Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1955 ATGATGTTGGAAAATGGGAGATTACTTCCAAAATCAGTCCTGTTTGAACTTCCAACGAAATTTGGAGGAGCTTGTTCCTTCAATTCCCCGAAGTTTCTCGAGGAATCATCAAATCGCGACAAGCGGCAAAACAGAGAGCTCAATTTAGAGAACGGTAGAGATTCCCCACTTTTTTCCTCTTCAATAGAGGCATTTGGTTTCCTAGAGTTTCTTGTCATGGCGGTTGTGAGTTCTATGCAAGCAGCTACGCCTCGAGCTGGTCCAACTAATTATGTTGAAGCTTCACCAATTATGATCAGCTCAAGCAGAGAGATTGTAGAAGAGCCAGTGGGAGCTATTAGTGAAGATATAATTTGTGTTGCTGTTGGGAAAGATGTGAAAGAGTGCTTATCAGTTTTGAGATACGTACTAAAATCCTCACGTGGGAAGAAGATTTGCCTCCTTCATATTCATGTCCCTGCACAGATGATTCCATTAATGGGAACTAAATTTCCAGCAAACTCATTGGAGAAAGAGGAAGTGAGAGCATATCACGAGTTTGAGAAGCAAAATTTGTCGAGGGTCATGAATGAGTACATTCTGTACTGTCTTCAAGAAGGGGTTCATGCTGAGAGATTATGTGCTGAAGCTGAGAGTATTGAAAAGGGAATAGTTGATATGATTTCCCTGCACGGGATTAAAAAGCTTGTTATGGGAGCAGCTGTAGACAAGTGTTATTCGAGGAAAATGGTGGATCTGAAGTCTAAGAAAGCCATTTATGTGCGTTTACAGGCACCAGCTTTCTGTCACATTGAGTTTATTTGCAAGGGGAACCTCATCTGCACCAGGGAGGGTAGATCAGATAGAGCTCAAGTAGAAGCCGCCATCTCATCACCACAAACAAGTCCAGATGCTGAAGCCTCAGAAATTTCCAACCGGAGATCTCGGTCACTGCCACTGGGGCAGGCTAATAGCAGGGAAGTTGGAAGTCCATCTTTAGATTTACGTCCTAGAGGGAGATCATTGCTTGTTGACCATTTTAGAGGGAGCATACTAGATCCTACTTCTTCTCCAGATATTGTGAATGGGATTCGCACTGCAAGAAACTTGGATGTTAACATGGCTTTTGATGAATGGAGGTTATTGGCAAGGAGAAGTCCTTCTGAAAGGTCAGACAACTCCTTCCGTTCTCCTCGAGGTGTGATTGACATGGCTCCTTCTCCACTTTCCAGGGTTGAGTTCTGTGAAAATGGGCTGGAGCAGGATGGGAAAACCAGTGATTTCCTTTACAATCAATGTGAACGGGTGATGATGGAGGCTGCAAATGCGAGGCGTGATGCATTTTTAGAGGCAATTGGGCGTAGGAAATCTGAGAAAGAGACCCTTAATGCTCTACACAGGGTTAAAGCTGCAGAAGGGTTATATGCTGAAGAAATGAAACAAAGGAAGGAGGTTGAACAAGAACTAGCTCAGGAAAAGGCAAAACTTGAAAGCATAAAAAAGCAACTAAATGAAGAGATGGAAGAGCTCCGGATAGCCCAAGATCAGAAGGCTAGCCTTGAGAGAGAACTTTTAGAATCTGATCTAACGGCGACGGAGTTGGAGCAGAAGATTCTTTCTGCTGTTGAATTATTACAGAGTTACAAAAGAGAGCGAGAGGAGTTGCAGATTCAACGCGACAATGCACTTAGAGAAGCAGAGGAGCTTAGAGAAAATCAATCCGCAGGCCGATACCTTCCGCAGTTCTTTACCGAGTTCCCATTTCGGGAGATCGAGGAGGCAACTAAAAACTTTGATCCCTCCCTGAAGATTGGAGAAGGGGGATATGGGAGTATATATAAAGGTTTCTTGCGTCATACTATGGTGGCTATAAAAATCCTGCATTCTGATAGCTCTCAAGGCCCCTCTGAATTTCAACAAGAGGTTAATGTATTGAGTAAGATGAGACATCCCAATCTCGTCACGCTCATTGGAGCCTGTCCTGAAGTTTGGGTTCTCATCTACGAATACCTCTGTAACGGAAGCCTCGAAGATAGGCTCAGCTGCAAGGACAATACTCCGCCTTTATCTTGGCAAACACGAATACGCATCGCCACTGAGTTATGCTCGGCCCTTATGTTTCTTCACTCAAGTAAGCCCCACAGCATCATTCATGGTGACTTGAAACCTGGAAATATATTACTTGATGCAAATTTTGTATGCAAGCTTGGCGACTTTGGAATTTGTCGCTTATTGTCTCGGGATGAAATACTAAACAACAACGAAACACTTGTTTGGAGAACTGAAAACCCCAAGGGAACTTTTGCTTACATGGATCCTGAATTCCTTTCATGTGGAGAGCTAACAACAAAGTCAGATGTTTATTCATTCGGGATAATACTGTTGCGGTTGTTGACTGGTAGGTCTGCAATGGGTATATCAAAGGAAGTTCAATATGCAGTGGGAAATGGAAAGTTAAAATCCATTTTGGATCCTTTAGCCGGAGATTGGCCATTCGTGCAGGCTGAACAGCTCGCTCGATTGGCATTGAGGTGTTGCGATATGAATCGAAAGAGCCGCCCCGATCTCATTACTGATGTCTGGAGGGTACTCGGACCAATGAGGGCTGCCTGTGGGGGCTTATTGTCTGTCCAGCTCGGTTCTGCAGAACACTTGCAACCTCCCCCTTATTTTATCTGTCCCATCTTTCAGGAAGTCATGCAGGATCCACATGTGGCTGCAGATGGTTTTACTTACGAGGCGGAGGCCGTGAGAGGCTGGCTAGACAGTGGACATGATACTTCACCAATGACAAATCTTAAGCTCGAGCACCGCAACCTCGTCCCAAACCGCGGTCTTCGTTCTGCTATCCAGGAGTGGCTCGAACGGAAGTGA 2853 44.69 MMLENGRLLPKSVLFELPTKFGGACSFNSPKFLEESSNRDKRQNRELNLENGRDSPLFSSSIEAFGFLEFLVMAVVSSMQAATPRAGPTNYVEASPIMISSSREIVEEPVGAISEDIICVAVGKDVKECLSVLRYVLKSSRGKKICLLHIHVPAQMIPLMGTKFPANSLEKEEVRAYHEFEKQNLSRVMNEYILYCLQEGVHAERLCAEAESIEKGIVDMISLHGIKKLVMGAAVDKCYSRKMVDLKSKKAIYVRLQAPAFCHIEFICKGNLICTREGRSDRAQVEAAISSPQTSPDAEASEISNRRSRSLPLGQANSREVGSPSLDLRPRGRSLLVDHFRGSILDPTSSPDIVNGIRTARNLDVNMAFDEWRLLARRSPSERSDNSFRSPRGVIDMAPSPLSRVEFCENGLEQDGKTSDFLYNQCERVMMEAANARRDAFLEAIGRRKSEKETLNALHRVKAAEGLYAEEMKQRKEVEQELAQEKAKLESIKKQLNEEMEELRIAQDQKASLERELLESDLTATELEQKILSAVELLQSYKREREELQIQRDNALREAEELRENQSAGRYLPQFFTEFPFREIEEATKNFDPSLKIGEGGYGSIYKGFLRHTMVAIKILHSDSSQGPSEFQQEVNVLSKMRHPNLVTLIGACPEVWVLIYEYLCNGSLEDRLSCKDNTPPLSWQTRIRIATELCSALMFLHSSKPHSIIHGDLKPGNILLDANFVCKLGDFGICRLLSRDEILNNNETLVWRTENPKGTFAYMDPEFLSCGELTTKSDVYSFGIILLRLLTGRSAMGISKEVQYAVGNGKLKSILDPLAGDWPFVQAEQLARLALRCCDMNRKSRPDLITDVWRVLGPMRAACGGLLSVQLGSAEHLQPPPYFICPIFQEVMQDPHVAADGFTYEAEAVRGWLDSGHDTSPMTNLKLEHRNLVPNRGLRSAIQEWLERK 950
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 70022126 70028462 + Hsped.05g19550.1 Hepe05g1955 571220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1955 950 SUPERFAMILY RING/U-box 875 949 - -
Hepe05g1955 950 SMART serkin_6 591 857 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g1955 950 SMART Ubox_2 883 946 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Hepe05g1955 950 ProSiteProfiles Protein kinase domain profile. 591 861 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g1955 950 PANTHER OS02G0152300 PROTEIN 119 944 IPR051348 -
Hepe05g1955 950 MobiDBLite consensus disorder prediction 285 327 - -
Hepe05g1955 950 MobiDBLite consensus disorder prediction 286 322 - -
Hepe05g1955 950 Gene3D Transferase(Phosphotransferase) domain 1 664 863 - -
Hepe05g1955 950 Pfam U-box domain 881 950 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Hepe05g1955 950 ProSiteProfiles U-box domain profile. 879 950 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Hepe05g1955 950 CDD STK_N 120 270 - -
Hepe05g1955 950 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 879 950 IPR013083 -
Hepe05g1955 950 Gene3D Phosphorylase Kinase; domain 1 571 663 - -
Hepe05g1955 950 FunFam receptor-like protein kinase FERONIA 554 663 - -
Hepe05g1955 950 ProSitePatterns Protein kinases ATP-binding region signature. 597 618 IPR017441 GO:0005524(InterPro)
Hepe05g1955 950 Coils Coil 461 565 - -
Hepe05g1955 950 CDD RING-Ubox_WDSUB1-like 881 936 - -
Hepe05g1955 950 SUPERFAMILY Protein kinase-like (PK-like) 567 849 IPR011009 -
Hepe05g1955 950 Pfam Protein kinase domain 596 848 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g1955 950 ProSitePatterns Serine/Threonine protein kinases active-site signature. 709 721 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1394 Hepe-Chr4:69587232 Hepe05g1955 Hepe-Chr5:70022126 2.60e-42 dispersed
Hepe05g1955 Hepe-Chr5:70022126 Hepe08g0791 Hepe-Chr8:7089044 4.70e-150 dispersed
Hepe05g1954 Hepe-Chr5:69973304 Hepe05g1955 Hepe-Chr5:70022126 2.42e-131 tandem
Hepe03g0558 Hepe-Chr3:10877614 Hepe05g1955 Hepe-Chr5:70022126 2.15e-260 wgd
Hepe05g1955 Hepe-Chr5:70022126 Hepe07g0145 Hepe-Chr7:1324383 3.32e-178 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72844 PF00069 Pkinase 1.30E-41 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1955 - - - 0.0