Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1836 ATGGCTGGCTTAGACTTGGGCTCTGCTTCTCACTTTATCAATCAACTTCACCACCGTTCCGTCGATCTCCACCTCCAGCGGCCGACGGATGGCGACGAGGGTTCCGACGAGTTCCACGGCGGCGATGACGACCACAACAACCCTCACCGCCTGAACTCCGGCGGCGAAATCGTGGGACGGCGGCCGAGAGGCCGACCGGCTGGTTCCAAAAATAAACCCAAGCCACCCGTGATTATTACCAGGGAAAGCGCCAACACCCTTCGAGCTCACATCCTTGAAGTCAACTCCGGTTGCGATGTCTTTGACTCGGTCGCCACGTATGCTCGTAAGCGCCAACGCGGGATCTGCATCTTGAACGGCACCGGCGCGGTTATTAACGTCACTTTGCGGCAACCCGCGTCGGCCGGTGCCGTTATGACGCTCCACGGCAGATTTGAGATATTGTCTCTGACGGGATCGTTCTTGCCGCCTCCGGCTCCTCCGGGAGCTACGAGTTTGACTATTTTTCTTGCCGGTGGGCAAGGGCAGATCGTCGGAGGGAATGTTGTTGGCTCTTTGATTGCTTCGGGACCGGTGACCGTCATAGCTTCTTCGTTTACCAATGTTGCCTACGAGAGGCTGCCGTTGGACGAGGAGGAACCGTCCAACGGTGGTGGTAGCGGTGGTGGAGGGAGCCTTAGCAACCCGTTTCCGGAGCAGTCAGCCGGGTTGCCGTTCTTTAATCTGCCGTTGAACATGCCGGGGAATCAAAATCAGCTGCCGGAGGATGGATGGGGCGGAGGGAACTCCGGTGGGAGAGCATCTTATTGA 810 58.02 MAGLDLGSASHFINQLHHRSVDLHLQRPTDGDEGSDEFHGGDDDHNNPHRLNSGGEIVGRRPRGRPAGSKNKPKPPVIITRESANTLRAHILEVNSGCDVFDSVATYARKRQRGICILNGTGAVINVTLRQPASAGAVMTLHGRFEILSLTGSFLPPPAPPGATSLTIFLAGGQGQIVGGNVVGSLIASGPVTVIASSFTNVAYERLPLDEEEPSNGGGSGGGGSLSNPFPEQSAGLPFFNLPLNMPGNQNQLPEDGWGGGNSGGRASY 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 68663914 68664880 - Hsped.05g18360.1 Hepe05g1836 571101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1836 269 Pfam Plants and Prokaryotes Conserved (PCC) domain 88 200 IPR005175 -
Hepe05g1836 269 MobiDBLite consensus disorder prediction 220 234 - -
Hepe05g1836 269 CDD DUF296 88 199 IPR005175 -
Hepe05g1836 269 ProSiteProfiles PPC domain profile profile. 84 221 IPR005175 -
Hepe05g1836 269 FunFam AT-hook motif nuclear-localized protein 87 214 - -
Hepe05g1836 269 SUPERFAMILY AF0104/ALDC/Ptd012-like 84 212 - -
Hepe05g1836 269 MobiDBLite consensus disorder prediction 210 269 - -
Hepe05g1836 269 MobiDBLite consensus disorder prediction 23 50 - -
Hepe05g1836 269 Gene3D - 87 215 - -
Hepe05g1836 269 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 41 222 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Hepe05g1836 269 MobiDBLite consensus disorder prediction 23 77 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1836 Hepe-Chr5:68663914 Hepe06g1033 Hepe-Chr6:58384151 2.33e-98 dispersed
Hepe03g0422 Hepe-Chr3:6308804 Hepe05g1836 Hepe-Chr5:68663914 4.00e-107 wgd
Hepe05g1836 Hepe-Chr5:68663914 Hepe06g1763 Hepe-Chr6:68737986 1.25e-95 wgd
Hepe05g1836 Hepe-Chr5:68663914 Hepe06g1032 Hepe-Chr6:58368338 2.96e-16 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1836 - - - 0.0