Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1629 ATGATGGTTTCGAAGGAGCAGGTGGGGCTGCCGGGTGTCGATCATCATCACCCGGCGGCGGTCAACTCACCAATCTTCAAACAAACCGATGAAAACAGTGGCGGCAGCCGCGACGACGACGACGACAACAACTTCGACGAGCCGAAAGAAGGCGCCGTCGAGGCTGGAAGTAGGCGACCAAGAGGCCGTCCTCCCGGATCTAAAAACAAGCCAAAACCCCCAATCTTCGTCACACGTGACACTCCCAACGCCCTTCGGAGCTACGTCCTAGAGGTCGCCGCCGGCTCCGATGTAGCTGATTGCATCGCCCAATTCGCCCGCAAGCGCCAGCGTGGCGTCTGCGTCCTCAGTGCAACCGGCTTGGTCGCCAACGTCACCTTACGTCAGCCCGCCGCCCCCGGTTCAGTAATGCCACTCCAAGGAAGGTTCGAGATTCTATCTTTAACCGGAGCCTTCCTACCTGGCCCGTCCCCGCCGGGATCCACTGGCCTCACCGTTTACTTGTCCGGCGGTCAGGGCCAGGTCGTCGGCGGGAGCGTGGTTGGCTCGCTTGTGGCGGCCGGACCCATTATGGTAATTGCTGCCACTTTTGCTAATGCCACTTATGAAAGGTTGCCTCTTGAAGATGCCGACGACCATGAAGTTGGGAGTGGCTCCGCCTCACACGGCGGCCCTAGAAGCCCGCCGCCGGAAATTAGACCCAGTGGAGGACTGCAGATGCCGATTGGGATGCCGGAATCCACTTTGCCGTTGTATAATTTACTGCCGGATATGATGCCCAACGCCGTTCAGCTTAGCCACGACGGCTAA 810 59.38 MMVSKEQVGLPGVDHHHPAAVNSPIFKQTDENSGGSRDDDDDNNFDEPKEGAVEAGSRRPRGRPPGSKNKPKPPIFVTRDTPNALRSYVLEVAAGSDVADCIAQFARKRQRGVCVLSATGLVANVTLRQPAAPGSVMPLQGRFEILSLTGAFLPGPSPPGSTGLTVYLSGGQGQVVGGSVVGSLVAAGPIMVIAATFANATYERLPLEDADDHEVGSGSASHGGPRSPPPEIRPSGGLQMPIGMPESTLPLYNLLPDMMPNAVQLSHDG 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 66159109 66166634 - Hsped.05g16290.1 Hepe05g1629 570894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1629 269 CDD DUF296 86 168 IPR005175 -
Hepe05g1629 269 MobiDBLite consensus disorder prediction 1 79 - -
Hepe05g1629 269 MobiDBLite consensus disorder prediction 211 238 - -
Hepe05g1629 269 Gene3D - 85 215 - -
Hepe05g1629 269 FunFam AT-hook motif nuclear-localized protein 85 213 - -
Hepe05g1629 269 ProSiteProfiles PPC domain profile profile. 82 223 IPR005175 -
Hepe05g1629 269 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 33 267 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Hepe05g1629 269 SUPERFAMILY AF0104/ALDC/Ptd012-like 83 210 - -
Hepe05g1629 269 Pfam Plants and Prokaryotes Conserved (PCC) domain 86 198 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0777 Hepe-Chr1:71302353 Hepe05g1629 Hepe-Chr5:66159109 1.34e-77 dispersed
Hepe02g3361 Hepe-Chr2:83180447 Hepe05g1629 Hepe-Chr5:66159109 4.30e-67 dispersed
Hepe05g1629 Hepe-Chr5:66159109 Hepe08g2445 Hepe-Chr8:65405116 2.58e-75 dispersed
Hepe03g0262 Hepe-Chr3:3441073 Hepe05g1629 Hepe-Chr5:66159109 1.21e-81 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1629 - - - 0.0