Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1872 ATGGACTTCGAAGCTCAGCCTCAGCCTCAGAAAAGCTCCGACGATTCGTCGACGTCTTCGGAACTGGTTCTTTATTCTTTCTGGCAGAGCTCCTGCTCGTGGCGCGTTCGCTTTGCGTTGAACCTCAAAGGGCTTTCTTACGAGTACAGAGCAGTAAACCTTAGGAGAGGAGAACAATTAAGTCCAGATTTTGAGCGCCTAAATCCTCTTAAGTATGTTCCTGTATTAGTAGATGGTCATGTGGTAGTTTCAGACTCTTCCGCGATTTTGCTGTATTTGGAAGAGAAATATCCACAGAAGACGTTGCTGCCTGCTGATCTTCATTTAAAATCTCTTAATCTGCAAGTGGCAAATATCGTCAGCTCAAGCATACAACCTCTTATTATGATGGGATTGCTGAAAACTATCGAGGAAAAATTTGGTCGAGAAGAGCAACTACCATGGGCTCAGTCTAATATACAAAAAGGTTTCAATGCTCTTGAGAAACTGCTGAAGGATTTTTCTGGCCGATTTGCCTTGGGAGATGAAGTATATATGGCTGATGTATTTTTAGCCCCCCAAATTTCAATTGCTATTGAGAAGTTCGACATTGACATGCTCCCGTCTAGCTTAGTTGATAGAGTGCAAGACGCGCAGGTTTAA 642 43.15 MDFEAQPQPQKSSDDSSTSSELVLYSFWQSSCSWRVRFALNLKGLSYEYRAVNLRRGEQLSPDFERLNPLKYVPVLVDGHVVVSDSSAILLYLEEKYPQKTLLPADLHLKSLNLQVANIVSSSIQPLIMMGLLKTIEEKFGREEQLPWAQSNIQKGFNALEKLLKDFSGRFALGDEVYMADVFLAPQISIAIEKFDIDMLPSSLVDRVQDAQV 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 69014338 69023272 - Hsped.05g18720.1 Hepe05g1872 571137

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1872 213 SUPERFAMILY Thioredoxin-like 20 105 IPR036249 -
Hepe05g1872 213 SFLD Glutathione Transferase (cytosolic) 22 192 IPR040079 -
Hepe05g1872 213 Gene3D - 103 212 - -
Hepe05g1872 213 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 106 213 IPR010987 -
Hepe05g1872 213 CDD GST_N_Zeta 22 94 IPR034333 -
Hepe05g1872 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 20 101 IPR004045 -
Hepe05g1872 213 FunFam Glutathione S-transferase Z1 20 104 - -
Hepe05g1872 213 NCBIfam maleylacetoacetate isomerase 24 211 IPR005955 GO:0003824(InterPro)|GO:0005737(InterPro)|GO:0009072(InterPro)
Hepe05g1872 213 Gene3D Glutaredoxin 24 100 - -
Hepe05g1872 213 SFLD Main (cytGST) 22 192 - -
Hepe05g1872 213 Pfam Glutathione S-transferase, N-terminal domain 24 100 IPR004045 -
Hepe05g1872 213 Pfam Glutathione S-transferase, C-terminal domain 149 188 - -
Hepe05g1872 213 PANTHER MALEYLACETOACETATE ISOMERASE 20 210 - GO:0004364(PANTHER)|GO:0006559(PANTHER)|GO:0006749(PANTHER)|GO:0016034(PANTHER)
Hepe05g1872 213 SUPERFAMILY GST C-terminal domain-like 102 201 IPR036282 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1872 K01800 - - csv:101213403 310.842
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1872 Hepe-Chr5:69014338 Hepe08g1222 Hepe-Chr8:12819996 3.33e-78 dispersed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Hepe03g1913 . 1 209 Glutathione S-transferase Gene Family AT4G02520 58.0 8.4e-65 243.8
Hepe03g1912 . 1 209 Glutathione S-transferase Gene Family AT4G02520 58.0 3.2e-64 241.9
Hepe03g1912 . 1 210 Glutathione S-transferase Gene Family AT2G02930 59.2 8.4e-65 243.8
Hepe03g1913 . 1 210 Glutathione S-transferase Gene Family AT2G02930 57.7 1.9e-64 242.7
Hepe03g1913 . 5 206 Glutathione S-transferase Gene Family AT1G02950 55.7 3.2e-63 238.8
Hepe03g1912 . 5 206 Glutathione S-transferase Gene Family AT1G02950 54.2 1.2e-57 220.3
Hepe03g1912 . 1 210 Glutathione S-transferase Gene Family AT1G02930 58.6 1.1e-64 243.4
Hepe03g1913 . 1 210 Glutathione S-transferase Gene Family AT1G02930 54.3 2.2e-62 235.7
Hepe03g1912 . 1 210 Glutathione S-transferase Gene Family AT1G02920 59.5 7.5e-66 247.3
Hepe03g1913 . 1 210 Glutathione S-transferase Gene Family AT1G02920 55.2 1.2e-63 240.0
Hepe03g1913 . 1 213 Glutathione S-transferase Gene Family AT2G47730 57.5 1.1e-66 250.4
Hepe03g1912 . 1 213 Glutathione S-transferase Gene Family AT2G47730 58.4 9.4e-66 247.3
Hepe03g1914 . 33 191 Glutathione S-transferase Gene Family AT3G62760 64.2 3.2e-59 225.3
Hepe04g0798 . 4 214 Glutathione S-transferase Gene Family AT2G29420 50.2 1.4e-62 236.5
Hepe04g0799 . 2 206 Glutathione S-transferase Gene Family AT2G29420 51.2 2.3e-60 229.2
Hepe04g0807 . 401 609 Glutathione S-transferase Gene Family AT3G09270 56.7 4.7e-66 248.1
Hepe04g0798 . 3 215 Glutathione S-transferase Gene Family AT3G09270 53.5 9.8e-64 240.4
Hepe04g0799 . 3 208 Glutathione S-transferase Gene Family AT3G09270 54.1 3.7e-63 238.4
Hepe04g0805 . 3 213 Glutathione S-transferase Gene Family AT3G09270 53.3 1.2e-61 233.4
Hepe07g0916 . 1 217 Glutathione S-transferase Gene Family AT1G78380 68.2 3.1e-86 315.1
Hepe07g0920 . 9 221 Glutathione S-transferase Gene Family AT1G78380 68.1 2.1e-82 302.4
Hepe07g0921 . 1 203 Glutathione S-transferase Gene Family AT1G78380 65.0 9.2e-75 276.9
Hepe02g2416 . 5 222 Glutathione S-transferase Gene Family AT1G78380 54.1 1.1e-64 243.4
Hepe07g0919 . 5 216 Glutathione S-transferase Gene Family AT1G78380 52.8 2.9e-60 228.8
Hepe06g0180 . 212 315 Glutathione S-transferase Gene Family AT1G78380 73.1 5.7e-40 161.4
Hepe07g0920 . 14 221 Glutathione S-transferase Gene Family AT1G78370 63.9 1.7e-76 282.7
Hepe07g0916 . 7 215 Glutathione S-transferase Gene Family AT1G78370 60.8 1.1e-72 270.0
Hepe07g0921 . 1 203 Glutathione S-transferase Gene Family AT1G78370 64.0 4.0e-70 261.5
Hepe02g2416 . 8 221 Glutathione S-transferase Gene Family AT1G78370 52.3 1.2e-61 233.4
Hepe07g0916 . 1 217 Glutathione S-transferase Gene Family AT1G78340 63.1 8.0e-79 290.4
Hepe07g0920 . 9 221 Glutathione S-transferase Gene Family AT1G78340 60.1 4.6e-74 274.6
Hepe07g0921 . 2 204 Glutathione S-transferase Gene Family AT1G78340 60.1 2.6e-69 258.8
Hepe02g2416 . 5 220 Glutathione S-transferase Gene Family AT1G78340 52.3 3.1e-62 235.3
Hepe05g1844 . 9 161 Glutathione S-transferase Gene Family AT1G78340 50.6 5.6e-40 161.4
Hepe06g0180 . 212 315 Glutathione S-transferase Gene Family AT1G78340 68.3 1.4e-38 156.8
Hepe07g0916 . 1 215 Glutathione S-transferase Gene Family AT1G78320 50.2 1.1e-55 213.4
Hepe07g0920 . 9 225 Glutathione S-transferase Gene Family AT1G17180 65.4 7.1e-83 303.9
Hepe07g0916 . 1 220 Glutathione S-transferase Gene Family AT1G17180 61.4 1.5e-80 296.2
Hepe07g0921 . 1 208 Glutathione S-transferase Gene Family AT1G17180 63.9 1.3e-76 283.1
Hepe02g2416 . 5 225 Glutathione S-transferase Gene Family AT1G17180 52.5 1.8e-65 246.1
Hepe07g0919 . 5 223 Glutathione S-transferase Gene Family AT1G17180 50.5 4.5e-61 231.5
Hepe06g0180 . 212 318 Glutathione S-transferase Gene Family AT1G17180 67.3 1.8e-38 156.4
Hepe07g0920 . 7 224 Glutathione S-transferase Gene Family AT1G17190 59.6 5.4e-75 277.7
Hepe07g0916 . 2 218 Glutathione S-transferase Gene Family AT1G17190 56.7 5.6e-72 267.7
Hepe07g0921 . 1 206 Glutathione S-transferase Gene Family AT1G17190 56.8 1.6e-66 249.6
Hepe06g0180 . 210 315 Glutathione S-transferase Gene Family AT1G17190 67.9 3.4e-37 152.1
Hepe07g0916 . 3 215 Glutathione S-transferase Gene Family AT3G43800 57.9 6.4e-71 264.2
Hepe07g0920 . 7 221 Glutathione S-transferase Gene Family AT3G43800 53.9 9.6e-67 250.4
Hepe07g0921 . 1 204 Glutathione S-transferase Gene Family AT3G43800 54.8 1.2e-61 233.4
Hepe07g0916 . 1 220 Glutathione S-transferase Gene Family AT1G53680 55.1 1.0e-65 246.9
Hepe07g0921 . 2 208 Glutathione S-transferase Gene Family AT1G53680 56.3 6.8e-65 244.2
Hepe07g0920 . 11 225 Glutathione S-transferase Gene Family AT1G53680 54.8 3.7e-63 238.4
Hepe02g2416 . 6 225 Glutathione S-transferase Gene Family AT1G53680 54.1 6.4e-63 237.7
Hepe07g0919 . 6 223 Glutathione S-transferase Gene Family AT1G53680 50.9 8.0e-58 220.7
Hepe08g1222 . 51 221 Glutathione S-transferase Gene Family AT2G02390 66.1 4.6e-62 234.6
Hepe08g1220 . 49 215 Glutathione S-transferase Gene Family AT2G02390 67.1 5.6e-60 227.6
Hepe05g1872 . 63 201 Glutathione S-transferase Gene Family AT2G02390 52.5 1.4e-37 153.3
Hepe08g1222 . 10 220 Glutathione S-transferase Gene Family AT2G02380 64.0 2.6e-77 285.4
Hepe08g1220 . 8 214 Glutathione S-transferase Gene Family AT2G02380 62.3 8.8e-73 270.4
Hepe05g1872 . 20 201 Glutathione S-transferase Gene Family AT2G02380 52.7 5.6e-51 198.0
Hepe07g0758 . 1 237 Glutathione S-transferase Gene Family AT5G41210 68.8 5.5e-92 334.3
Hepe07g0758 . 1 237 Glutathione S-transferase Gene Family AT5G41240 67.5 1.0e-88 324.7
Hepe05g0219 . 13 232 Glutathione S-transferase Gene Family AT5G02780 67.6 1.7e-82 302.8
Hepe05g0218 . 1 203 Glutathione S-transferase Gene Family AT5G02780 68.6 3.0e-79 292.0
Hepe01g0865 . 75 294 Glutathione S-transferase Gene Family AT5G02780 64.9 1.9e-78 289.3
Hepe01g0865 . 53 299 Glutathione S-transferase Gene Family AT3G55040 63.7 4.5e-85 311.6
Hepe05g0219 . 3 230 Glutathione S-transferase Gene Family AT3G55040 56.3 3.2e-75 278.9
Hepe05g0218 . 1 201 Glutathione S-transferase Gene Family AT3G55040 63.2 4.0e-73 271.9
Hepe05g0219 . 7 232 Glutathione S-transferase Gene Family AT5G02790 68.3 2.3e-87 318.9
Hepe05g0218 . 2 203 Glutathione S-transferase Gene Family AT5G02790 72.8 1.1e-86 316.6
Hepe01g0865 . 67 294 Glutathione S-transferase Gene Family AT5G02790 63.3 2.9e-82 302.0
Hepe02g0994 . 59 266 Glutathione S-transferase Gene Family AT1G19570 58.9 3.2e-72 268.5
Hepe01g0844 . 1 98 Glutathione S-transferase Gene Family AT1G19570 75.5 8.5e-41 164.1
Hepe01g0842 . 1 101 Glutathione S-transferase Gene Family AT1G19570 73.5 4.2e-40 161.8
Hepe02g0994 . 59 266 Glutathione S-transferase Gene Family AT1G75270 61.7 9.0e-75 276.9
Hepe01g0844 . 1 98 Glutathione S-transferase Gene Family AT1G75270 80.6 1.8e-43 172.9
Hepe01g0842 . 1 101 Glutathione S-transferase Gene Family AT1G75270 75.5 8.5e-41 164.1
Hepe02g0994 . 48 268 Glutathione S-transferase Gene Family AT5G16710 76.0 8.0e-102 367.1
Hepe01g1586 . 1 267 Glutathione S-transferase Gene Family AT1G77290 69.3 1.6e-108 389.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000862 1 6 2 2 2 2 3 2 2 2 1 1 3 3 3 3 1 3 3 2 3 2 3 3 4 2 3 8 7 3 85