domain signature. 82 106 IPR000232 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe05g1586 345 SMART hsfneu3 39 132 IPR000232 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1586 K09419 - - csv:101218269 418.698
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1586 Hepe-Chr5:65489523 Hepe08g1399 Hepe-Chr8:16517700 9.49e-74 dispersed
Hepe01g0614 Hepe-Chr1:67503291 Hepe05g1586 Hepe-Chr5:65489523 1.04e-45 transposed
Hepe06g1001 Hepe-Chr6:57832923 Hepe05g1586 Hepe-Chr5:65489523 2.12e-70 transposed
Hepe03g2034 Hepe-Chr3:77715738 Hepe05g1586 Hepe-Chr5:65489523 3.54e-90 wgd
Hepe05g1586 Hepe-Chr5:65489523 Hepe06g1976 Hepe-Chr6:70986922 3.87e-93 wgd
Hepe05g1586 Hepe-Chr5:65489523 Hepe09g0754 Hepe-Chr9:7262005 2.70e-50 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g557 . . . Bda08g00255 . . . Bma05g01091 . . Cma06g01370 . Car06g01187 Car14g01574 Sed02g1342 . Cpe03g01464 Bhi01g00760 Tan10g0791 Cmetu06g1701 . Hepe05g1586 . Lcy11g1582 . . . . . . . . . . . Lsi05g01637 . . Cme06g00575 . . . . Bpe05g00882 . . . . . . . . . . . . . . . . . . . Cla05g00509 Cam05g0560 Cec05g0572 Cco05g0570 Clacu05g0557 Cmu05g0528 Cre05g0597 . Csa03g01291 . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Hepe05g1586 . 23 237 HSF AT4G17750 53.4 5.0e-60 229.2
Hepe06g1976 . 40 243 HSF AT4G17750 54.4 2.3e-57 220.3
Hepe08g1399 . 35 235 HSF AT4G17750 51.8 1.3e-55 214.5
Hepe08g2670 . 63 250 HSF AT4G17750 51.5 3.1e-46 183.3
Hepe01g1775 . 20 118 HSF AT4G17750 70.7 8.3e-39 158.7
Hepe08g1292 . 14 115 HSF AT4G17750 67.6 9.1e-38 155.2
Hepe04g1245 . 5 170 HSF AT4G17750 51.2 3.5e-37 153.3
Hepe05g1586 . 41 241 HSF AT5G16820 56.8 1.6e-58 224.2
Hepe06g1976 . 41 247 HSF AT5G16820 54.2 5.0e-57 219.2
Hepe03g2034 . 54 264 HSF AT5G16820 56.1 1.1e-56 218.0
Hepe06g1001 . 24 517 HSF AT1G32330 54.1 3.2e-120 429.1
Hepe03g2034 . 26 260 HSF AT1G32330 50.6 7.0e-59 225.3
Hepe05g1586 . 29 237 HSF AT1G32330 51.1 1.3e-57 221.1
Hepe06g1976 . 29 227 HSF AT1G32330 52.7 2.8e-55 213.4
Hepe08g1292 . 20 120 HSF AT1G32330 68.3 6.8e-38 155.6
Hepe01g1775 . 22 117 HSF AT1G32330 71.9 2.0e-37 154.1
Hepe06g1976 . 41 262 HSF AT3G02990 53.1 1.6e-60 230.7
Hepe03g2034 . 54 269 HSF AT3G02990 54.1 4.0e-59 226.1
Hepe05g1586 . 41 240 HSF AT3G02990 55.0 3.4e-58 223.0
Hepe05g1586 . 29 236 HSF AT2G26150 54.9 6.8e-64 241.5
Hepe03g2034 . 21 259 HSF AT2G26150 52.1 4.1e-61 232.3
Hepe06g1001 . 29 243 HSF AT2G26150 58.3 7.0e-61 231.5
Hepe08g2670 . 53 275 HSF AT2G26150 50.7 1.7e-54 210.3
Hepe07g1835 . 5 150 HSF AT2G26150 53.4 5.2e-40 162.2
Hepe06g1001 . 15 220 HSF AT5G03720 52.9 3.5e-51 199.5
Hepe05g1784 . 13 209 HSF AT4G18880 50.5 3.1e-52 203.0
Hepe05g1784 . 7 464 HSF AT4G13980 52.7 1.0e-115 414.1
Hepe05g1586 . 29 216 HSF AT5G43840 55.3 2.6e-53 206.1
Hepe08g1399 . 24 227 HSF AT5G43840 50.5 1.2e-45 180.6
Hepe06g1976 . 29 346 HSF AT3G22830 51.0 1.3e-87 320.5
Hepe05g1586 . 11 241 HSF AT3G22830 61.2 4.6e-80 295.4
Hepe06g1001 . 31 242 HSF AT3G22830 59.0 5.2e-63 238.8
Hepe08g1399 . 24 233 HSF AT3G22830 54.5 5.7e-62 235.3
Hepe08g2670 . 53 253 HSF AT3G22830 50.2 8.5e-50 194.9
Hepe06g1976 . 29 323 HSF AT3G51910 52.3 8.5e-70 260.8
Hepe03g2034 . 38 260 HSF AT3G51910 58.9 3.1e-64 242.3
Hepe05g1586 . 29 237 HSF AT3G51910 57.3 2.1e-60 229.6
Hepe08g1399 . 24 240 HSF AT3G51910 50.7 1.6e-52 203.4
Hepe08g1399 . 24 223 HSF AT3G63350 52.5 1.9e-48 189.9
Hepe08g1292 . 17 117 HSF AT5G62020 68.3 5.9e-40 161.8
Hepe01g1775 . 16 119 HSF AT4G11660 73.1 2.2e-44 176.8
Hepe08g1292 . 16 121 HSF AT4G11660 69.8 1.1e-43 174.5
Hepe04g1245 . 2 100 HSF AT4G11660 70.7 4.4e-40 162.5
Hepe05g0801 . 22 120 HSF AT4G11660 68.7 2.0e-37 153.7
Hepe09g1181 . 11 108 HSF AT4G11660 67.3 3.5e-37 152.9
Hepe06g1001 . 33 126 HSF AT4G11660 69.1 1.3e-36 151.0
Hepe05g0801 . 19 223 HSF AT2G41690 54.3 7.9e-51 197.6
Hepe04g0401 . 27 215 HSF AT2G41690 55.6 9.1e-47 184.1
Hepe01g1775 . 1 343 HSF AT1G46264 50.7 1.0e-88 323.9
Hepe09g1181 . 12 198 HSF AT1G46264 57.5 2.5e-58 223.0
Hepe06g1001 . 33 136 HSF AT1G46264 73.1 8.1e-41 164.9
Hepe05g1784 . 7 104 HSF AT1G46264 71.4 4.2e-37 152.5
Hepe09g0754 . 11 183 HSF AT3G24520 71.1 5.7e-68 255.0
Hepe08g2589 . 48 218 HSF AT3G24520 62.6 3.7e-59 225.7
Hepe05g1586 . 23 237 HSF AT4G17750 53.4 5.0e-60 229.2
Hepe06g1976 . 40 243 HSF AT4G17750 54.4 2.3e-57 220.3
Hepe08g1399 . 35 235 HSF AT4G17750 51.8 1.3e-55 214.5
Hepe08g2670 . 63 250 HSF AT4G17750 51.5 3.1e-46 183.3
Hepe01g1775 . 20 118 HSF AT4G17750 70.7 8.3e-39 158.7
Hepe08g1292 . 14 115 HSF AT4G17750 67.6 9.1e-38 155.2
Hepe04g1245 . 5 170 HSF AT4G17750 51.2 3.5e-37 153.3
Hepe05g1586 . 41 241 HSF AT5G16820 56.8 1.6e-58 224.2
Hepe06g1976 . 41 247 HSF AT5G16820 54.2 5.0e-57 219.2
Hepe03g2034 . 54 264 HSF AT5G16820 56.1 1.1e-56 218.0
Hepe06g1001 . 24 517 HSF AT1G32330 54.1 3.2e-120 429.1
Hepe03g2034 . 26 260 HSF AT1G32330 50.6 7.0e-59 225.3
Hepe05g1586 . 29 237 HSF AT1G32330 51.1 1.3e-57 221.1
Hepe06g1976 . 29 227 HSF AT1G32330 52.7 2.8e-55 213.4
Hepe08g1292 . 20 120 HSF AT1G32330 68.3 6.8e-38 155.6
Hepe01g1775 . 22 117 HSF AT1G32330 71.9 2.0e-37 154.1
Hepe06g1976 . 41 262 HSF AT3G02990 53.1 1.6e-60 230.7
Hepe03g2034 . 54 269 HSF AT3G02990 54.1 4.0e-59 226.1
Hepe05g1586 . 41 240 HSF AT3G02990 55.0 3.4e-58 223.0
Hepe05g1586 . 29 236 HSF AT2G26150 54.9 6.8e-64 241.5
Hepe03g2034 . 21 259 HSF AT2G26150 52.1 4.1e-61 232.3
Hepe06g1001 . 29 243 HSF AT2G26150 58.3 7.0e-61 231.5
Hepe08g2670 . 53 275 HSF AT2G26150 50.7 1.7e-54 210.3
Hepe07g1835 . 5 150 HSF AT2G26150 53.4 5.2e-40 162.2
Hepe06g1001 . 15 220 HSF AT5G03720 52.9 3.5e-51 199.5
Hepe05g1784 . 13 209 HSF AT4G18880 50.5 3.1e-52 203.0
Hepe05g1784 . 7 464 HSF AT4G13980 52.7 1.0e-115 414.1
Hepe05g1586 . 29 216 HSF AT5G43840 55.3 2.6e-53 206.1
Hepe08g1399 . 24 227 HSF AT5G43840 50.5 1.2e-45 180.6
Hepe06g1976 . 29 346 HSF AT3G22830 51.0 1.3e-87 320.5
Hepe05g1586 . 11 241 HSF AT3G22830 61.2 4.6e-80 295.4
Hepe06g1001 . 31 242 HSF AT3G22830 59.0 5.2e-63 238.8
Hepe08g1399 . 24 233 HSF AT3G22830 54.5 5.7e-62 235.3
Hepe08g2670 . 53 253 HSF AT3G22830 50.2 8.5e-50 194.9
Hepe06g1976 . 29 323 HSF AT3G51910 52.3 8.5e-70 260.8
Hepe03g2034 . 38 260 HSF AT3G51910 58.9 3.1e-64 242.3
Hepe05g1586 . 29 237 HSF AT3G51910 57.3 2.1e-60 229.6
Hepe08g1399 . 24 240 HSF AT3G51910 50.7 1.6e-52 203.4
Hepe08g1399 . 24 223 HSF AT3G63350 52.5 1.9e-48 189.9
Hepe08g1292 . 17 117 HSF AT5G62020 68.3 5.9e-40 161.8
Hepe01g1775 . 16 119 HSF AT4G11660 73.1 2.2e-44 176.8
Hepe08g1292 . 16 121 HSF AT4G11660 69.8 1.1e-43 174.5
Hepe04g1245 . 2 100 HSF AT4G11660 70.7 4.4e-40 162.5
Hepe05g0801 . 22 120 HSF AT4G11660 68.7 2.0e-37 153.7
Hepe09g1181 . 11 108 HSF AT4G11660 67.3 3.5e-37 152.9
Hepe06g1001 . 33 126 HSF AT4G11660 69.1 1.3e-36 151.0
Hepe05g0801 . 19 223 HSF AT2G41690 54.3 7.9e-51 197.6
Hepe04g0401 . 27 215 HSF AT2G41690 55.6 9.1e-47 184.1
Hepe01g1775 . 1 343 HSF AT1G46264 50.7 1.0e-88 323.9
Hepe09g1181 . 12 198 HSF AT1G46264 57.5 2.5e-58 223.0
Hepe06g1001 . 33 136 HSF AT1G46264 73.1 8.1e-41 164.9
Hepe05g1784 . 7 104 HSF AT1G46264 71.4 4.2e-37 152.5
Hepe09g0754 . 11 183 HSF AT3G24520 71.1 5.7e-68 255.0
Hepe08g2589 . 48 218 HSF AT3G24520 62.6 3.7e-59 225.7
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011933 1 1 0 1 1 1 2 1 1 1 1 1 0 1 1 1 1 2 2 1 1 1 1 0 1 1 1 2 1 0 30
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55657 PF00447 HSF_DNA-bind 1.10E-31 CL0123 Hepe TF