Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1886 ATGGAGACCAATCCCGCCGCCGCCGTCGTTAGCAATACCCCAAGCATCCCGCCGGAGAAAAGAAACCGTTCCATCTTCAACGTCCCGCCGGACTTCTTTGATTCCTGCAAACTTCTTCGTTCTCCACACTCATACACCTCATCAACCAGCGGCAGTTACAGGGATAGCTCAAGCGTAGAAAACCCAGTCGATTCGGAGCAGAACTCTAGGGATTTCAAAGAAAGTTCCGTCGCCCACAGATGGACCTGCAACACATGCAAGGCCGAGTTCGAATCCCTCCTCGACCAGCGTTCGCACTTCAAATCCGACCTTCACCGGTTCAATGTGAAACTAAGCATTGCTGGAAAGAATATTGTGAAGGAGGATGATTTTGATGAGCTGACATCTGATTCTTTCAGAGACTATGATGTGTCAAGTATTTCTGGATCAGAGGATGAATCAGAGAAGGAGATTTACTCTCGGAATGAAGGGTCTAAGGGAACTAGTGATAATGTCAGCAAGAAGAGGTTGTTTGTTCATCTTCAAACAGGTGAAAGAGTTTCAGTTTGTAAGTGTTTGCTCATAAATGAGTCAGATAGTATTTCGTATGAAGATGATAAAACATCGGTCAGTGGTTATGGTGTTCATGCACAGTACCTTAGAGAGAATGAAGTCGTAGCAAGATTAAAATATTTAAATCGTGAGCCAAGAGATGGGACCCATTTGCGGATAGTGTTGCTTGCAAGTGGTGGGCACTTCGCAGGTTGTGTTTTTGATGGGAACTTGGTTGTAGCTCATAAAACCTTTCACAGATACGTGGTGAGAGGCAAGTCTGGAAAGAAGCAGTCATCAAAAGATGCAGGTGGCAAGACAATCAGTTCTGCTGGGGCTTCACTTCGTCGTTATAATGAAATGGCGTTGAAGAAGGAAATTCAAGATCTCCTTGCTGCTTGGAAGTCCTATTTTAATGCTTCATCATGCGTTTATATTTATGCTCCTTCAAACAACCGGCAATTGCTTTTTAATGGGGACAAGCCATATTTTAGTGATCAGCACTCTGCTGTCCGGAATATTCCTTTGACTATTCGAAGGCCTACATTGAAAGAAGCCCGGCGTGTTTATGAACAATTGGTGCAAGTAGTGTATGAAGTAGACGAGAAGGAAATATTGTCCACCAGTCAGCACACTTCACTGTTGAGTGCAGTTACAATAGACAATGGCACCCAAGAAATAAGTGAAAAGAAAGTCATTGGAGACTTGGAAAAGGATGCTCGTACGCATCTTGAAGAATCTGTTGAACACTGCGTACCTAGTGAGAGTGAAAGTGAAGTTGTTGGTAGAACTACACCTTTGCATGAAGCATCAGAGTCTGGAAATGCAGATAAGGTTTTGGAACTCCTTGAACAGGGTCTTGATCCTTGCATCAAAGACGAAAGAGGACGCACTCCTTACATGCTAGCAAGTGAGAAGGAAATCCGGAATAACTTTAGAAGGTTCATGGCTTCAAACCTTGATAAGTGGGATTGGGATGCTGCTAAGGTACCCAGCGCTTTAACCAAGGAAATGGAGGAATCTCAAGCTGCTAAGCAGGTAGAAAAAGATGCCAAGCGAAAGGCAAGAGCGAAGGAATTGAAGAAATTAAAGAAAGAAAAGGCCAAGAAAGCACAGGCCGAGGCTGCTGAATCTCAAAAAGCTGTGAAGACGGAACAGAGCAGAGGAATTGGATCTATTTTGAATTATCGAGCTGAGACAACCAGTGGAAAACTGATTATTACCAAAGAGATGGCACATGTAGCTGAACGTGAAAAGAGAGCAGCAGCTGCCGAGAGGAGAATCGCAGCCATGGCCGCAGCTGCAGCCACCAATGGTTCCTCGTCAACTACTCCGAACAGCTCACAGACTAAAGCCGGGTTAGCAGGGGATGAAAACTGTTCCTGTTGTGGCACATCGCTGGTCGGTAAAGTTCCTTTCCACCGGTACAACTACAAATATTGCAGCTCAACATGCATGCATGTACACAGAGAGGTCCTTGAAGAAAACTAG 2022 44.76 METNPAAAVVSNTPSIPPEKRNRSIFNVPPDFFDSCKLLRSPHSYTSSTSGSYRDSSSVENPVDSEQNSRDFKESSVAHRWTCNTCKAEFESLLDQRSHFKSDLHRFNVKLSIAGKNIVKEDDFDELTSDSFRDYDVSSISGSEDESEKEIYSRNEGSKGTSDNVSKKRLFVHLQTGERVSVCKCLLINESDSISYEDDKTSVSGYGVHAQYLRENEVVARLKYLNREPRDGTHLRIVLLASGGHFAGCVFDGNLVVAHKTFHRYVVRGKSGKKQSSKDAGGKTISSAGASLRRYNEMALKKEIQDLLAAWKSYFNASSCVYIYAPSNNRQLLFNGDKPYFSDQHSAVRNIPLTIRRPTLKEARRVYEQLVQVVYEVDEKEILSTSQHTSLLSAVTIDNGTQEISEKKVIGDLEKDARTHLEESVEHCVPSESESEVVGRTTPLHEASESGNADKVLELLEQGLDPCIKDERGRTPYMLASEKEIRNNFRRFMASNLDKWDWDAAKVPSALTKEMEESQAAKQVEKDAKRKARAKELKKLKKEKAKKAQAEAAESQKAVKTEQSRGIGSILNYRAETTSGKLIITKEMAHVAEREKRAAAAERRIAAMAAAAATNGSSSTTPNSSQTKAGLAGDENCSCCGTSLVGKVPFHRYNYKYCSSTCMHVHREVLEEN 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 69198620 69204307 - Hsped.05g18860.1 Hepe05g1886 571151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1886 673 ProSitePatterns Zinc finger C2H2 type domain signature. 83 105 IPR013087 -
Hepe05g1886 673 Gene3D - 402 514 IPR036770 -
Hepe05g1886 673 Pfam Bacteroidetes VLRF1 release factor 237 373 IPR041175 -
Hepe05g1886 673 Coils Coil 531 565 - -
Hepe05g1886 673 SUPERFAMILY Ankyrin repeat 438 494 IPR036770 -
Hepe05g1886 673 MobiDBLite consensus disorder prediction 138 163 - -
Hepe05g1886 673 MobiDBLite consensus disorder prediction 45 65 - -
Hepe05g1886 673 Pfam Vms1-associating treble clef domain 636 669 IPR041540 -
Hepe05g1886 673 MobiDBLite consensus disorder prediction 45 71 - -
Hepe05g1886 673 MobiDBLite consensus disorder prediction 139 156 - -
Hepe05g1886 673 MobiDBLite consensus disorder prediction 1 20 - -
Hepe05g1886 673 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 19 672 IPR047139 GO:0030433(PANTHER)
Hepe05g1886 673 MobiDBLite consensus disorder prediction 540 561 - -
Hepe05g1886 673 ProSiteProfiles Ankyrin repeat profile. 439 471 IPR002110 GO:0005515(InterPro)
Hepe05g1886 673 MobiDBLite consensus disorder prediction 1 23 - -
Hepe05g1886 673 ProSiteProfiles Ankyrin repeat region circular profile. 439 471 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1886 K26089 - csv:101216211 1028.47