Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1763 ATGGCTTGTGAAGCTATACAACTGTGGACATTTAATGGATTAGTGGCTGCATTTCTTGATCTTGGTATAGCTTATCTTTTACTATGTGCTTCGAGTCTTGTTTTCTTTACATCCAAGTTTCTTGCACTGTTTGGATTATGTCTGCCTTGCCCTTGTGATGGGCTATTTGGGAACCTTAGTAGTGATCACTGCTTCCAAAAGTTACTAGTGGATCGCTCGTCGAAAAAAATATCCTCAGTTCTACATTCGGCTAGAGAAAAGTCCCCATTGAATTCAATGTGGGATCGAGAGCCAAAAGGTTGTTTTAAGTCGATGATGGTGCACGAGAGGAATGCCAAGGATGCACATGTTGAATTGGAAGGTGAAGCATTGGGTAGTTCCGTTTTTAAAACCAGATCACCAGAAGGGATGATTTATGGAGACTTTCCCGGTGTAAAAGAATCGCGTCGTAAAAGCGGTGTGGGTCACCGGAAAGTCGTATCGGTATCTCCGAATGACCTCTTACAGTCGGATGTGGAAGACCTTTCTCGGTTTCCTTCAAGCTTCGATGGATTTGGGGATAATAATACCGAGGATGACTTCTTTTCTGTTGATTCTGGAGATGAAAGGGAGGCTTCATCAGACAACAGCGATCAATATAAAGTATTTCCTGATCTTGAACTAGATGATTCTTATGATGAGAAAATATGCGCAGAGATGTATGAACCATCTGTTGAAGAGGCTGGGAACAACTGCAGAGAGGAGTTGTGCTTTGATGGTAATGAGAGTGATACAATCAAACTATTGGAACAAGCACTTGAAGAAGAGCAGACAGCTCGTGCTACCCTGTACCTGGATCTCGAGAAAGAGAGAAGTGCTGCTGCCTCTGCTGCTGATGAGGCCATGGCTATGATATTACGTCTTCAGGAGGAGAAGGCATCAATAGAAATGGATGCTAGGCAATACCAGAGGATGATAGAGGAGAAAACTGCTTATGATGCTGAGGAAATGAGTATTCTTAAAGAAATTCTAGTGAGGAGAGAGCGGGAAATGCATTTCCTGGAGAAGGAAATTGAAGCTTTTCAGAAAAGTTTCTTTGAAGATGACCAAGTGGATGTTGATATGCTTGGCTCGGAAGTTACACCCCAAAGGGCCCCTTCTTTCCCATATTCAACTGAAGATCCATCTCATATGCTTCAATGCATTAATAAATCTATTAGAGACAAGCAAGATGCAAATTACACAAAACATTCTTCACAATATGAGATCCCATCGATGGAGTCACAAATTTTAACTTTTGAATTTGAGGAAGAGTCGCCATTTATACAAGCGGATGAACTTGCCACCGATGCTGCAAAAGCCGGGGGCATGTTGTTGCACCAACTTGCTGATAACTTCAAGGGCAGTGAAGAGATTGACAATGAGTTGCAAGAAAGGGGCATGGTAGAAGATGAGAATTTATACATTTTACCAGGAGAAGTAAATGAACTGGACCCATATCTGCAAAGCAATGAGTCAAATGGTCTAGGTAAGGTTGAGAAATGCACGGAATCGATTGCAGATAAACAAGAAAAGGTCGACGAAGTTTCATATGACGGGTTGGCATTGGCTAAAACAATCCTTCCCTGTGTTGAGTACAATTTGGAAAAGAATTGTGACCATCAACAGCAGTGGACAAGAGATCTCGACTCTGTGACTGATATAGACCCCCATCCTCACGATATTCATGTCATTGAAAAGGAAGCTAGCATGCGTGATGAAGCGAATGCTGGTGCAAGTAAAGAACCGGTGGCTAATGGCACCTCAAATATTCCAGTAAAATGTGATAGTCCATGTCCATCCTTCAGCTTGTTGGAGAGTGAACTAGACATCACAAGAAGCAGCTCAGATGCCACTGGTAGATTTCCACCAATGGCTCGTTCTCGAAGCAATTGCTTGCGTAGAAATTCAATGTCTGCTGTCGATTATGAAAGGTCAAAAATTGGCAATGAAGTTGAGTGGCTCAGAGAAAGGTTGAAGACTGTTCAGGAGGGAAGAGAAAAACTCAAGTTCTCCGTGGAACACAAAGAGAAGGAGAACAATCAGTTGCAAACTTTAGAAAACATAACAAATCACCTTCGTGGGATCCGACGACTGATAGATCCTGGAAAGGCAACTCTGCAGGCTCCATTGCCTCCATCCTCTAAGGCCGTGTCGAAGAAACATTGCTGGCGAAGTTCATCTTTAAGCATCCACAGAAGCAGCTAG 2226 42.77 MACEAIQLWTFNGLVAAFLDLGIAYLLLCASSLVFFTSKFLALFGLCLPCPCDGLFGNLSSDHCFQKLLVDRSSKKISSVLHSAREKSPLNSMWDREPKGCFKSMMVHERNAKDAHVELEGEALGSSVFKTRSPEGMIYGDFPGVKESRRKSGVGHRKVVSVSPNDLLQSDVEDLSRFPSSFDGFGDNNTEDDFFSVDSGDEREASSDNSDQYKVFPDLELDDSYDEKICAEMYEPSVEEAGNNCREELCFDGNESDTIKLLEQALEEEQTARATLYLDLEKERSAAASAADEAMAMILRLQEEKASIEMDARQYQRMIEEKTAYDAEEMSILKEILVRREREMHFLEKEIEAFQKSFFEDDQVDVDMLGSEVTPQRAPSFPYSTEDPSHMLQCINKSIRDKQDANYTKHSSQYEIPSMESQILTFEFEEESPFIQADELATDAAKAGGMLLHQLADNFKGSEEIDNELQERGMVEDENLYILPGEVNELDPYLQSNESNGLGKVEKCTESIADKQEKVDEVSYDGLALAKTILPCVEYNLEKNCDHQQQWTRDLDSVTDIDPHPHDIHVIEKEASMRDEANAGASKEPVANGTSNIPVKCDSPCPSFSLLESELDITRSSSDATGRFPPMARSRSNCLRRNSMSAVDYERSKIGNEVEWLRERLKTVQEGREKLKFSVEHKEKENNQLQTLENITNHLRGIRRLIDPGKATLQAPLPPSSKAVSKKHCWRSSSLSIHRSS 741
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 67934382 67938833 + Hsped.05g17630.1 Hepe05g1763 571028

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1763 741 PANTHER BNAANNG28530D PROTEIN 246 722 - -
Hepe05g1763 741 Coils Coil 291 318 - -
Hepe05g1763 741 ProSiteProfiles GTD-binding domain profile. 257 355 IPR007656 -
Hepe05g1763 741 Coils Coil 337 357 - -
Hepe05g1763 741 MobiDBLite consensus disorder prediction 189 212 - -
Hepe05g1763 741 Pfam Zein-binding 262 351 IPR007656 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1763 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1288 Hepe-Chr3:68528161 Hepe05g1763 Hepe-Chr5:67934382 4.23e-43 dispersed
Hepe05g1763 Hepe-Chr5:67934382 Hepe09g0557 Hepe-Chr9:5246188 2.64e-12 dispersed
Hepe05g1763 Hepe-Chr5:67934382 Hepe08g2425 Hepe-Chr8:64977216 4.97e-11 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g900 . . . . . . . . . . . Cma14g01896 . Car14g01698 Sed02g1501 Cpe08g00399 Cpe03g01595 Bhi01g00229 Tan10g0517 Cmetu06g0717 . Hepe05g1763 . Lcy11g1777 . . . . . . . . . . . Lsi05g01844 . . Cme06g00379 . . . . . . . Bma06g01282 . Cmo06g01251 Cmo14g01948 . . . . . . . . . . . . . . . . . . . . . Csa03g01093 Chy06g00362 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006891 1 2 1 1 1 1 0 1 1 1 1 1 2 0 1 2 1 1 2 1 1 1 1 1 1 1 0 8 1 0 37