Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1844 ATGGGAGAAGAAGAAGAAGAAGTGAAGGTAAAGCTATTCAGAACGTGGTCGAGTCCATTCGCTCTGAGAATAGTATGGGCGTTGAAATTGAAAGGGTTAGAATACGACACCGTTTTCGAAGATCTGACCGACAAGAGTTCGTTGCTTTTGGAGTACAATCCGATCCACAAGAAAGTTCCTGTGCTCGTCCATGGCGGGAAGCCGATCGCCGAATCGCTCGTGATTCTTGAATACATCGACCAAGTATGGAAGCAAAATTCATTGCTGCCTCAAGATCCTTACCAGAGAGCTGTTGCTCGCTTTTGGGCTAAATTTGGGGATGAAAAGGTTTTGGAATCTATAAAGAAAGTGTTTATGAACCAAGGGGAAGTGAAAGAGGAAGGTGTAGAAGAAGCCTTGGAGAATTTGAAGCATTTGGAAGAAGAGTTGAAGGGAAAGAGGTTCTTTGGAGGGGAGGCCATTGGGTTTGTGGATATTGCACTTGGTTGGCTTGCAAATTTAGTCAGTGTATTGGAGGAAGTGATTGAACTTGAACTGATAACTGAAGAAAAGTTTCCTCTCTTGTCTAAATGGACTAAGGAATTTGCTGCTGCTCCAATCATCAATGAAAACTGGCCACCTAGAGACAAGCTTGTCACCAAGTACCAAGCCATGCATCAAACTTTTATGACCAAACAACAAGCATAA 687 43.09 MGEEEEEVKVKLFRTWSSPFALRIVWALKLKGLEYDTVFEDLTDKSSLLLEYNPIHKKVPVLVHGGKPIAESLVILEYIDQVWKQNSLLPQDPYQRAVARFWAKFGDEKVLESIKKVFMNQGEVKEEGVEEALENLKHLEEELKGKRFFGGEAIGFVDIALGWLANLVSVLEEVIELELITEEKFPLLSKWTKEFAAAPIINENWPPRDKLVTKYQAMHQTFMTKQQA 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 68767235 68769909 + Hsped.05g18440.1 Hepe05g1844 571109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1844 228 CDD GST_N_Tau 12 83 - -
Hepe05g1844 228 Pfam Glutathione S-transferase, N-terminal domain 9 81 IPR004045 -
Hepe05g1844 228 SFLD Glutathione Transferase (cytosolic) 7 227 IPR040079 -
Hepe05g1844 228 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 8 87 IPR004045 -
Hepe05g1844 228 Pfam Glutathione S-transferase, C-terminal domain 121 199 IPR004046 -
Hepe05g1844 228 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 216 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Hepe05g1844 228 SFLD Main.3: Omega- and Tau-like 7 227 IPR045073 -
Hepe05g1844 228 Gene3D Glutaredoxin 3 88 - -
Hepe05g1844 228 FunFam Tau class glutathione S-transferase 3 91 - -
Hepe05g1844 228 CDD GST_C_Tau 93 212 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Hepe05g1844 228 Gene3D - 89 226 - -
Hepe05g1844 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 215 IPR010987 -
Hepe05g1844 228 FunFam Tau class glutathione S-transferase 89 225 - -
Hepe05g1844 228 Coils Coil 122 146 - -
Hepe05g1844 228 SUPERFAMILY Thioredoxin-like 9 109 IPR036249 -
Hepe05g1844 228 SUPERFAMILY GST C-terminal domain-like 81 222 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0806 Hepe-Chr4:62103373 Hepe05g1844 Hepe-Chr5:68767235 2.00e-66 dispersed
Hepe05g1844 Hepe-Chr5:68767235 Hepe09g0371 Hepe-Chr9:3298201 3.97e-74 dispersed
Hepe05g1844 Hepe-Chr5:68767235 Hepe07g1403 Hepe-Chr7:46400513 7.81e-29 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1844 K00799 - csv:101219529 372.859