Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe05g1827 | ATGGAGACAGGTTGGGTCGTGGCGGCGGCAGTGACGGCGGTGGCGGCCGTAGTTACGGGGTTTGCGGCGGTGAAATGGGTGGTGAAGAGTTTGAATGAATGGATATATGAGGCAAAATTAGGAGACCGGCGGCTGGCTTTGCCGCCGGGGGATTTGGGATGGCCTTTTATTGGAAATATGTTGGCTTTTTTTAAAGCCTTCAAATCTAATAACCCTGAAACATTCATTGATGACTATGTTGCAAGGTTTGGAAAAACCGGAATCTACAAGGCTCATTTGTTTGGATACCCTAGCGTGGTCGTGACGACGCCGGAGACATGCCGGAAAGCTTTGACAGACGACGAAGCCTTCCAGCCCGGTTGGCCACGCGCCACCGTAGATCTCATCGGAAGGAAGTCCTTCATCACAATGGCGGTCGACGAACACAAGCGCCTCCGCCGCTTAACCTCTGCTCCGGTGAACGGCTTCGAGGCGCTGAGCAATTACATTCCTTACATCGAACAGAATATCTTGGTATCGTTGGAGAAATGGTCGAAAATGGGGCCAATCGTATACTTAACTCAACTTCGCAAGCTCACTTTCACCCTTATCATGTACATTTTCCTCAGCACAGAGAGCGTAGCGGTGATGGAGGAGTTGGAGAAGGAGTACACTCAGCTTAACCATGGTATTCGAGCTATGAGAGTTAACCTACCTGGATTTGCTTACTACAAAGCACTCAAGGCTCGGAAGAAGCTTGTGGCTTCGTTGCAAGGAATTGTGAGTGAACGAAGACGCCAAAAATTGAACAAAACTGGGCCGAAGAGGAAGGATATGATGGATTCTCTGATTGATCTTGAAGATGAAAATGGCAGAAAATTGACCGACGAGGAGATCATTGATATTCTATTAATGTACTTGAATGCTGGACATGAATCTTCAGGCCATACTATGATGTGGTCAACTATTTTGTTGAGTCAACATCCAGAAGCTCTCAAGCTAGCCAAGGCAGAGCAGGAGGAGATTGTGAGGAGGAGGCCTGCAGGTCAAAAGGGATTGACATTGAAAGAATGCCGTGATATGAAATACCTCGACAAAGTGGTCGATGAGACTCTTCGCTATGTATCATTCGCCCCTCTTGTTTTCAGAGAGGCACAAATGGATGTCAACCTCAATGGTTATCTAATCCCCAAGGGTTGGAAAGTGTTGCCTTGGTTCAGAAGCGTTCACTTCAACAGTGAAGTTTACCCAAATCCAAAGAAATTTGATCCTTCAAGATGGGATGGATTCGTCCCAAAAGCAGGAGAGTTTCTTCCATTTGGAGCAGGAAGCAGGCTGTGTCCAGGAAATGATCTAGCCAAATTGGAGATCTCCATTTACGTCCACTATTTTCTTCTCAACTACAAGCTTGAATGGCTGACTCCCGACTGTCAAATCTTGTATCTGCCGCATTCGAGGCCAAAGGACAATTGCATCGCTCAAATCAGTAAGAAATAG | 1476 | 46.88 | METGWVVAAAVTAVAAVVTGFAAVKWVVKSLNEWIYEAKLGDRRLALPPGDLGWPFIGNMLAFFKAFKSNNPETFIDDYVARFGKTGIYKAHLFGYPSVVVTTPETCRKALTDDEAFQPGWPRATVDLIGRKSFITMAVDEHKRLRRLTSAPVNGFEALSNYIPYIEQNILVSLEKWSKMGPIVYLTQLRKLTFTLIMYIFLSTESVAVMEELEKEYTQLNHGIRAMRVNLPGFAYYKALKARKKLVASLQGIVSERRRQKLNKTGPKRKDMMDSLIDLEDENGRKLTDEEIIDILLMYLNAGHESSGHTMMWSTILLSQHPEALKLAKAEQEEIVRRRPAGQKGLTLKECRDMKYLDKVVDETLRYVSFAPLVFREAQMDVNLNGYLIPKGWKVLPWFRSVHFNSEVYPNPKKFDPSRWDGFVPKAGEFLPFGAGSRLCPGNDLAKLEISIYVHYFLLNYKLEWLTPDCQILYLPHSRPKDNCIAQISKK | 491 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 68584438 | 68588978 | + | Hsped.05g18270.1 | Hepe05g1827 | 571092 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe05g1827 | 491 | Gene3D | Cytochrome P450 | 38 | 490 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g1827 | 491 | Coils | Coil | 210 | 230 | - | - | |
| Hepe05g1827 | 491 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 433 | 442 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Hepe05g1827 | 491 | FunFam | Ent-kaurenoic acid oxidase | 38 | 491 | - | - | |
| Hepe05g1827 | 491 | Pfam | Cytochrome P450 | 48 | 465 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g1827 | 491 | CDD | CYP90-like | 80 | 490 | - | - | |
| Hepe05g1827 | 491 | PANTHER | CYTOCHROME P450 26 | 46 | 466 | - | GO:0004497(PANTHER)|GO:0005783(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0051777(PANTHER) | |
| Hepe05g1827 | 491 | PRINTS | E-class P450 group I signature | 430 | 440 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g1827 | 491 | PRINTS | E-class P450 group I signature | 311 | 337 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g1827 | 491 | PRINTS | E-class P450 group I signature | 398 | 422 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g1827 | 491 | PRINTS | E-class P450 group I signature | 440 | 463 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g1827 | 491 | PRINTS | E-class P450 group I signature | 358 | 376 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g1827 | 491 | PRINTS | P450 superfamily signature | 302 | 319 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g1827 | 491 | PRINTS | P450 superfamily signature | 440 | 451 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g1827 | 491 | PRINTS | P450 superfamily signature | 359 | 370 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g1827 | 491 | PRINTS | P450 superfamily signature | 431 | 440 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g1827 | 491 | SUPERFAMILY | Cytochrome P450 | 43 | 488 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe05g1827 | Hepe-Chr5:68584438 | Hepe06g1752 | Hepe-Chr6:68591931 | 9.30e-147 | dispersed | |
| Hepe05g1827 | Hepe-Chr5:68584438 | Hepe05g1828 | Hepe-Chr5:68615588 | 0.0 | tandem | |
| Hepe03g0420 | Hepe-Chr3:6223239 | Hepe05g1827 | Hepe-Chr5:68584438 | 4.65e-236 | wgd | |
| Hepe05g1827 | Hepe-Chr5:68584438 | Hepe06g1750 | Hepe-Chr6:68563910 | 2.39e-130 | wgd | |
| Hepe05g1827 | Hepe-Chr5:68584438 | Hepe06g1047 | Hepe-Chr6:58654627 | 1.10e-149 | wgd | |
| Hepe05g1827 | Hepe-Chr5:68584438 | Hepe08g2561 | Hepe-Chr8:67226398 | 2.72e-17 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe05g1827 | K04123 | - | csv:101221667 | 825.854 |