Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe05g1836 | ATGGCTGGCTTAGACTTGGGCTCTGCTTCTCACTTTATCAATCAACTTCACCACCGTTCCGTCGATCTCCACCTCCAGCGGCCGACGGATGGCGACGAGGGTTCCGACGAGTTCCACGGCGGCGATGACGACCACAACAACCCTCACCGCCTGAACTCCGGCGGCGAAATCGTGGGACGGCGGCCGAGAGGCCGACCGGCTGGTTCCAAAAATAAACCCAAGCCACCCGTGATTATTACCAGGGAAAGCGCCAACACCCTTCGAGCTCACATCCTTGAAGTCAACTCCGGTTGCGATGTCTTTGACTCGGTCGCCACGTATGCTCGTAAGCGCCAACGCGGGATCTGCATCTTGAACGGCACCGGCGCGGTTATTAACGTCACTTTGCGGCAACCCGCGTCGGCCGGTGCCGTTATGACGCTCCACGGCAGATTTGAGATATTGTCTCTGACGGGATCGTTCTTGCCGCCTCCGGCTCCTCCGGGAGCTACGAGTTTGACTATTTTTCTTGCCGGTGGGCAAGGGCAGATCGTCGGAGGGAATGTTGTTGGCTCTTTGATTGCTTCGGGACCGGTGACCGTCATAGCTTCTTCGTTTACCAATGTTGCCTACGAGAGGCTGCCGTTGGACGAGGAGGAACCGTCCAACGGTGGTGGTAGCGGTGGTGGAGGGAGCCTTAGCAACCCGTTTCCGGAGCAGTCAGCCGGGTTGCCGTTCTTTAATCTGCCGTTGAACATGCCGGGGAATCAAAATCAGCTGCCGGAGGATGGATGGGGCGGAGGGAACTCCGGTGGGAGAGCATCTTATTGA | 810 | 58.02 | MAGLDLGSASHFINQLHHRSVDLHLQRPTDGDEGSDEFHGGDDDHNNPHRLNSGGEIVGRRPRGRPAGSKNKPKPPVIITRESANTLRAHILEVNSGCDVFDSVATYARKRQRGICILNGTGAVINVTLRQPASAGAVMTLHGRFEILSLTGSFLPPPAPPGATSLTIFLAGGQGQIVGGNVVGSLIASGPVTVIASSFTNVAYERLPLDEEEPSNGGGSGGGGSLSNPFPEQSAGLPFFNLPLNMPGNQNQLPEDGWGGGNSGGRASY | 269 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 68663914 | 68664880 | - | Hsped.05g18360.1 | Hepe05g1836 | 571101 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe05g1836 | 269 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 88 | 200 | IPR005175 | - | |
Hepe05g1836 | 269 | MobiDBLite | consensus disorder prediction | 220 | 234 | - | - | |
Hepe05g1836 | 269 | CDD | DUF296 | 88 | 199 | IPR005175 | - | |
Hepe05g1836 | 269 | ProSiteProfiles | PPC domain profile profile. | 84 | 221 | IPR005175 | - | |
Hepe05g1836 | 269 | FunFam | AT-hook motif nuclear-localized protein | 87 | 214 | - | - | |
Hepe05g1836 | 269 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 84 | 212 | - | - | |
Hepe05g1836 | 269 | MobiDBLite | consensus disorder prediction | 210 | 269 | - | - | |
Hepe05g1836 | 269 | MobiDBLite | consensus disorder prediction | 23 | 50 | - | - | |
Hepe05g1836 | 269 | Gene3D | - | 87 | 215 | - | - | |
Hepe05g1836 | 269 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 41 | 222 | IPR014476 | GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Hepe05g1836 | 269 | MobiDBLite | consensus disorder prediction | 23 | 77 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe05g1836 | Hepe-Chr5:68663914 | Hepe06g1033 | Hepe-Chr6:58384151 | 2.33e-98 | dispersed | |
Hepe03g0422 | Hepe-Chr3:6308804 | Hepe05g1836 | Hepe-Chr5:68663914 | 4.00e-107 | wgd | |
Hepe05g1836 | Hepe-Chr5:68663914 | Hepe06g1763 | Hepe-Chr6:68737986 | 1.25e-95 | wgd | |
Hepe05g1836 | Hepe-Chr5:68663914 | Hepe06g1032 | Hepe-Chr6:58368338 | 2.96e-16 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe05g1836 | - | - | - | 0.0 |