Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1625 ATGAAACTTTCTCGTCTAAACTCCCTCCGGCGAGTTCAGTCCGGCGAGTTCATCATGAAGCTCCCCGACGATCAAGATGAATTCAAAAGGCCCCAATTCCCTCTTGATTCCAATTCTTACAAAATCGTCGACGAAATCGGTGTCGGCGTCAGCGCCGTCGTCTACAAAGCCATTTGCATTCCGATGAACTCTGCGGTGGTGGCGATCAAGGCCATCGACCTCGACCGGTCTCGAGCCGATTTCGACGACATCCGACGAGAAGCAAAAATTCTATCACTTCTCTCTCACCCCAACATTCTAAACGCCCACTGTTCTTTCACCGTCGATCGTCAGCTTTGGGTCGTGATGCCGTTCATGTCCGCCGGATCATTACAGTCCATCATTACCTCGTCGTTCCCCGACGGCTTGCCGGAGCCCTGCATCGCCGTCGTTCTCCGCGAAATTCTAAACGCTCTGTCTTACCTCCACGACCAAGGCCACCTCCACCGCGACATCAAAGCTGGCAACATTCTAATGGACTCAAATGGGTCCGTCAAACTCGCCGACTTCGGAGTTTCGGCGTCGATTTTCGAGGCGAATTTAAAACAGGGGATATCAAATTCTCCGATGCTGAAAGAAGTCGCCGGAACGCCGTACTGGATGGCGCCGGAGGTAATCCACTCGCACAATGGGTACAGTCTAAAAGCCGATATTTGGTCATTTGGAATCACGGCGCTGGAATTAGCCCACGGACGGCCTCCCCTGTCTCATCTCCCTCCTTCCAAATCCCTCCTCCTAAAAATCACACGGCAGTTTCGATTCTCCGATTACGAGAAGACCCAAAACAGCAAGAAACAGAGCAAATTCTCCAAAGGGTTTAAGGAATTGGTCGCGTCCTGCCTCGATCAGGAGCCGTCGAAAAGACCCTGCGCCGAGAAATTGCTCAAACACTCATTCTTCAGGAATTGCAAGGGCCCTGAACTTCTAATGAAAACTATATTACAGGGTTTGCCGAGCGTTGAAGAACGGTTCAAATTGGGGAAATTGCAGAGATTGCCGTCGATGAAAACAGAGGACGAGGAGGAGGAGGAATTGGAGAAGGAGATTGTGAAACAGAGGAGGATCAGTGGGTGGGATTTCAACGAGGATGGGCTAGAATTGGAGGAGTGTTCGATTATAAAACAGGTTCGATTCGGGGGGGAAGCGATGATCGAGGAGGAGGGTGTGGATAGAGAGTGGATAATGGGGGGATTGGTGGCGCTGAAGAGGAGCTTGGAGGAACAGAGGAGGGCGGTGGGGAGTTTGATAGAGGTGATTGAAGGGGAGAAAGGAGGAGAGATTAGCAGAGAAGAGCAGATGGGGAGATTGATGGAGAAGATGAAGAGGGAGTTGGAAATTGAGAGGAAGAGGAACTTTGAATTGGAGATGGAGATGGAATTTCTTAAGATTCAGATTTCTGCTGCTTATAATGGCGGTGGTAGTTCTACCGCCATTGATGACTGA 1482 50.47 MKLSRLNSLRRVQSGEFIMKLPDDQDEFKRPQFPLDSNSYKIVDEIGVGVSAVVYKAICIPMNSAVVAIKAIDLDRSRADFDDIRREAKILSLLSHPNILNAHCSFTVDRQLWVVMPFMSAGSLQSIITSSFPDGLPEPCIAVVLREILNALSYLHDQGHLHRDIKAGNILMDSNGSVKLADFGVSASIFEANLKQGISNSPMLKEVAGTPYWMAPEVIHSHNGYSLKADIWSFGITALELAHGRPPLSHLPPSKSLLLKITRQFRFSDYEKTQNSKKQSKFSKGFKELVASCLDQEPSKRPCAEKLLKHSFFRNCKGPELLMKTILQGLPSVEERFKLGKLQRLPSMKTEDEEEEELEKEIVKQRRISGWDFNEDGLELEECSIIKQVRFGGEAMIEEEGVDREWIMGGLVALKRSLEEQRRAVGSLIEVIEGEKGGEISREEQMGRLMEKMKRELEIERKRNFELEMEMEFLKIQISAAYNGGGSSTAIDD 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 66089647 66091165 + Hsped.05g16250.1 Hepe05g1625 570890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1625 493 Coils Coil 348 368 - -
Hepe05g1625 493 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524(InterPro)
Hepe05g1625 493 Gene3D Transferase(Phosphotransferase) domain 1 122 366 - -
Hepe05g1625 493 SMART serkin_6 40 313 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g1625 493 SUPERFAMILY Protein kinase-like (PK-like) 27 328 IPR011009 -
Hepe05g1625 493 FunFam Serine/threonine-protein kinase BLUS1 29 118 - -
Hepe05g1625 493 Pfam Protein kinase domain 40 313 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g1625 493 ProSiteProfiles Protein kinase domain profile. 40 313 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g1625 493 Gene3D Phosphorylase Kinase; domain 1 29 118 - -
Hepe05g1625 493 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 32 388 IPR047173 GO:0043539(InterPro)|GO:1902456(PANTHER)
Hepe05g1625 493 Coils Coil 450 477 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1625 Hepe-Chr5:66089647 Hepe06g0942 Hepe-Chr6:57015303 8.41e-104 dispersed
Hepe05g1625 Hepe-Chr5:66089647 Hepe02g1817 Hepe-Chr2:27204815 1.13e-109 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72834 PF00069 Pkinase 1.40E-59 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1625 K08835 - csv:101215648 780.4