Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe05g2102 ATGGAAGGATCAGAAAGATCAGGGGTGGTTCCCAATTATGAAGTTCAAGTCTCCTTCCTCTCAAATAATGCACCGCAACAACAACCCATCCACGAAATGGGATTCGTCCACTTCGAAGACCACAACCTGCAGGTCTTGAGCTTCTTAGCCTCCAGTACTACCGCCACCGCCACCGCCACCTCCACCATGCCAGCTTCCTTCACTTCTGCTCACACCCACCTCGTTACTAGACCTTCTTGGAATAACGACCAGGTGGGAACAGTAGATCCAAAGCCTGGGAACGAGGAGAACTGCACTGGTAACGCTAGCGACGGCAGCAATTCGTGGTGGAGAAACTCAAACGCAGATAAGAGCAAAGTGAAGGTAAGGAGAAAGCTGAGAGAGCCGCGTTTCTGTTTCCAGACGAGAAGCGATGTAGATGTCCTCGACGATGGGTATAAATGGAGAAAATATGGCCAAAAAGTCGTCAAGAACAGCCTTCATCCAAGAAGCTACTATCGTTGTACGCATAGCAATTGCAGAGTGAAGAAGAGGGTGGAGAGACTGTCGGAGGATTGTCGGATGGTGATAACAACCTACGAAGGAAGACACAACCACTCCCCTTGCGACGACTCCAACTCATCAGACCACGAACCCTTTACATCCTTCTGA 651 49.77 MEGSERSGVVPNYEVQVSFLSNNAPQQQPIHEMGFVHFEDHNLQVLSFLASSTTATATATSTMPASFTSAHTHLVTRPSWNNDQVGTVDPKPGNEENCTGNASDGSNSWWRNSNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSDHEPFTSF 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 71598058 71599310 - Hsped.05g21020.1 Hepe05g2102 571367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe05g2102 216 MobiDBLite consensus disorder prediction 91 112 - -
Hepe05g2102 216 SMART WRKY_cls 142 201 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe05g2102 216 FunFam WRKY transcription factor 57 128 202 - -
Hepe05g2102 216 ProSiteProfiles WRKY domain profile. 137 199 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe05g2102 216 Gene3D WRKY domain 129 195 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe05g2102 216 MobiDBLite consensus disorder prediction 197 216 - -
Hepe05g2102 216 Pfam WRKY DNA -binding domain 143 199 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe05g2102 216 SUPERFAMILY WRKY DNA-binding domain 134 200 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe05g2102 216 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 67 207 IPR044810 GO:0003700(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3408 Hepe-Chr2:83519531 Hepe05g2102 Hepe-Chr5:71598058 7.86e-34 dispersed
Hepe05g2102 Hepe-Chr5:71598058 Hepe10g0780 Hepe-Chr10:14879773 2.00e-45 dispersed
Hepe05g2102 Hepe-Chr5:71598058 Hepe04g1154 Hepe-Chr4:66707519 1.46e-47 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55706 PF03106 WRKY 1.30E-24 CL0274 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe05g2102 - - - 0.0