Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g2100 ATGACACAACTTTCACTGGACATGAAGAGGATTCCACTCTCAAAACCGCTTCCATTATTACTCCCCATAGAGATGCTTCCAGAATCAAACCCAAGAGAACTCGCCAAATCCAACCAGGAAGCTGGTCCAAGTTCCTTCTCTGGGGCTACCCACCCTCCAGAGCCCGTTGATGTGGATCTAATCACATCTGTTTATGTACCCATACGCCAAAATAAACCTGACCCCGGCTGCTTGATGAACGGCCCTTTTCTTGAGGATCTTTCAATCAAATCAACCTTACTCGACCAACCCCAACCCCATCCCCATGACTTGCCTCTTTTATCTTCCCCCTTTTCAATTCCAATTCCTCCTGCCTCACAAAATACACAAACCTCTCTTCTTCCCCCAGATTCTGAGGAGAAGGAATGTGTTTGGGATGCTTCTCTCCCCCCAAGTCCACACAGTAGCATTGACAGTAGTGGAGTTCTCACAGCTATGAGCATTGTTAATAGTTGCGCTAGCACATATCCAAGTGATGGAATGGTTAGTATTGAAAGGAACTGTGAGAGTACAAAAGGAAGCATTAGGGGAGGGGACTCTCTCGAGAGTGCAAAAACAAGTATTAGTCGAGCTAGTGATAGCAGTGGTCTTAGTGATGATAGTAGTTGGAGCAACATCACAGGAAGTGCTAATAAGCCCCACAAAGGAAACGATCCTAGGTGGAAAGCCATTCTTGCTATTCGAGCAAGAGATGGAATATTAGGCATGAGCCATTTTAGACTGCTCAAAAGACTTGGATGTGGTGATATTGGTAGTGTTTATCTATCAGAGCTAAGTGGGACTCGCTGTTATTTTGCAATGAAAGTAATGGACAAGGCATCGCTTGCTATCAGGAAGAAGTTAACCAGAGCTCAGACAGAAAGGGAGATCTTGCAGTTACTTGACCATCCATTTCTCCCGACTTTGTACACCCATTTTGAGACTGACAGATTTTCCTGTCTAGTAATGGAGTATTGTCCAGGGGGAGACCTGCACACTTTGAGGCAACGACAACCAGGGAAACACTTCTCTGAGTATGCTGCAAGGTTTTATGCAGCAGAGGTTTTACTGGCCCTAGAATATCTTCACATGCTTGGAGTTGTCTATAGAGACTTGAAACCAGAGAATGTACTGGTTCGTGATGATGGCCACATAATGCTCTCAGATTTCGACCTTTCACTAAGATGTGCAGTTTCACCCACCCTGATAAAAACCTCATACGATTCTGACCCATCAAAACGAGCTGCATTTTGTGTCCAGCCTGCCTGTATTGAGCCGTCATCAGTTTGCATCCAACCTGCATGCTTTATTCCTCGACTCTTCTCTCAGAAAAGCAAAAAGAAAAGTCTGAAGCCTCGAAGTGAGCTGGGGTTCCAATCCAATACACTTCCCGAGCTGGTAGCAGAGCCTACTTCTGCCCGATCCATGTCTTTTGTTGGCACCCATGAATACCTAGCCCCTGAAATTATTAAAGGAGAGGGTCATGGAAGTGCTGTTGATTGGTGGACTTTTGGTATTTTCTTGCATGAACTATTGTATGGGAAAACGCCATTCAAGGGATCGGGAAACAGAGCCACACTATTCAATGTAGTAGGGCAGCAACTGAAGTTCCCAGAGTCTCCAGCAACTAGTTATGCTAGCCGAGATCTTATTAGAGGTTTACTGGTAAAGGAGCCACAGCATAGAGTCGGAGTGAAGAGGGGTGCAACCGAGATCAAGCAACATCCTTTCTTTGAAGGCGTGAATTGGGCGTTGATACGATGCAGCACGCCCCCAGAAGTACCGAGGCCGATGGAGGCGGAAATGCCCAAGTATGGGGTAGTGGAGACAATAGGGGTTGGCAGTGGGAGCAGCAGTAGTAAGAGGATGGTAGGTACAAGTACAACAGATGTTGTTAAGTCTGGTGGTCAATATCTTGACTTCGAGTTCTTTTAA 1953 45.88 MTQLSLDMKRIPLSKPLPLLLPIEMLPESNPRELAKSNQEAGPSSFSGATHPPEPVDVDLITSVYVPIRQNKPDPGCLMNGPFLEDLSIKSTLLDQPQPHPHDLPLLSSPFSIPIPPASQNTQTSLLPPDSEEKECVWDASLPPSPHSSIDSSGVLTAMSIVNSCASTYPSDGMVSIERNCESTKGSIRGGDSLESAKTSISRASDSSGLSDDSSWSNITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLAIRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSYDSDPSKRAAFCVQPACIEPSSVCIQPACFIPRLFSQKSKKKSLKPRSELGFQSNTLPELVAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQHRVGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAEMPKYGVVETIGVGSGSSSSKRMVGTSTTDVVKSGGQYLDFEFF 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 71584084 71589049 + Hsped.05g21000.1 Hepe05g2100 571365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g2100 650 MobiDBLite consensus disorder prediction 113 129 - -
Hepe05g2100 650 SMART serkin_6 252 584 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g2100 650 MobiDBLite consensus disorder prediction 185 225 - -
Hepe05g2100 650 MobiDBLite consensus disorder prediction 30 55 - -
Hepe05g2100 650 Gene3D Phosphorylase Kinase; domain 1 250 335 - -
Hepe05g2100 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 373 385 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe05g2100 650 MobiDBLite consensus disorder prediction 111 132 - -
Hepe05g2100 650 PANTHER FLIPPASE KINASE 1-RELATED 152 621 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Hepe05g2100 650 SUPERFAMILY Protein kinase-like (PK-like) 234 610 IPR011009 -
Hepe05g2100 650 FunFam serine/threonine-protein kinase D6PK-like 479 602 - -
Hepe05g2100 650 ProSiteProfiles Protein kinase domain profile. 252 584 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g2100 650 FunFam serine/threonine-protein kinase D6PK-like 336 403 - -
Hepe05g2100 650 MobiDBLite consensus disorder prediction 185 229 - -
Hepe05g2100 650 Gene3D Transferase(Phosphotransferase) domain 1 479 601 - -
Hepe05g2100 650 FunFam Serine/threonine-protein kinase D6PK-like 250 335 - -
Hepe05g2100 650 Pfam Protein kinase domain 481 584 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g2100 650 Pfam Protein kinase domain 253 403 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe05g2100 650 CDD STKc_phototropin_like 250 603 - -
Hepe05g2100 650 Gene3D Transferase(Phosphotransferase) domain 1 336 407 - -
Hepe05g2100 650 MobiDBLite consensus disorder prediction 32 46 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1697 Hepe-Chr4:72109626 Hepe05g2100 Hepe-Chr5:71584084 2.71e-220 dispersed
Hepe05g2100 Hepe-Chr5:71584084 Hepe08g0238 Hepe-Chr8:2139715 2.78e-168 dispersed
Hepe05g2100 Hepe-Chr5:71584084 Hepe07g1432 Hepe-Chr7:47620532 1.18e-227 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72850 PF00069 Pkinase 4.40E-36 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g2100 - - - 0.0