Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1930 ATGGATTTATCTTGTAATATTTGGAAGCAAAGTGTGTTATGTGGTAGTGAAAGAACGTATTGCAAGACGTTGGGTCAGTTTGGTCCTAGCAATGTGATTAGAAGTAGAATTATTGATGCCAAGTTGACTGGTGGTGGTTCAGGAGTCATTTATAAAGTGCCTAAGAAGAGAAACAGAATTGTAGCTTCTAGCAATTCCAATCGTTTGAGTCTGGTTTGTGCTAGCAAGTTTGACGGTGCTTTGAAAATTATTAAGCACAAGAGATTCTTGAACTGTAACAATAAGACAATTGGAAGAAGTATGGGGATGGTTCATTCAGAGTGTCAAAGCAATGATTCTTTAGCATTTATTGATGGAAATGGCAGAAATATTGAATATGGAGACAATGGTGATGAAGGTTCCAGTTCTGTGCCTCTTGATGGTGTAGTGTCAGCTGGTTCCAGAGAAGCTGATGGAGATCCAGGAGCGGTAGAAACGGACGCCCCGACATTGGATGAGCTTAGAGAATTGTTGCAAAAGGCTATGAAAGATTTGGAAGTTGCGAGACTTAACAGTACCATGTTCGAGGAGAAGGCCCAAAAAATATCAGAATTAGCAATAGCTTTGCAAGATGAAGCAGCCAATGCTTGGAATGATGTGAACTCTACTCTCGATTCTGTACAGCAGGTAGTGAATGAAGAATATACCGCCAAAGAAGCTGTTCAAAAAGCAACCATGGCTCTTTCACTTGCAGAGGCAAGGCTTCAGGTGGGAATAGAGTCATTGGAGCAGGCAAAGGGAGGAAATGATTATCCAGAAACATCAATAGACAGTGAGGGGGAGCTTGATGGCAAGGAAGAGCAAGAGGTGTTGTTAGCTGCTCAGGAGGACATCAGAGAATGCCGGGCAAATTTGGAAACTTGTGATACGGAATTGAAGCGGTTACAAAGTAAAAAGGAAGAGTTACAGAAGGAAGTGGACAGGTTGAACGAGTTGGCTGAAAAAGCACAATTGAATGCCTTGAAAGCTGAAGAAGATGTGGCAAATATAATGCTTTTGGCTGAGCAAGCTGTTGCTTTTGAACTTGAGGCTGCCCAAAGGGTTAGTGATGCTGAAATTGTTTTACAGAAAGTGGAGAAATCTTCATCAAATTCTTTTGTTGACACTTCAGAAACCACACAGGGGTTAAATGTTATTGAAGAAGTTGCTAATGAGGATAATAAGGCAGTTCTAGAAATTTCTGGTGATATCGCTGTTGAAATGGATAGAGATTTGCCACTTAGTGGTGATTCCTTAGCTGTCAAATCTCTACCAAGCAGCTTTTCAGATTCTGAAGACTCTGATCAACCATATTACTCAAGTGATAGTGAGAATGGAAAATTGAGTTCAGACTCCTTAAAGGAGGTTGAATCTGGAGCAGAAAAGTCTATTTTGAGTCAAGCAAAAAAGCAGGAAACACAGAAGGATTTTACTAGAGAAGGCTCATCCTTAAATTCCCCCAAGCCTCTATTGAAAAAATCTTCTCGCTTTTTTTCAGCATCATTCTTTTCGTTTACAGTTGATGGGACAGAGTTCACTCCAGCATCAGTCTTCCAGGGTCTTCTGGATTCCACAAAAAAGCAGTTGCCGCAGCTAGTTGTTGGATTAGTACTGTTAGGAGCAGGGATCACTATCTTTGCAAATCGAGCAGAAAGGAATTCTCAGATGTTTCAGCAGCCTGATGTTGTCACCATTAGCACTGATGAAATTTCCTCCAATACGAAGCCTTTATTTCAACAATTAAGGAAACTTCCTGAAAGAGTGAAAAAGTTAATTTCAAAGATTCCCCATCAAGAGGTGAATGAAGAGGAAGCTTCACTCTTAGATGTGGTATGGCTATTGCTTGCTAGTGTTATATTTGTGCCAACATTCCAGAAACTTCCTGGAGGAAGTCCTGTCCTGGGGTACTTGGCTGCTGGCATTTTAATTGGGCCATATGGTTTCTCCATAATCCGTCACGTGCATGGAACAAAAGCAATTGCGGAATTTGGAGTTGTTTTTCTCCTGTTCAACATTGGCCTTGAGTTATCAGTTGAGAGGCTAAGTTCCATGAAGAAATATGTATTTGGGTTAGGATCTGCACAGGTTTTGGCTACAGCTGTGGTTGTTGGCTTGGTTGCTCATATTGTTTGTGGGCAGGCTGGCCCAGCTGCAATTGTCATTGGAAATGGTTTAGCTTTGTCATCCACTGCTGTCGTCCTTCAGGTGTTGCAAGAACGAGGTGAGAGCACTTCACGGCATGGACGTGCCACATTTTCTGTCTTACTATTCCAGGATTTGGCTGTTGTGGTTTTGCTGATTCTCATACCTCTAATTTCACCTAATTCATCCAAAGGAGGGATTGGTTTTCAAGCCATTGCTGAAGCTCTTGGCCTGGCTGCTGTTAAGGCAATGATTGCCATTTCTGCCATTATAGCTGGTGGGCGCCTGCTACTACGACCAATTTATAAACAAATAGCTGAAAATCAAAATGCAGAAATATTCTCGGCCAACACACTTCTTGTCATTCTGGGAACAAGTCTACTTACTGCCAGGGCTGGACTATCAATGGCGCTGGGTGCCTTTTTAGCTGGTTTACTACTAGCAGAAACGGAATTCTCCTTGCAGGTTGAATCTGATATTGCTCCATATCGTGGCCTGCTATTGGGTCTCTTCTTCATGACGGTTGGGATGTCTATTGATCCAAAACTTCTTCTTTCTAACTTTCCTGTTATCATGGGGTCTTTGGGACTTCTTATTGGTGGCAAGACTATATTGGTTGCCTTGATTGGTAGGTTTTTTGGTATCTCAATTATATCTGCGTTGAGAGTTGGGCTGCTTCTTGCTCCTGGTGGAGAATTTGCTTTTGTGGCATTTGGTGAAGCTGTCAATCAGGGTATAATGTCTTCTCAACTATCCTCTTTATTGTTTCTTGTTGTGGGAATTTCAATGGCCATTACACCGTGGCTAGCTGCTGGTGGTCAGTTAATTGCTTCTCGTTTTGAGCAGCATGATGTTCGGAGTTTATTACCTGTTGAAAGTGAGACTGATGATTTACAAGATCATATCATTATTTGTGGATTTGGACGAGTTGGTCAGATAATAGCCCAGCTTCTGTCAGAGCGACTGATTCCTTTTGTTGCCCTTGATGTGAGGAGCGATAGAGTGGCCGTTGGACGTGCCTTAGACCTTCCTGTTTATTTTGGAGATGCTGGAAGTCGAGAGGTTCTTCATAAAGTTGGTGCTGAAAGGGCATGTGCTGCTGCAATAACACTGGATTCACCGGGTGCAAATTACAGAACCGTTTGGGCTCTGAGCAAGTATTTCCCTAATGTTAAGACTTTTGTTCGAGCTCATGATGTTGATCACGGTCTTAATTTAGAGAAGGCTGGCGCTACTGCGGTAGTTCCAGAGACGTTGGAACCAAGCTTACAGTTGGCGGCTGCCGTTCTTGCTCAGGCTAAACTACCCACGTCAGAGATTGCTGCAACAATCAACGAGTTTAGGTCCCGACATTTATCCGAGCTTACCGAGCTATGTGAAGCCAGTGGAAGTTCACTCGGATACGGGTTTTCTCGAATGATGATTAAACCGAAAATTCAAACCTCCGATTCTTCAGACGAGAACCAAATCACAGAAGGAACACTGGCTATATGA 3654 42.58 MDLSCNIWKQSVLCGSERTYCKTLGQFGPSNVIRSRIIDAKLTGGGSGVIYKVPKKRNRIVASSNSNRLSLVCASKFDGALKIIKHKRFLNCNNKTIGRSMGMVHSECQSNDSLAFIDGNGRNIEYGDNGDEGSSSVPLDGVVSAGSREADGDPGAVETDAPTLDELRELLQKAMKDLEVARLNSTMFEEKAQKISELAIALQDEAANAWNDVNSTLDSVQQVVNEEYTAKEAVQKATMALSLAEARLQVGIESLEQAKGGNDYPETSIDSEGELDGKEEQEVLLAAQEDIRECRANLETCDTELKRLQSKKEELQKEVDRLNELAEKAQLNALKAEEDVANIMLLAEQAVAFELEAAQRVSDAEIVLQKVEKSSSNSFVDTSETTQGLNVIEEVANEDNKAVLEISGDIAVEMDRDLPLSGDSLAVKSLPSSFSDSEDSDQPYYSSDSENGKLSSDSLKEVESGAEKSILSQAKKQETQKDFTREGSSLNSPKPLLKKSSRFFSASFFSFTVDGTEFTPASVFQGLLDSTKKQLPQLVVGLVLLGAGITIFANRAERNSQMFQQPDVVTISTDEISSNTKPLFQQLRKLPERVKKLISKIPHQEVNEEEASLLDVVWLLLASVIFVPTFQKLPGGSPVLGYLAAGILIGPYGFSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLATAVVVGLVAHIVCGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGIGFQAIAEALGLAAVKAMIAISAIIAGGRLLLRPIYKQIAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLLSNFPVIMGSLGLLIGGKTILVALIGRFFGISIISALRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMAITPWLAAGGQLIASRFEQHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDSPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIAATINEFRSRHLSELTELCEASGSSLGYGFSRMMIKPKIQTSDSSDENQITEGTLAI 1217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 69608796 69622314 - Hsped.05g19300.1 Hepe05g1930 571195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1930 1217 Gene3D - 1017 1181 - -
Hepe05g1930 1217 Pfam TrkA-N domain 1022 1135 IPR003148 GO:0006813(InterPro)
Hepe05g1930 1217 FunFam K(+) efflux antiporter 2 chloroplastic 1017 1181 - -
Hepe05g1930 1217 Coils Coil 291 339 - -
Hepe05g1930 1217 MobiDBLite consensus disorder prediction 430 492 - -
Hepe05g1930 1217 MobiDBLite consensus disorder prediction 430 453 - -
Hepe05g1930 1217 Gene3D - 609 997 IPR038770 -
Hepe05g1930 1217 FunFam K(+) efflux antiporter 2 chloroplastic 609 995 - -
Hepe05g1930 1217 Pfam Sodium/hydrogen exchanger family 623 989 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Hepe05g1930 1217 ProSiteProfiles RCK N-terminal domain profile. 1021 1143 IPR003148 GO:0006813(InterPro)
Hepe05g1930 1217 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1018 1159 IPR036291 -
Hepe05g1930 1217 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 328 1215 - GO:0009507(PANTHER)|GO:0015386(PANTHER)|GO:0016020(PANTHER)
Hepe05g1930 1217 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 620 900 IPR004771 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)
Hepe05g1930 1217 Coils Coil 164 184 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0686 Hepe-Chr2:7532367 Hepe05g1930 Hepe-Chr5:69608796 1.09e-100 dispersed
Hepe05g1930 Hepe-Chr5:69608796 Hepe07g0220 Hepe-Chr7:2106770 4.90e-40 dispersed
Hepe05g1930 Hepe-Chr5:69608796 Hepe08g1388 Hepe-Chr8:16310091 1.77e-38 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1930 K03455 - csv:101213081 1964.12