Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1769 ATGGGGAAAGCCGACAACATCCTCCAAACTCTCGGAGACTTCACCAGCAAAGAGAATTGGGACAGTTTCTTCACCATCCGCGGCCATGGCGATGCTTTCGAGTGGTATTCCGAGTGGCCTCAGCTCAAAGAACCACTCATTTCTCACCTTCCCACCCTCTCCCTCTCCCTCTCCCAATCCCCATCTCCTCAGATTCTCGTTCCTGGTTGCGGCAACTCCAATCTCTCCGAGCACCTCTACGACGCCGGCTTTCGATGCATCACCAACATCGACTTCTCTAAAGTTGCAATCTCCGATATGCTGCGCCGGAACGTCAGGGATCGCCCCGATATGCGGTGGCGCGTCATGGATATGACGACCATGCAGTTCACGAATGATGCGTTTGATGCTGTCGTCGATAAAGGTGGATTGGATGCTTTAATGGAGCCAGAAGTTGGTTCTAAGCTGGGAAGTCAATACTTATCTGAGGTGAAAAGAGTTCTAAAACCAGGAGGAAAGTTCATCTGTCTTACATTAGCAGAATCTCATGTTCTAGGTTTGCTTTTTCCCAAGTTCCGTTTTGGATGGAAAATGAGTATTCATGTCATACCTCAAAAACCACCCTGTAAGCCTAATTTTCAAACCTTTATGGTGGTGGTGGAGAAAGATGATTCTACTACATGGCACCAGATAGAATCTTCTTTAAATTTCTCTTTGCTTGATTCCCGTGGAAATCAGACTCGTGAACTTGTCCAAACTCTTGAGAATGAGAATAGAATTCGCCAAAAGTATTCTAGCGGTGCTGATTTATTGTTCTCTCTCGAAGACCTGCAACTTGGAGCAAAGGGAGATCTGCAGAAGCTTCACCAAGGCCGCCGGGTTCAATTTACTTTAGGTGGACAAGGGACCTCCGTTTTCAGTTACAGAGCTGTCCTTCTTGATGCTCGGGAACAGTCTGGCCCATTCTTGTACGAATGCGGAGTTTTTATAGTGCCTAAGACTCGAGCTCATGAATGGCTGTTCTCTTCAGAAGAAGGTCAGTGGATGGTCGTTGAAAGCTCAAAAGCAGCTCGCCTTATAATGGTTCTATTAGATGAGACGCAATCTGGTGCCAACATGGATGCTATTCAGAAAGATTTGTCTCCCCTAGTTAAACAATTGGCACCTGGAGAAGATGACAGTGGATCTCAAATTCCATTTATGATGGCAAGTGATGGGATCAAGGAACGCAATTGTGTTTTCCAGGGTACATCTTCACTAACTGGTTCAATAGTTGTTGAAGATGTAATATATGAACATGCAAGTGATGATGCCAGCCGCATCTTCCCATCTGAAGATTTGATATTCCGTCGCCTTATTTTCCAAAGAGCGGAGAGTTTGGTGCAGTCTGAAGCTTTGTTGACAAGGGAAAGACTTCATGAGAAAGTTTCTAGTCAGGTGGACAGGAAAAAGTCTCATTCATCCAAATCAAAAAATAAAGGAAAGAAGATTCTGAATAAGGAGTCTAGTGACCAAATGAAGGTTTATCATGGCTATCTGGCAAGTTCTTATCATTCGGGGATCATTTCTGGGTTTATGTTGATATCTCGATATTTGGAGAGTGTAGCATCAGCTGGAACAACGGTGAACACAGTTGTCATTGGTCTTGGAGCAGGTTTACTGCCCATGTTCCTCCGCGCATGCATGTGTTTTTTACACATTGAGGTGGTCGAGTTGGATTCAAAGATCCTCAATCTTGCAAGGGACTACTTCGATTTTGCTGAGGATGCCGATTTGATGGTTCATATTGCTGATGGGATTCAGTTTGTTAGAGAATTCAGAAATCCTGGGACAAATGATTCATCAACCATTGTTCTTAACAATGGAAACTCTTCTCAAGTAGAACAGCGAGGAGACAAGAAGATTGACATACTTATCATTGACGTGGATGCAACAGACTCAAGCTCTGGAATGACCTGCCCAGCGGCTGATTTTGTAGAAGAGCCATTTCTTCTGGCAGTGAAAGGCGCCCTCTCCGAGCAGGGTCTTTTTATTGTAAACTTAGTCACACGATCTCCAACCGTTAACGATATGGTCGTCTCGAGGATGAAAGAAGTCTTTAATCACCTCTTTTCCCTTCAACTTGAGGAAGATGTAAATGAAGTGCTGTTTGCTCTTCCTTCAGAGTTTTGTGTAAAGGAGGATCTCTTCAATGAAGCAGCTCTTCAACTTGAGAAACTTTTAAATCTGAAACATCCAGAAATGAGGCAGAACATAGTTGATGCTACAAAGAAAATCAGATGTTTGAAGTAG 2271 43.99 MGKADNILQTLGDFTSKENWDSFFTIRGHGDAFEWYSEWPQLKEPLISHLPTLSLSLSQSPSPQILVPGCGNSNLSEHLYDAGFRCITNIDFSKVAISDMLRRNVRDRPDMRWRVMDMTTMQFTNDAFDAVVDKGGLDALMEPEVGSKLGSQYLSEVKRVLKPGGKFICLTLAESHVLGLLFPKFRFGWKMSIHVIPQKPPCKPNFQTFMVVVEKDDSTTWHQIESSLNFSLLDSRGNQTRELVQTLENENRIRQKYSSGADLLFSLEDLQLGAKGDLQKLHQGRRVQFTLGGQGTSVFSYRAVLLDAREQSGPFLYECGVFIVPKTRAHEWLFSSEEGQWMVVESSKAARLIMVLLDETQSGANMDAIQKDLSPLVKQLAPGEDDSGSQIPFMMASDGIKERNCVFQGTSSLTGSIVVEDVIYEHASDDASRIFPSEDLIFRRLIFQRAESLVQSEALLTRERLHEKVSSQVDRKKSHSSKSKNKGKKILNKESSDQMKVYHGYLASSYHSGIISGFMLISRYLESVASAGTTVNTVVIGLGAGLLPMFLRACMCFLHIEVVELDSKILNLARDYFDFAEDADLMVHIADGIQFVREFRNPGTNDSSTIVLNNGNSSQVEQRGDKKIDILIIDVDATDSSSGMTCPAADFVEEPFLLAVKGALSEQGLFIVNLVTRSPTVNDMVVSRMKEVFNHLFSLQLEEDVNEVLFALPSEFCVKEDLFNEAALQLEKLLNLKHPEMRQNIVDATKKIRCLK 756
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 67993731 68002461 + Hsped.05g17690.1 Hepe05g1769 571034

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1769 756 MobiDBLite consensus disorder prediction 470 489 - -
Hepe05g1769 756 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 15 173 IPR029063 -
Hepe05g1769 756 CDD AdoMet_MTases 65 169 - -
Hepe05g1769 756 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 501 679 IPR051419 -
Hepe05g1769 756 FunFam S-adenosyl-L-methionine-dependent methyltransferase superfamily protein 486 736 - -
Hepe05g1769 756 Pfam Methyltransferase domain 68 169 IPR013216 GO:0008757(InterPro)
Hepe05g1769 756 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 536 722 IPR029063 -
Hepe05g1769 756 Gene3D Vaccinia Virus protein VP39 12 231 IPR029063 -
Hepe05g1769 756 FunFam Methyltransferase-like protein 13 12 227 - -
Hepe05g1769 756 Gene3D Vaccinia Virus protein VP39 480 747 IPR029063 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1769 K25166 - - csv:101211869 1290.02
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0383 Hepe-Chr3:5523575 Hepe05g1769 Hepe-Chr5:67993731 5.04e-54 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g950 . . Bda03g01134 . Bpe04g01077 . . . . . . . . . Sed02g1516 Cpe08g00405 . Bhi01g00216 Tan10g0506 Cmetu06g0645 Lac12g2024 Hepe05g1769 . Lcy11g1784 . . . . . . . . Cone15ag0259 . . Lsi05g01851 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010449 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 2 32