Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe05g2063 | ATGAACGTGAAAACTCCGGCGACGAGGACTCGTGTTGGGAAGTACGAGCTTGGTAAAACTCTCGGCGAGGGCACTTTTGCTAAGGTCAAGTTCGCCAAAAACGTTGAGAATGGTAATTATGTTGCCATCAAGATTCTTGATCGTGAACAAGTTCTTCGCCACAAGATGGTCGAACAGTTAAAAAGAGAGATTTCGACTCTGAAAGTTATAAAGCATCCGAATGTTGCTAAGATTTATGAGGTTATGGCAAGCAAATCAAAGATCTACATTGTTCTTGAGTTTGTGGATGGAGGCGAGCTCTTTGACAAAATAGCTGCAAAGGGAAGGCTTAAAGAGGACGAGGCAAGGAAATATTTCCAGCAACTTATTAATGCTGTAGATTACTGCCATAGTAGAGGCGTGTACCATCGAGATCTGAAGCCTGAAAATCTTCTTCTGGACTCACATGATGTTCTTAAAGTATCAGATTTTGGATTGAGTGCATTTTCGCAGCAAGTACGGGGGGATGGTCTTCTTCACACTGCCTGTGGGACCCCAAACTACGTAGCTCCTGAGGTCTTCCATGATAAAGGTTATGATGGTACATCATCTGATATTTGGTCATGCGGGGTCATTCTCTTTGTTCTTATGGCCGGCTTCTTGCCTTTCGACGAGCCAAATCTAATGATTTTGTATAAAAAAATTTCCAAGGCTGATTTCTGCTTTCCATCATGGTTCTCAAATGGTGCAAAAAAACTAGTTCACCGCATTCTTGATCCAAACCCTCTTACTCGAATAACGATAGCTCAAATTCAAGAAGATGCATGGTTCAAGAAGGACTACACACCCGCTCAATTTCAGGTGGAAGAGGATATAACTCTCGATGATGTTGATGCTGCTTTTAGCAGCTCGAGGGAACATCATCTTGTAACCGAAAGAAAAGAGAAGCCAGTGTCCATGAATGCATTTGAGCTTATCTCTAGGTCACCAGGTTTCAGTCTTGAAAATCTATTTGAGAAGCAGAAGGTACTTATATAG | 1017 | 42.08 | MNVKTPATRTRVGKYELGKTLGEGTFAKVKFAKNVENGNYVAIKILDREQVLRHKMVEQLKREISTLKVIKHPNVAKIYEVMASKSKIYIVLEFVDGGELFDKIAAKGRLKEDEARKYFQQLINAVDYCHSRGVYHRDLKPENLLLDSHDVLKVSDFGLSAFSQQVRGDGLLHTACGTPNYVAPEVFHDKGYDGTSSDIWSCGVILFVLMAGFLPFDEPNLMILYKKISKADFCFPSWFSNGAKKLVHRILDPNPLTRITIAQIQEDAWFKKDYTPAQFQVEEDITLDDVDAAFSSSREHHLVTERKEKPVSMNAFELISRSPGFSLENLFEKQKVLI | 338 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 71115157 | 71121064 | + | Hsped.05g20630.1 | Hepe05g2063 | 571328 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe05g2063 | 338 | ProSiteProfiles | Protein kinase domain profile. | 15 | 270 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe05g2063 | 338 | Pfam | Protein kinase domain | 15 | 270 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe05g2063 | 338 | CDD | STKc_SnRK3 | 14 | 269 | - | - | |
Hepe05g2063 | 338 | ProSitePatterns | Protein kinases ATP-binding region signature. | 21 | 44 | IPR017441 | GO:0005524(InterPro) | |
Hepe05g2063 | 338 | ProSiteProfiles | NAF domain profile. | 308 | 332 | IPR018451 | GO:0007165(InterPro) | |
Hepe05g2063 | 338 | SMART | serkin_6 | 15 | 270 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe05g2063 | 338 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 134 | 146 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe05g2063 | 338 | PANTHER | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED | 9 | 331 | - | GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER) | |
Hepe05g2063 | 338 | SUPERFAMILY | Protein kinase-like (PK-like) | 12 | 301 | IPR011009 | - | |
Hepe05g2063 | 338 | Gene3D | Transferase(Phosphotransferase) domain 1 | 7 | 326 | - | - | |
Hepe05g2063 | 338 | Pfam | NAF domain | 310 | 334 | IPR004041 | GO:0007165(InterPro) | |
Hepe05g2063 | 338 | FunFam | Non-specific serine/threonine protein kinase | 6 | 94 | - | - | |
Hepe05g2063 | 338 | FunFam | Non-specific serine/threonine protein kinase | 8 | 310 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe05g2063 | Hepe-Chr5:71115157 | Hepe08g0038 | Hepe-Chr8:288362 | 6.23e-166 | dispersed | |
Hepe05g2063 | Hepe-Chr5:71115157 | Hepe07g1747 | Hepe-Chr7:59864705 | 2.93e-167 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72849 | PF00069 | Pkinase | 1.80E-70 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe05g2063 | - | - | - | 0.0 |