Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1872 ATGGACTTCGAAGCTCAGCCTCAGCCTCAGAAAAGCTCCGACGATTCGTCGACGTCTTCGGAACTGGTTCTTTATTCTTTCTGGCAGAGCTCCTGCTCGTGGCGCGTTCGCTTTGCGTTGAACCTCAAAGGGCTTTCTTACGAGTACAGAGCAGTAAACCTTAGGAGAGGAGAACAATTAAGTCCAGATTTTGAGCGCCTAAATCCTCTTAAGTATGTTCCTGTATTAGTAGATGGTCATGTGGTAGTTTCAGACTCTTCCGCGATTTTGCTGTATTTGGAAGAGAAATATCCACAGAAGACGTTGCTGCCTGCTGATCTTCATTTAAAATCTCTTAATCTGCAAGTGGCAAATATCGTCAGCTCAAGCATACAACCTCTTATTATGATGGGATTGCTGAAAACTATCGAGGAAAAATTTGGTCGAGAAGAGCAACTACCATGGGCTCAGTCTAATATACAAAAAGGTTTCAATGCTCTTGAGAAACTGCTGAAGGATTTTTCTGGCCGATTTGCCTTGGGAGATGAAGTATATATGGCTGATGTATTTTTAGCCCCCCAAATTTCAATTGCTATTGAGAAGTTCGACATTGACATGCTCCCGTCTAGCTTAGTTGATAGAGTGCAAGACGCGCAGGTTTAA 642 43.15 MDFEAQPQPQKSSDDSSTSSELVLYSFWQSSCSWRVRFALNLKGLSYEYRAVNLRRGEQLSPDFERLNPLKYVPVLVDGHVVVSDSSAILLYLEEKYPQKTLLPADLHLKSLNLQVANIVSSSIQPLIMMGLLKTIEEKFGREEQLPWAQSNIQKGFNALEKLLKDFSGRFALGDEVYMADVFLAPQISIAIEKFDIDMLPSSLVDRVQDAQV 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 69014338 69023272 - Hsped.05g18720.1 Hepe05g1872 571137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1872 213 SUPERFAMILY Thioredoxin-like 20 105 IPR036249 -
Hepe05g1872 213 SFLD Glutathione Transferase (cytosolic) 22 192 IPR040079 -
Hepe05g1872 213 Gene3D - 103 212 - -
Hepe05g1872 213 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 106 213 IPR010987 -
Hepe05g1872 213 CDD GST_N_Zeta 22 94 IPR034333 -
Hepe05g1872 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 20 101 IPR004045 -
Hepe05g1872 213 FunFam Glutathione S-transferase Z1 20 104 - -
Hepe05g1872 213 NCBIfam maleylacetoacetate isomerase 24 211 IPR005955 GO:0003824(InterPro)|GO:0005737(InterPro)|GO:0009072(InterPro)
Hepe05g1872 213 Gene3D Glutaredoxin 24 100 - -
Hepe05g1872 213 SFLD Main (cytGST) 22 192 - -
Hepe05g1872 213 Pfam Glutathione S-transferase, N-terminal domain 24 100 IPR004045 -
Hepe05g1872 213 Pfam Glutathione S-transferase, C-terminal domain 149 188 - -
Hepe05g1872 213 PANTHER MALEYLACETOACETATE ISOMERASE 20 210 - GO:0004364(PANTHER)|GO:0006559(PANTHER)|GO:0006749(PANTHER)|GO:0016034(PANTHER)
Hepe05g1872 213 SUPERFAMILY GST C-terminal domain-like 102 201 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1872 Hepe-Chr5:69014338 Hepe08g1222 Hepe-Chr8:12819996 3.33e-78 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1872 K01800 - csv:101213403 310.842