Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g1969 ATGTCAATTTACGATGCTGCATTTGTGAACACTGAGCTCTCCAAACCGACCTCCATTTTCGGCCTTCGTCTCTGGGTAGTAATCGGAATCTTAGTCGGAGCCCTAATAGTTCTCGCACTGTTTCTTCTTTCACTCTGCCTCACTTCTCGCAAGCGAAACCGCCACAAGAACCAAATCCGTCTCCCTAAGTCCACAACCGACCATTCTCCTCCCGCCGTTACGAAAGAGATCCAGGAAATCGTCCACCAGGCGGCGCCGGATCATCACCACCATGCTCAGCCGGAAATTCATGTCGAGATCGGGAAATTGGAGCATCGGGTTGTCTTCTCCGATAAACCTTCTAGTGGTGAGAGTAGAGGTGCTGTGAGTGAAACTGCTTCTTTTGGATCTGGTACTGTTGGGCCTGAGGTTTCGCACTTGGGTTGGGGCAGATGGTATACTCTGAGAGAGCTCGAGGCCGCCACTAATGGCTTGTGTGAAGAGAATGTGATTGGAGAAGGTGGATATGGGATCGTGTATTTGGGCATTTTAGGAGATGGTACTAGAATTGCTATCAAGAATCTCTTGAATAACAGGGGTCAAGCTGAAAGGGAATTCAAAGTGGAAGTGGAAGTAATTGGGCGCGTAAGACACAAGAATCTTGTCAGGCTGCTGGGATATTGCGTTGAGGGTGCATATAGAATGCTTGTTTATGAGTACGTTAACAATGGCAATCTAGACCAATGGCTTCATGGCGACGTCGGGGATGTGAGCCCCATGACGTGGGAGATTCGCGTTAACATCATACTCGGAACAGCAAAGGGATTGGCCTATCTTCATGAGGGTCTTGAACCAAAGGTTGTCCATCGTGATGTAAAATCAAGCAACATACTGCTTGATCGTCAGTGGAATGCTAAAGTATCTGATTTTGGGCTCGCCAAGCTTCTTTGTTCTGAAAGGAGCTACGTGACGACTCGTGTAATGGGTACATTTGGCTATGTTGCTCCTGAGTACGCTTGCACGGGAATGTTGAATGAGAAGAGTGATGTTTATAGTTTTGGAATTCTAATTATGGAGTTAATATCCGGGCGGAGCCCCGTCGATTATAGTAGAGCCCAAGGAGAGGTAAATTTGGTTGATTGGTTGAAAGCAATGGTTGGAGACAGAAAATCCGAGCAAGTGGTTGACCCCAAGTTACCCGAAAAGCCTCCTTCCAAAGCTCTCAAACGCGTTTTGCTGGTTGCTCTTCGCTGTGTCGATCCCGATGCTACAAAGAGGCCAAAAATGGGACATGTCATTCACATGCTTGAGGCAGATAATTTGCTGTCTCATGATGAACACCGGATCGGTAGGGATTCTTCCCACTCAATTCAAGGTCATCAACATGAGAACCGGGCCGTTCCAAAACGAGTAAACACTCAGAAAGACGAAGGAGCATCTTCTATTGTAAGTGAAGGTGACAGCGATGGAAACATTCAACATTCAAGTAGGTGGAGATAA 1479 47.06 MSIYDAAFVNTELSKPTSIFGLRLWVVIGILVGALIVLALFLLSLCLTSRKRNRHKNQIRLPKSTTDHSPPAVTKEIQEIVHQAAPDHHHHAQPEIHVEIGKLEHRVVFSDKPSSGESRGAVSETASFGSGTVGPEVSHLGWGRWYTLRELEAATNGLCEENVIGEGGYGIVYLGILGDGTRIAIKNLLNNRGQAEREFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYEYVNNGNLDQWLHGDVGDVSPMTWEIRVNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNAKVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMELISGRSPVDYSRAQGEVNLVDWLKAMVGDRKSEQVVDPKLPEKPPSKALKRVLLVALRCVDPDATKRPKMGHVIHMLEADNLLSHDEHRIGRDSSHSIQGHQHENRAVPKRVNTQKDEGASSIVSEGDSDGNIQHSSRWR 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 70136357 70140280 - Hsped.05g19690.1 Hepe05g1969 571234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g1969 492 Gene3D Phosphorylase Kinase; domain 1 140 233 - -
Hepe05g1969 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g1969 492 SUPERFAMILY Protein kinase-like (PK-like) 137 430 IPR011009 -
Hepe05g1969 492 ProSitePatterns Protein kinases ATP-binding region signature. 164 186 IPR017441 GO:0005524(InterPro)
Hepe05g1969 492 Pfam Protein tyrosine and serine/threonine kinase 161 428 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g1969 492 MobiDBLite consensus disorder prediction 467 492 - -
Hepe05g1969 492 MobiDBLite consensus disorder prediction 442 492 - -
Hepe05g1969 492 ProSiteProfiles Protein kinase domain profile. 158 435 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g1969 492 CDD STKc_IRAK 164 430 - -
Hepe05g1969 492 FunFam Putative receptor-like serine/threonine-protein kinase 234 444 - -
Hepe05g1969 492 MobiDBLite consensus disorder prediction 442 465 - -
Hepe05g1969 492 PANTHER OS01G0323000 PROTEIN 8 469 IPR052232 -
Hepe05g1969 492 SMART serkin_6 158 429 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g1969 492 FunFam Probable serine/threonine-protein kinase At1g01540 138 233 - -
Hepe05g1969 492 Gene3D Transferase(Phosphotransferase) domain 1 234 445 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0511 Hepe-Chr2:5123136 Hepe05g1969 Hepe-Chr5:70136357 2.42e-171 dispersed
Hepe04g1254 Hepe-Chr4:68027821 Hepe05g1969 Hepe-Chr5:70136357 3.94e-201 dispersed
Hepe05g1969 Hepe-Chr5:70136357 Hepe08g1295 Hepe-Chr8:14484578 3.23e-206 dispersed
Hepe05g1969 Hepe-Chr5:70136357 Hepe07g0126 Hepe-Chr7:1137360 4.53e-69 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72846 PF07714 PK_Tyr_Ser-Thr 9.60E-46 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g1969 - - - 0.0