Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1755 ATGGGTAGCGGAGAAAAGGTCTTCACCTTGAAGGAAGTTGCTGAGCACAACAATCAAAAGGACTGTTGGCTCATCATCAGTGGCAAGGTATATGATGTGACCAAATTCTTAGAAGACCATCCAGGTGGTGATGATGTTTTGTTATCAGCTACAGGAAAAGATGCAACCGACGATTTCGAAGATGTGGGGCACAGTGACAATGCAAGAGATATGATGGATCAATACTATGTTGGGGAGATTGATGCTTCAACAATTCCAAAGAAGGTCGCATACACACCGCCAAAACAGCCTCATTACAATCAGGACAAGACATCCGAGTTCATCATCAAGCTTCTCCAATTCCTCGTCCCACTTGCGATTTTAGGATTGGCAGTCGCCATACGCTTCTACACGAAACAAGCTTGA 405 44.44 MGSGEKVFTLKEVAEHNNQKDCWLIISGKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDVGHSDNARDMMDQYYVGEIDASTIPKKVAYTPPKQPHYNQDKTSEFIIKLLQFLVPLAILGLAVAIRFYTKQA 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 67866386 67868988 - Hsped.05g17550.1 Hepe05g1755 571020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1755 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Hepe05g1755 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Hepe05g1755 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Hepe05g1755 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Hepe05g1755 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Hepe05g1755 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 6 90 IPR036400 -
Hepe05g1755 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Hepe05g1755 134 FunFam Cytochrome b5 type B 3 85 - -
Hepe05g1755 134 Gene3D - 2 86 IPR036400 -
Hepe05g1755 134 SMART Cyt_b5_2 8 81 IPR001199 -
Hepe05g1755 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Hepe05g1755 134 PANTHER CYTOCHROME B5 5 131 IPR050668 GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0605 Hepe-Chr3:12099595 Hepe05g1755 Hepe-Chr5:67866386 1.42e-10 dispersed
Hepe03g0793 Hepe-Chr3:25364047 Hepe05g1755 Hepe-Chr5:67866386 9.55e-40 dispersed
Hepe05g1755 Hepe-Chr5:67866386 Hepe06g0817 Hepe-Chr6:54970997 2.29e-64 dispersed
Hepe10g0572 Hepe-Chr10:6854369 Hepe05g1755 Hepe-Chr5:67866386 5.00e-35 transposed
Hepe03g0349 Hepe-Chr3:5042167 Hepe05g1755 Hepe-Chr5:67866386 2.34e-74 wgd
Hepe05g1755 Hepe-Chr5:67866386 Hepe06g1849 Hepe-Chr6:69606242 1.43e-65 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1755 K23490 - csv:101214209 271.166