Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g2068 ATGAGCGGGAGAGACGACGACTTAGGCCTCAGTTTGAGTTTAGGGTTTCCACTTCAACCTTCTTTTCAGAGGCCCTCCAACTCCATGCATAATCATCATCATCTCCGCAAGACTTCTTGGAATGACCTCTTTCAATTTCCTGATCGAAACGCCGATTCGAGGTCGTTTCTCAGGGGAATCGATGTGAATCGGCTGCCGACGGCCGTGGACGGCGAGGAAGAGAACGGCGTTTCGTCTCCAAACAGTACGATTTCCAGCATCAGTGGAAAGAGGAGCGAGAGAGAAGCGATCGGATCAGACGATGCGGAGGCGGAGGCTGAAGCGGAGGCCGAGAGAGCGTCGTGCTCACGAGGCAGCGACGATGAAGACGGAGGCGGCGACGGCGACGCCTCGAGAAAAAAGCTTAGGCTATCGAAGGAACAGTCGTTGGTTCTTGAGGAAACCTTCAAAGAGCACAATACGCTCAATCCTAAGCAAAAGCTGGCACTTGCAAAGCAGCTGAATCTGAGACCAAGACAAGTGGAGGTGTGGTTTCAAAACAGAAGGGCAAGGACCAAGTTGAAGCAGACAGAAGTGGATTGTGAGTACTTGAAGAGGTGTTGTGAGAATCTAACAGAGGAAAACAGAAGGCTACAGAAGGAGGTGCAAGAGTTAAGAGCACTCAAGCTTTCTCCACAGCTTTATATGCATATGAATCCTCCTACCACACTCACCATGTGCCCTCAGTGTGAGCGTGTGGCCGTTTCCTCGTCTTCTTCGACCTCGGCTGCTCCATCCCGCCATCCGGCAGCGGCTGGTGTGCAGCGTCCCTCGATGACCAACCCGTGGGCGACAATTGAAGATAATGTCTTCAGAATAACGGGAAAGGAAAACGGCCATGTTTTAGCGTTTTCCGCCATTGTAGTTGCAGAAGCTATGCTTATTACTTGCTCAACGCCCTCTCTTTCCTCTGGCCAATCTCTTCCTTACAGGGCGTTTTCAGCATGTGCAATATCAAGAGCTTTCATAACTCAAAACAAGCAAGTTCAGCGCTACTGCTCCTGTCATAGTTTCAATCATAGCAGGGGAGAGAGTTCGTATATATCATTATCAGATGAGAATTCCAGGCGAAAGATTCTTGTATTTTTCTTATCAACTACAGTTTTATTTCCATCTTGGCATTCTTCTGCCAAGACAAAGAGTAACAATCCATATGACGAGAGACGCTTACTAGAGCAAAACAAACGGAGGCAAAGAGAAAACAATGCACCTGATGACTTTCCAAGTTTTGTCAGAGAAGGTTTTGAGGTTAAGGTAGTAGCACCAGAGACCTATGTAAAACGTGACTCTGGACTCATATATTGGGATATTGAAGTTGGTAATGGTGATTTCCCCAAGGATGGTCAGCAGGTGACTTTTCACTATATTGGCTACAATGAGTCTGGTCGTCGAATTGACAGCACATACTTACAGGGTTCTCCCGCCAAAATCCGTGTGGGCACTAATGGATTGGTCCCAGGATTTGAGGAAGGAATTCGAGGCATGAGACCAGGGGGAAAGAGGAGAATAATAATTCCACCAGAACTTGGACCACCGGTGGGGCCTTCCACATTCTTCAGCGCAAAGCAGTTTGAAGTTTTTGATGTGGAATTGTTAAACGTCAAGGATTGTGAGAGGAGGACAATAGGCTTTTACTCTGATATTGTTTGCAGCTAG 1695 47.67 MSGRDDDLGLSLSLGFPLQPSFQRPSNSMHNHHHLRKTSWNDLFQFPDRNADSRSFLRGIDVNRLPTAVDGEEENGVSSPNSTISSISGKRSEREAIGSDDAEAEAEAEAERASCSRGSDDEDGGGDGDASRKKLRLSKEQSLVLEETFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELRALKLSPQLYMHMNPPTTLTMCPQCERVAVSSSSSTSAAPSRHPAAAGVQRPSMTNPWATIEDNVFRITGKENGHVLAFSAIVVAEAMLITCSTPSLSSGQSLPYRAFSACAISRAFITQNKQVQRYCSCHSFNHSRGESSYISLSDENSRRKILVFFLSTTVLFPSWHSSAKTKSNNPYDERRLLEQNKRRQRENNAPDDFPSFVREGFEVKVVAPETYVKRDSGLIYWDIEVGNGDFPKDGQQVTFHYIGYNESGRRIDSTYLQGSPAKIRVGTNGLVPGFEEGIRGMRPGGKRRIIIPPELGPPVGPSTFFSAKQFEVFDVELLNVKDCERRTIGFYSDIVCS 564
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 71174832 71185817 - Hsped.05g20680.1 Hepe05g2068 571333
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g2068 564 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 461 548 IPR001179 GO:0003755(InterPro)
Hepe05g2068 564 MobiDBLite consensus disorder prediction 74 92 - -
Hepe05g2068 564 MobiDBLite consensus disorder prediction 1 33 - -
Hepe05g2068 564 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 457 523 IPR001179 GO:0003755(InterPro)
Hepe05g2068 564 ProSiteProfiles 'Homeobox' domain profile. 128 188 IPR001356 GO:0003677(InterPro)
Hepe05g2068 564 SMART HOX_1 130 192 IPR001356 GO:0003677(InterPro)
Hepe05g2068 564 Pfam Homeodomain 132 186 IPR001356 GO:0003677(InterPro)
Hepe05g2068 564 ProSitePatterns 'Homeobox' domain signature. 163 186 IPR017970 GO:0000981(InterPro)|GO:0006355(InterPro)
Hepe05g2068 564 Pfam HD-ZIP protein N terminus 1 95 IPR006712 GO:0005634(InterPro)
Hepe05g2068 564 Coils Coil 194 224 - -
Hepe05g2068 564 Pfam Homeobox associated leucine zipper 188 222 IPR003106 GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe05g2068 564 SMART halz 188 231 IPR003106 GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe05g2068 564 SUPERFAMILY Homeodomain-like 120 189 IPR009057 -
Hepe05g2068 564 SUPERFAMILY FKBP-like 359 548 - -
Hepe05g2068 564 MobiDBLite consensus disorder prediction 108 135 - -
Hepe05g2068 564 Gene3D - 423 554 IPR046357 GO:0003755(InterPro)
Hepe05g2068 564 CDD homeodomain 132 189 IPR001356 GO:0003677(InterPro)
Hepe05g2068 564 MobiDBLite consensus disorder prediction 69 135 - -
Hepe05g2068 564 CDD bZIP 181 220 - -
Hepe05g2068 564 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 308 564 IPR044239 -
Hepe05g2068 564 Gene3D - 136 186 - -
Hepe05g2068 564 FunFam Homeobox-leucine zipper protein 18 118 193 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g2068 Hepe-Chr5:71174832 Hepe06g1115 Hepe-Chr6:59825483 3.47e-81 dispersed
Hepe05g2068 Hepe-Chr5:71174832 Hepe05g0516 Hepe-Chr5:7049597 9.55e-55 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55701 PF04618 HD-ZIP_N 2.60E-28 No_clan Hepe TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g2068 - - - 0.0