Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe06g0015 | ATGAGGAGAGGGAGAGGGGCACCGGCGGCGGCGCCTACGACGGAGCGTGAGCCTGCAACAACCGGATCGGATCGGAGATACAGGGGAGTTCGAAAAAGGCCATGGGGGAGATTTGCGGCGGAGATCAGAGACCCTTGGAAGAAGACCAGAGTTTGGCTTGGCACTTTCGATTCCGCCGAGGACGCCGCCCGTGCTTACGATTCCGCCGCCGTAACCCTCCGTGGTCCCAAAGCTAAAACGAATTTCCCCCTCCCCAATCCAACCTCGTTTTTCGATTACCCTCCCTCCGTCAACGCTCCAGATCCCCGATTTGAAATTAACCCTAACAGACCCACTTCCAGCAGTCTCAGCTCCACCGTCGACTCCTTCAGCGAGCCCCGCCCTCCCTCTACCACCGCCGCCTCCTCTCGCCGCTACCCCCGCACGCCACCCCTCGTCCCAGAAGATTACCATAGCGACTGCGACTCCTCCTCCTCCGTCATCGACGACGGCGATATCGCGTCCTCCTCCGTCATTTCGTATCGGAAACCCCCTCTGCCTTTCGATCTCAACATTCCGCCGTTGGATCATCTTGATTTTGCCGCCGATGATCTTCGATGTACCGCCTTGTGCCTCTGA | 618 | 59.22 | MRRGRGAPAAAPTTEREPATTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDSAAVTLRGPKAKTNFPLPNPTSFFDYPPSVNAPDPRFEINPNRPTSSSLSSTVDSFSEPRPPSTTAASSRRYPRTPPLVPEDYHSDCDSSSSVIDDGDIASSSVISYRKPPLPFDLNIPPLDHLDFAADDLRCTALCL | 205 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 466507 | 467124 | + | Hsped.06g00150.1 | Hepe06g0015 | 571390 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe06g0015 | 205 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 14 | 162 | - | - | |
Hepe06g0015 | 205 | ProSiteProfiles | AP2/ERF domain profile. | 26 | 83 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe06g0015 | 205 | PIRSF | PTI6 | 144 | 201 | IPR017392 | GO:0003700(InterPro) | |
Hepe06g0015 | 205 | PIRSF | PTI6 | 8 | 91 | IPR017392 | GO:0003700(InterPro) | |
Hepe06g0015 | 205 | SMART | rav1_2 | 26 | 89 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe06g0015 | 205 | CDD | AP2 | 26 | 83 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe06g0015 | 205 | Gene3D | AP2/ERF domain | 25 | 84 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe06g0015 | 205 | Pfam | AP2 domain | 26 | 75 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe06g0015 | 205 | SUPERFAMILY | DNA-binding domain | 26 | 84 | IPR016177 | GO:0003677(InterPro) | |
Hepe06g0015 | 205 | MobiDBLite | consensus disorder prediction | 93 | 159 | - | - | |
Hepe06g0015 | 205 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Hepe06g0015 | 205 | PRINTS | Ethylene responsive element binding protein signature | 27 | 38 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe06g0015 | 205 | PRINTS | Ethylene responsive element binding protein signature | 49 | 65 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe06g0015 | 205 | MobiDBLite | consensus disorder prediction | 107 | 138 | - | - | |
Hepe06g0015 | 205 | FunFam | Ethylene-responsive transcription factor 2 | 25 | 84 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g0071 | Hepe-Chr2:841414 | Hepe06g0015 | Hepe-Chr6:466507 | 6.01e-60 | dispersed | |
Hepe06g0015 | Hepe-Chr6:466507 | Hepe08g0590 | Hepe-Chr8:5197278 | 1.90e-60 | dispersed | |
Hepe10g1428 | Hepe-Chr10:50939558 | Hepe06g0015 | Hepe-Chr6:466507 | 3.22e-21 | dispersed | |
Hepe05g0776 | Hepe-Chr5:17887125 | Hepe06g0015 | Hepe-Chr6:466507 | 1.69e-37 | transposed | |
Hepe02g1946 | Hepe-Chr2:33659694 | Hepe06g0015 | Hepe-Chr6:466507 | 3.57e-06 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55709 | PF00847 | AP2 | 2.40E-13 | CL0081 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe06g0015 | K09286 | - | csv:101219993 | 267.7 |