Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe05g1889 | ATGGAATTGAATATCAACATCATCTTCACCATCTTTTCCATCATCGTACTATTCACAATCTCCCTCTTCTCGATTCTCCTCCTCCGAACACTCGCCGGAAAATCCATAACAAACTCCGACTACTCACCAGTATACGGCACCATATACGGCCAGGCTTTCTACTTCAACAACCTCTACGATCACCTAACGGCGGTGGCGAAGCGGCTTGGAACCTTCCGGCTGATTTCGGCGGCGTACAGCGAGATTTACACGGTCGATCCTCGAAACATCGAACACATATTGAAGACGAAATTCGACAAGTATACGAAAGGAAGCAAAGATCGAGAAGTCGCTGGAGATCTGTTCGGAGAGGGAATCTTTGCGGTGGATGGAGAGAAGTGGAAGGAGCAGAGGAAATTGGGTAGCTATGAATTCTCGACGAGGATTCTTAGGGATTTTAGCTGCTCTGTTTTCAGACGAAATGCTGCTAAACTTGTTGGAGTTCTTTCGGAGCTCGATGGCGCGGCTCCAGGTTTCGATATACAGGATTTGCTAATGAGATGCTCTCTAGACTCCATTTTCAAAGTTGGGTTCGGCGTGGATTTAAATTGCTTGGAGGAACCAAGCAAATCAGGGAGCAGATTCATGAAGGCCTTCGATGATTCTAGCGCTCAGGTTTTTTGGCGATTTATTGATCCTTTCTGGAAATTTAAAAGATTTCTCAACATCGGTTCCGAATCTTCGTTTAGGAACAATGTCAAAATCATAGATGCTTTTGTTCACCAGTTGATCGGTGAAAGGAGAAAATTGCTTCAGCAACCTAATCTCAAGAATGACAAAGAGGACATACTTTCAAGGTTTCTGATGGAAAGTGAGAAGGATCCAACAAGAATGAATGATAAATATCTAAGAGATATAGTCCTGAATTTCATGTTGGCTGGCAAAGATACAAGTGCAGGAACTCTGTCTTGGTTCTTCTACATGCTATGCAAGAACCCTTTAATACAGGAAAAAGTTGCAGAAGAAGTGAGACAAATTGTTGGGGTTCAAGAGGAAGAAGCTGACATAAATTTGTTTGTACAAAACTTGACTGATTCAGCTATTGACAAAATGCATTATCTTCATGCAGCATTGACAGAGACTCTAAGGCTCTATCCTGCAGTCCCTGTGGATGGAAGGACTGCAGAAATAGATGACATTCTTCCTGATGGCTATAAACTAAGAAAAGGGGATGGAGTGTACTACTTGGCCTATTCCATGGGCAGGATGCCCTGCCTTTGGGGAGAAGATGCTGAAGATTTTAAACCCGAGAGATGGCTCGAAAATGGAACTTTTCGACCCGAATCGCCTTTCAAATTCATAGCATTTCATGCGGGTCCTCGAATGTGTTTGGGAAAGGATTTTGCTTATCGACAAATGAAGATAGTGTCTGCTGCTTTGCTTCAATTTTTTCGATTCAAATTATCTGATCCAACCAGAAATGTAACTTATAGGATCATGCTTACCCTTCACATTGATGGAGGTCTCCCACTCCTTGCAATTCCAAGAATAAGAAAATTTTCCTGA | 1545 | 42.65 | MELNINIIFTIFSIIVLFTISLFSILLLRTLAGKSITNSDYSPVYGTIYGQAFYFNNLYDHLTAVAKRLGTFRLISAAYSEIYTVDPRNIEHILKTKFDKYTKGSKDREVAGDLFGEGIFAVDGEKWKEQRKLGSYEFSTRILRDFSCSVFRRNAAKLVGVLSELDGAAPGFDIQDLLMRCSLDSIFKVGFGVDLNCLEEPSKSGSRFMKAFDDSSAQVFWRFIDPFWKFKRFLNIGSESSFRNNVKIIDAFVHQLIGERRKLLQQPNLKNDKEDILSRFLMESEKDPTRMNDKYLRDIVLNFMLAGKDTSAGTLSWFFYMLCKNPLIQEKVAEEVRQIVGVQEEEADINLFVQNLTDSAIDKMHYLHAALTETLRLYPAVPVDGRTAEIDDILPDGYKLRKGDGVYYLAYSMGRMPCLWGEDAEDFKPERWLENGTFRPESPFKFIAFHAGPRMCLGKDFAYRQMKIVSAALLQFFRFKLSDPTRNVTYRIMLTLHIDGGLPLLAIPRIRKFS | 514 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 69219911 | 69225272 | - | Hsped.05g18890.1 | Hepe05g1889 | 571154 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe05g1889 | 514 | CDD | CYP86A | 71 | 502 | - | - | |
| Hepe05g1889 | 514 | PANTHER | CYTOCHROME P450 | 24 | 502 | - | - | |
| Hepe05g1889 | 514 | PRINTS | P450 superfamily signature | 369 | 380 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g1889 | 514 | PRINTS | P450 superfamily signature | 456 | 467 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g1889 | 514 | PRINTS | P450 superfamily signature | 306 | 323 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g1889 | 514 | PRINTS | P450 superfamily signature | 447 | 456 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g1889 | 514 | PRINTS | E-class P450 group I signature | 315 | 341 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g1889 | 514 | PRINTS | E-class P450 group I signature | 446 | 456 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g1889 | 514 | PRINTS | E-class P450 group I signature | 295 | 312 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g1889 | 514 | PRINTS | E-class P450 group I signature | 368 | 386 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g1889 | 514 | PRINTS | E-class P450 group I signature | 456 | 479 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g1889 | 514 | Gene3D | Cytochrome P450 | 40 | 505 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g1889 | 514 | SUPERFAMILY | Cytochrome P450 | 42 | 509 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g1889 | 514 | Pfam | Cytochrome P450 | 53 | 483 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe05g1889 | 514 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 449 | 458 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe05g1889 | Hepe-Chr5:69219911 | Hepe08g1776 | Hepe-Chr8:35653496 | 1.33e-122 | dispersed | |
| Hepe05g1889 | Hepe-Chr5:69219911 | Hepe05g1892 | Hepe-Chr5:69282320 | 1.66e-172 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe05g1889 | - | - | - | 0.0 |