Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1917 ATGGGTTTTCAACCACGATTCGACTTTAGTGGTTGTTACGGCGGCGGAGACGACGGCGGAGACGACGACAGTCTTCTTATGGCCGCCTCCGGTGCAATCGCTCACAGTCTTGTTACTCAGTCTTCTTTCCCTAAATCGATGTTCTCTTCTCCCAGACTCTCTCTGGCTCTCACGAACATCGATGGGCTCGGCGCCGGCGAGATGATTCCGTCGGATGGTTGTTTTGAGGTGAATGGTAGGAGGAGGAGTAGAGAGGAAGAGCCACCGACGGAGAGTAGATCCGGTAGCGACAATATGGATGGAGGTGGTTCCGGCGACGATCTCGACGCCGCCGCTGCCGGCGATAACCCGAGGAAGAAGAAACGGTACCATCGTCATACTCCCCAACAAATCCAAGAACTCGAAGCAATGTTTAAGGAATCTCCTCATCCCGATGAGAAACAACGATTAGATCTCAGTAGAAGACTCTCTCTGGAAACAAAACAAGTTAAATTCTGGTTTCAAAATCGTCGAACTCAAATGAAGACTCAATTAGAACGCCACGAAAACACATTACTAAGACAAGAGAACGACAAGCTCCGAGCAGAGAATATGGCGATTCACGAGGCGATTCGGAGTCCAATCTGTTCCAACTGTGGCGGAGCAGCCATAATCGGAGAAATCACTATAGAAGAACAGCAACTCCGAATCGAAAACGCTCGATTGAAGGACGAATTGGAGCGAGTCTGTGCCTTAACTGGGAAATTCCTTGGCGGACGAGTTGTACCGCAATTGACGGAGGAATATGGAGTTGGAGGAGGTGGTGGAATGATGACGATGGAGAGATCGTCTATGTATTTGGAAATGGGTTTGGCGGCCATGGATGAGCTAGTGAAAATGGCGAATTATAATGGTGAAGAACCATTATGGATTGGAGAGAGATTGAACGAGGAAGAATATTTGAGAATGTTCAGTTGTTTCGGGATTCATAATAATAAACAGAATGGATTTGTTACAGAAGGAACTAGAGAATCTGGAATCGTCGTCGTCAATACTTCTGCTCTTCTGGAGACTTTAATGGACTCTAACCGGTGGGTGGAGATGTTTCCGACGTTGATCGCAACGGCGACCACCACCGACGTGATCTCCGGCGGCATAGGAGGAACCAGAGACGGCGCTCTTCAACTGATGCATGCGGAGCTTCAAATTCTGTCTCCCATGGTTCCGGTGAGACAATCGAGCTTCCTCCGCTTCTGCAAGCAGCACGCCGAAGGCGTCTGGGCCGTCGTCGACGTCTCGATCGATGCCGTTACTGAAACTTCCTCTCCACGGTGTTGGAGACTCCCCTCCGGCTGCCTCATCCACGAAATGCCCAATGGCTACTCCAAGGTTACTTGGGTTGAGCATTGGGAATACGATGAAAGCTACATCCACGAATTGTACCGGCCTCTCGTACGCTCCGGCCTCGGCTTTGGCGCTCGACGGTGGATTGCCACCCTCCAACGCCAATCCGAGTGCCTCGCTATCCTCATTTCCACCCCGTCAGATCATTCAGGGATATCGGGAAGTGGGCGGCGGAGCATGGTGAAGCTAGCGCAGCGGATGACGGGGAATTTCTGCTCGGGAGTATGCGCGTCGACGGTGTACAAATGGAAGAAGCTGCACACGAGCAATAATGTGGGAGAGGATGTGAGAGTGATGACAAGGAAGAGCGCGGAGGATCCCGGGGAGCCGCCGGGGACGGTGCTGAGTGCATCGATGTCGGTGTGGGTGGCGGTAGCGGCGGAGAGAGTGTTCGAGTTTCTTAGAGATGAGAGGCTGAGGAGCGAATGGGACATTCTATCCAACGGCGGACCCATGCAGGAGATGGTTCATATCCCTAAATCCCAACACCACCACCATGCCAACGCAGTCTCTCTCCTCCGTGCCCCCTCTGTAAATCCAAACCAGAGCAGCATGTTAATTCTGCAAGAGACCTGCTCCGATCCATCTGGGTCGTTTGTGGTGTACGCGCCGGTGGACATTCCGGCGATGCAGGTGGTGATGAACGGCGGCGACTCAGCCTACGTGGCTTTGCTTCCATCTGGGTTCGCAGTAGTGCCGGCGACGGAGGGAGGCGGCGGAGGAAGTCTGTTGACGGTGGCGTTTCAGATATTGGTGAACAGTTTGCCGACGGAGAAGCTGACGGTGGAGTCGGTGGAGACGGTGAATAATCTGATATCGTGTACGGTTCAAAAAATTAAAGCCGCCCTCCGATGTCACGAGCCTTGCACGTGA 2256 52.66 MGFQPRFDFSGCYGGGDDGGDDDSLLMAASGAIAHSLVTQSSFPKSMFSSPRLSLALTNIDGLGAGEMIPSDGCFEVNGRRRSREEEPPTESRSGSDNMDGGGSGDDLDAAAAGDNPRKKKRYHRHTPQQIQELEAMFKESPHPDEKQRLDLSRRLSLETKQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMAIHEAIRSPICSNCGGAAIIGEITIEEQQLRIENARLKDELERVCALTGKFLGGRVVPQLTEEYGVGGGGGMMTMERSSMYLEMGLAAMDELVKMANYNGEEPLWIGERLNEEEYLRMFSCFGIHNNKQNGFVTEGTRESGIVVVNTSALLETLMDSNRWVEMFPTLIATATTTDVISGGIGGTRDGALQLMHAELQILSPMVPVRQSSFLRFCKQHAEGVWAVVDVSIDAVTETSSPRCWRLPSGCLIHEMPNGYSKVTWVEHWEYDESYIHELYRPLVRSGLGFGARRWIATLQRQSECLAILISTPSDHSGISGSGRRSMVKLAQRMTGNFCSGVCASTVYKWKKLHTSNNVGEDVRVMTRKSAEDPGEPPGTVLSASMSVWVAVAAERVFEFLRDERLRSEWDILSNGGPMQEMVHIPKSQHHHHANAVSLLRAPSVNPNQSSMLILQETCSDPSGSFVVYAPVDIPAMQVVMNGGDSAYVALLPSGFAVVPATEGGGGGSLLTVAFQILVNSLPTEKLTVESVETVNNLISCTVQKIKAALRCHEPCT 751
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 69520936 69526341 + Hsped.05g19170.1 Hepe05g1917 571182
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1917 751 SUPERFAMILY Homeodomain-like 104 177 IPR009057 -
Hepe05g1917 751 SMART HOX_1 118 181 IPR001356 GO:0003677(InterPro)
Hepe05g1917 751 Gene3D - 280 491 IPR023393 -
Hepe05g1917 751 MobiDBLite consensus disorder prediction 68 127 - -
Hepe05g1917 751 Pfam Homeodomain 120 175 IPR001356 GO:0003677(InterPro)
Hepe05g1917 751 Coils Coil 218 245 - -
Hepe05g1917 751 ProSiteProfiles 'Homeobox' domain profile. 117 177 IPR001356 GO:0003677(InterPro)
Hepe05g1917 751 ProSitePatterns 'Homeobox' domain signature. 152 175 IPR017970 GO:0000981(InterPro)|GO:0006355(InterPro)
Hepe05g1917 751 ProSiteProfiles START domain profile. 272 502 IPR002913 GO:0008289(InterPro)
Hepe05g1917 751 MobiDBLite consensus disorder prediction 77 93 - -
Hepe05g1917 751 SUPERFAMILY Bet v1-like 277 499 - -
Hepe05g1917 751 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 105 746 IPR042160 -
Hepe05g1917 751 SMART START_1 281 499 IPR002913 GO:0008289(InterPro)
Hepe05g1917 751 FunFam Homeobox-leucine zipper protein HDG1 106 193 - -
Hepe05g1917 751 CDD START_ArGLABRA2_like 277 498 - -
Hepe05g1917 751 Coils Coil 171 198 - -
Hepe05g1917 751 CDD homeodomain 120 177 IPR001356 GO:0003677(InterPro)
Hepe05g1917 751 Pfam START domain 285 498 IPR002913 GO:0008289(InterPro)
Hepe05g1917 751 Gene3D - 109 193 - -
Hepe05g1917 751 SUPERFAMILY Bet v1-like 517 733 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1917 Hepe-Chr5:69520936 Hepe08g0472 Hepe-Chr8:4138873 3.42e-208 dispersed
Hepe03g0511 Hepe-Chr3:8847067 Hepe05g1917 Hepe-Chr5:69520936 1.02e-306 wgd
Hepe05g1917 Hepe-Chr5:69520936 Hepe07g0176 Hepe-Chr7:1574301 1.50e-255 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55684 PF01852 START 8.30E-44 CL0209 Hepe TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1917 K09338 - csv:101222248 914.064