Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g2017 ATGTTCAAGTTTAGGGGTTCCCGGAAGCCAAAACCTGTAAGGTTTCGATATCCATCTGATTTCTTTGTCAATTATGGAGCTACCCAAAAGAAAAGCAGACTGCAGTCAATATTGGAGAACATTTCTATTGTTTGGAAGAAAACTCTTGATCCACAGAAGCCATTTCTTCAGCAATGGAACAAGATATTTGTGCTGTCCTGTGTCATAGCAGTAGCTGTGGACCCTCTCTTCTTTTACATCCCAGTGTTTGATGGACAACATCAATGCCTTACCATGGACCGACCCCTTATGATCGTTGCTTGCGTTCTTCGTTCGTTCATTGACATATTTTATCTACTTCACATGATCTTTGAATTTCGAACGGGTTTTCTGCCCTCTTCTTTACCAGCACTAGGAAGTGCTGACTTAATTGAAGATATAGCAGCTATAGCCAAGAGATACCTATTTTCAAACTTCACAGTTGATATCTTATCCATTCTCCCACTGCCTCAGCTTTTGGTATTAGTTATCGTACCTGCATTGGAAGGCCCGATTCCATTGAAGACAAAGGACTTTGTAAAGATTGCAGTTCTTTTGCAATACATTCCAAGGCTTCTCCGAATTTATCCACTATACAGAGAAGTAACCAGAACTTCTGGCATACTAACAGAAAGAGCCTGGAGTGGAGCTGCCTTCAATCTCCTTATTTATATGCTAGCTAGTCATGTAGTTGGTGCCCTTTGGTATCTGTTTTCAGTAGAACAACAAGCAAGATGTTGGCTCGAGGCATGTAAAAAAAATAACTGTATCAGCAATTTTCTGTACTGTGGAGATCAAAGCAGACAGGCATACCTGTTTATAGATAAGTATTGCCCTCATAAAGAGACTGCAGTTAACAATGTCTTCAACTTTGGGATGTATGTTGAAGCCCTTAAGTTTCATTTAACTGAATCGACGAGTTTTCGCCGCAAATTCGTTTATTCCTTCTGGTGGGCTCTGCGAAATGTCGGCTCCAGTGGACAAAACCTCGTAGTAAGCGATTACATGGGGGAGGTTCTTTTTGCCGTCTTTATTGCCCTCCTTGGTTTGGTTTTATTCGCGTTACTCATTAGCAACATTCAGAAATATCTGCAGTCAAGTACAAGTACTGTCAGAGTAGAGCAGATGAGAATTAATCGAAGAGATGCCGAGAATTGGATGGCACATCGTATGCTCCCGAAGAAGTTGAGGCAGCGTATTAGACGATATGATCAGTACAAATGGCAGCTAAACAGGGGAGTTAAGGAAGATGAATTGATTAATAACTTTCCTATAGACCTTAGGAGAGACATCAAACGCCATCTTCACTTTGATGCTTGCTTGGCTATTCTTAAGAGAGTGCCATTTTTTAGTAGTATGGATACGCGACTGTTGGAAGTAATGTACGAATATCTCAAGCCAGTGTTATTCACAGAGCATAGTACCATTTTGCAAAACGGTGACCCAATTGTTATGATGCTATTTATTGTGAAAGGAAAGCTGGCTGTTAGTGATTGGGAAAACAGATCTTACACGGTTGTTCTTAAGGCTGGCGACTTTTACGGTGAAGAGATTATTCCATGGGCATTGGAAGCCCACCCAACTTCTCTTCCAATTTCAACCAGAACAATTAAATCTCTAACTAAGGTTGAAGCCTTTGCTCTAGAGGCTAAGCAGCTGCAATCTGTAGCTAGTCAGTTCTACCTCCAGTACCTCGATGGCAAGCAATCAATGAGGCTCTACTCTCGTGAATGGAGAGTCTGGGCAGCATGTAAAGTACAAGAAGCTTGGCTTAAATACTGTGAAAGAAAGCAGAAGAGGGGGGGTGGAGATCGTAGGTTTCAAGATGCATTGGCTAAAACAGTTGGCACCTCGGCAAGCTCAGGTGCCACTCTATATGGATCTATATTCATATCCCATCTACTGCAAGCTGTGCATCGAGATCGACACCAGGAAACTACCCAACTCTCACGAAAGATGGCACTACTGCCACCACCGAAGCCAGACGAGCGAGACAAGCTAGACCACACCATCTTGGATCTTTAA 2043 42.29 MFKFRGSRKPKPVRFRYPSDFFVNYGATQKKSRLQSILENISIVWKKTLDPQKPFLQQWNKIFVLSCVIAVAVDPLFFYIPVFDGQHQCLTMDRPLMIVACVLRSFIDIFYLLHMIFEFRTGFLPSSLPALGSADLIEDIAAIAKRYLFSNFTVDILSILPLPQLLVLVIVPALEGPIPLKTKDFVKIAVLLQYIPRLLRIYPLYREVTRTSGILTERAWSGAAFNLLIYMLASHVVGALWYLFSVEQQARCWLEACKKNNCISNFLYCGDQSRQAYLFIDKYCPHKETAVNNVFNFGMYVEALKFHLTESTSFRRKFVYSFWWALRNVGSSGQNLVVSDYMGEVLFAVFIALLGLVLFALLISNIQKYLQSSTSTVRVEQMRINRRDAENWMAHRMLPKKLRQRIRRYDQYKWQLNRGVKEDELINNFPIDLRRDIKRHLHFDACLAILKRVPFFSSMDTRLLEVMYEYLKPVLFTEHSTILQNGDPIVMMLFIVKGKLAVSDWENRSYTVVLKAGDFYGEEIIPWALEAHPTSLPISTRTIKSLTKVEAFALEAKQLQSVASQFYLQYLDGKQSMRLYSREWRVWAACKVQEAWLKYCERKQKRGGGDRRFQDALAKTVGTSASSGATLYGSIFISHLLQAVHRDRHQETTQLSRKMALLPPPKPDERDKLDHTILDL 680
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 70741706 70744701 + Hsped.05g20170.1 Hepe05g2017 571282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g2017 680 CDD CAP_ED 455 565 IPR000595 -
Hepe05g2017 680 ProSiteProfiles cAMP/cGMP binding motif profile. 455 562 IPR000595 -
Hepe05g2017 680 Gene3D Helix hairpin bin 377 441 - -
Hepe05g2017 680 SUPERFAMILY cAMP-binding domain-like 380 566 IPR018490 -
Hepe05g2017 680 Pfam Ion transport protein 60 375 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe05g2017 680 MobiDBLite consensus disorder prediction 663 680 - -
Hepe05g2017 680 Gene3D Jelly Rolls 453 567 IPR014710 -
Hepe05g2017 680 MobiDBLite consensus disorder prediction 660 680 - -
Hepe05g2017 680 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 32 631 - -
Hepe05g2017 680 Gene3D - 60 372 - -
Hepe05g2017 680 SUPERFAMILY Voltage-gated potassium channels 50 371 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g2017 Hepe-Chr5:70741706 Hepe08g2208 Hepe-Chr8:61746422 2.52e-178 dispersed
Hepe05g2017 Hepe-Chr5:70741706 Hepe05g2018 Hepe-Chr5:70747854 0.0 tandem
Hepe05g2017 Hepe-Chr5:70741706 Hepe06g0783 Hepe-Chr6:54472140 1.62e-216 wgd
Hepe05g2017 Hepe-Chr5:70741706 Hepe07g0079 Hepe-Chr7:758841 1.91e-125 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g2017 K05391 - csv:101206492 847.81